Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13720

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
3,047,225	+		AO353_13710	0.77	+0.1
3,047,226	-		AO353_13710	0.77	+1.0
3,047,226	-		AO353_13710	0.77	-1.0
3,047,268	+		AO353_13710	0.85	+0.6
3,047,302	-				-1.2
3,047,350	+				-0.0
3,047,350	+				-0.2
3,047,350	+				+0.8
3,047,351	-				-0.0
3,047,351	-				-1.4
3,047,351	-				-1.6
3,047,351	-				-0.1
3,047,351	-				-1.3
3,047,352	+				+0.1
3,047,353	-				-0.5
3,047,374	+				+0.7
3,047,374	+				-0.1
3,047,374	+				+0.4
3,047,374	+				+0.6
3,047,374	+				+0.3
3,047,375	-				-1.0
3,047,375	-				-1.1
3,047,396	+				+0.4
3,047,397	-				-1.5
3,047,414	+				-0.1
3,047,414	+				+1.0
3,047,414	+				-1.9
3,047,415	-				-1.0
3,047,415	-				-0.6
3,047,415	-				-1.2
3,047,415	-				-0.8
3,047,442	+				-0.8
3,047,442	+				-0.6
3,047,442	+				-0.4
3,047,442	+				+0.5
3,047,442	+				+0.1
3,047,443	-				-1.5
3,047,443	-				-2.5
3,047,443	-				-0.7
3,047,455	+				-0.2
3,047,456	-				-0.6
3,047,456	-				-0.8
3,047,515	+				+0.3
3,047,516	-				-0.3
3,047,519	+				+1.4
3,047,519	+				-1.4
3,047,520	-				-1.6
3,047,520	-				-1.7
3,047,520	-				-0.1
3,047,660	+		AO353_13715	0.12	-0.8
3,047,660	+		AO353_13715	0.12	+0.1
3,047,697	+		AO353_13715	0.22	+0.9
3,047,698	-		AO353_13715	0.22	+0.9
3,047,698	-		AO353_13715	0.22	-0.9
3,047,933	+		AO353_13715	0.85	+1.8
3,047,933	+		AO353_13715	0.85	-0.0
3,047,933	+		AO353_13715	0.85	+2.0
3,047,933	+		AO353_13715	0.85	+0.7
3,047,933	+		AO353_13715	0.85	+2.8
3,047,934	-		AO353_13715	0.85	+0.6
3,048,087	+				-0.3
3,048,112	+				-1.1
3,048,148	+				+3.0
3,048,148	+				+0.2
3,048,149	-				-1.8
3,048,149	-				-1.0
3,048,149	-				+0.4
3,048,194	-				-2.6
3,048,194	-				-0.8
3,048,194	-				-0.5
3,048,194	-				-1.4
3,048,195	+				+0.6
3,048,196	-				-1.6
3,048,196	-				+0.2
3,048,196	-				-1.8
3,048,196	-				-2.7
3,048,214	+				-1.8
3,048,300	+				-2.3
3,048,329	-				-0.9
3,048,362	+				-0.6
3,048,502	-		AO353_13720	0.15	+3.0
3,048,513	+		AO353_13720	0.16	-1.3
3,048,513	+		AO353_13720	0.16	+0.7
3,048,513	+		AO353_13720	0.16	-1.5
3,048,513	+		AO353_13720	0.16	-2.2
3,048,513	+		AO353_13720	0.16	-0.5
3,048,514	-		AO353_13720	0.16	-1.9
3,048,514	-		AO353_13720	0.16	-1.1
3,048,514	-		AO353_13720	0.16	-1.2
3,048,514	-		AO353_13720	0.16	-0.8
3,048,675	+		AO353_13720	0.24	-2.5
3,048,676	-		AO353_13720	0.25	-2.5
3,049,002	+		AO353_13720	0.42	+0.1
3,049,033	-		AO353_13720	0.43	-2.0
3,049,035	+		AO353_13720	0.43	-0.5
3,049,035	+		AO353_13720	0.43	-1.6
3,049,036	-		AO353_13720	0.43	-1.5
3,049,104	+		AO353_13720	0.47	-1.1
3,049,104	+		AO353_13720	0.47	-0.6
3,049,112	+		AO353_13720	0.47	-0.7
3,049,143	+		AO353_13720	0.49	-0.8
3,049,143	+		AO353_13720	0.49	-1.7
3,049,144	-		AO353_13720	0.49	-0.5
3,049,144	-		AO353_13720	0.49	-1.8
3,049,144	-		AO353_13720	0.49	-1.7
3,049,144	-		AO353_13720	0.49	-1.7
3,049,144	-		AO353_13720	0.49	-2.1
3,049,144	-		AO353_13720	0.49	-2.4
3,049,159	-		AO353_13720	0.50	+0.4
3,049,408	-		AO353_13720	0.63	-0.0
3,049,425	+		AO353_13720	0.64	-1.8
3,049,425	+		AO353_13720	0.64	-1.8
3,049,425	+		AO353_13720	0.64	-2.1
3,049,425	+		AO353_13720	0.64	-1.5
3,049,425	+		AO353_13720	0.64	-1.5
3,049,425	+		AO353_13720	0.64	-1.0
3,049,425	+		AO353_13720	0.64	-1.2
3,049,425	+		AO353_13720	0.64	-1.8
3,049,425	+		AO353_13720	0.64	+0.2
3,049,425	+		AO353_13720	0.64	-2.3
3,049,425	+		AO353_13720	0.64	-0.5
3,049,425	+		AO353_13720	0.64	-0.2
3,049,425	+		AO353_13720	0.64	-0.3
3,049,426	-		AO353_13720	0.64	-1.7
3,049,426	-		AO353_13720	0.64	-1.5
3,049,426	-		AO353_13720	0.64	-2.3
3,049,426	-		AO353_13720	0.64	-1.0
3,049,426	-		AO353_13720	0.64	-1.9
3,049,426	-		AO353_13720	0.64	+0.9
3,049,426	-		AO353_13720	0.64	-0.0
3,049,426	-		AO353_13720	0.64	-1.9
3,049,426	-		AO353_13720	0.64	-1.2
3,049,426	-		AO353_13720	0.64	-2.6
3,049,426	-		AO353_13720	0.64	-0.6
3,049,426	-		AO353_13720	0.64	-2.6
3,049,426	-		AO353_13720	0.64	-0.9
3,049,426	-		AO353_13720	0.64	-1.2
3,049,426	-		AO353_13720	0.64	-1.0
3,049,427	+		AO353_13720	0.64	-1.3
3,049,427	+		AO353_13720	0.64	-1.9
3,049,427	+		AO353_13720	0.64	-0.9
3,049,427	+		AO353_13720	0.64	+0.2
3,049,427	+		AO353_13720	0.64	-0.2
3,049,427	+		AO353_13720	0.64	+0.2
3,049,427	+		AO353_13720	0.64	-1.3
3,049,427	+		AO353_13720	0.64	-2.1
3,049,428	-		AO353_13720	0.64	-2.4
3,049,428	-		AO353_13720	0.64	-1.7
3,049,428	-		AO353_13720	0.64	-0.8
3,049,428	-		AO353_13720	0.64	-0.6
3,049,428	-		AO353_13720	0.64	-2.3
3,049,428	-		AO353_13720	0.64	-1.4
3,049,428	-		AO353_13720	0.64	-0.3
3,049,428	-		AO353_13720	0.64	-1.1
3,049,450	-		AO353_13720	0.65	-2.8
3,049,450	-		AO353_13720	0.65	-1.7
3,049,500	+		AO353_13720	0.68	-0.9
3,049,500	+		AO353_13720	0.68	-2.0
3,049,500	+		AO353_13720	0.68	-2.6
3,049,500	+		AO353_13720	0.68	-1.1
3,049,501	-		AO353_13720	0.68	-1.6
3,049,501	-		AO353_13720	0.68	-1.2
3,049,501	-		AO353_13720	0.68	-1.9
3,049,501	-		AO353_13720	0.68	-1.6
3,049,599	+		AO353_13720	0.73	-0.0
3,049,599	+		AO353_13720	0.73	-0.7
3,049,599	+		AO353_13720	0.73	-1.6
3,049,599	+		AO353_13720	0.73	-0.8
3,049,599	+		AO353_13720	0.73	-2.5
3,049,599	+		AO353_13720	0.73	+0.8
3,049,599	+		AO353_13720	0.73	-0.0
3,049,599	+		AO353_13720	0.73	-2.2
3,049,599	+		AO353_13720	0.73	-0.9
3,049,599	+		AO353_13720	0.73	-1.3
3,049,599	+		AO353_13720	0.73	-2.2
3,049,600	-		AO353_13720	0.73	-2.0
3,049,600	-		AO353_13720	0.73	-2.2
3,049,600	-		AO353_13720	0.73	-0.3
3,049,600	-		AO353_13720	0.73	-0.4
3,049,600	-		AO353_13720	0.73	-1.7
3,049,600	-		AO353_13720	0.73	-0.2
3,049,600	-		AO353_13720	0.73	-0.9
3,049,600	-		AO353_13720	0.73	-1.0
3,049,600	-		AO353_13720	0.73	-3.5
3,049,600	-		AO353_13720	0.73	-2.5
3,049,600	-		AO353_13720	0.73	-2.3
3,049,600	-		AO353_13720	0.73	-0.3
3,049,600	-		AO353_13720	0.73	-2.0
3,049,600	-		AO353_13720	0.73	-1.6
3,049,600	-		AO353_13720	0.73	-2.1
3,049,600	-		AO353_13720	0.73	-1.4
3,049,600	-		AO353_13720	0.73	-1.2
3,049,600	-		AO353_13720	0.73	+0.6
3,049,600	-		AO353_13720	0.73	-1.8
3,049,755	+		AO353_13720	0.81	-0.3
3,049,755	+		AO353_13720	0.81	-1.3
3,049,755	+		AO353_13720	0.81	-2.3
3,049,755	+		AO353_13720	0.81	-0.7
3,049,755	+		AO353_13720	0.81	-1.0
3,049,755	+		AO353_13720	0.81	+0.0
3,049,755	+		AO353_13720	0.81	-0.6
3,049,755	+		AO353_13720	0.81	-1.3
3,049,755	+		AO353_13720	0.81	-0.6
3,049,755	+		AO353_13720	0.81	-0.8
3,049,756	-		AO353_13720	0.81	-0.2
3,049,756	-		AO353_13720	0.81	-0.9
3,049,756	-		AO353_13720	0.81	-1.2
3,049,756	-		AO353_13720	0.81	-0.2
3,049,756	-		AO353_13720	0.81	-3.7
3,049,756	-		AO353_13720	0.81	+0.4
3,049,818	+		AO353_13720	0.84	-1.3
3,049,818	+		AO353_13720	0.84	-2.3
3,049,818	+		AO353_13720	0.84	-1.2
3,049,818	+		AO353_13720	0.84	-1.3
3,049,818	+		AO353_13720	0.84	-2.5
3,049,848	+		AO353_13720	0.86	-1.2
3,049,901	-		AO353_13720	0.89	-1.4
3,049,908	+		AO353_13720	0.89	-1.5
3,049,908	+		AO353_13720	0.89	-2.4
3,049,909	-		AO353_13720	0.89	-0.6
3,049,932	+				-0.1
3,049,981	-				-0.9
3,049,981	-				-2.4
3,049,981	-				-1.8
3,049,981	-				-1.5
3,050,067	+				-1.5
3,050,106	+				-1.3
3,050,106	+				-1.0
3,050,106	+				-1.6
3,050,106	+				+2.0
3,050,107	-				-2.9
3,050,107	-				-0.6
3,050,107	-				-1.3
3,050,107	-				-2.3
3,050,156	-				-1.5
3,050,156	-				-1.3
3,050,165	-				-2.3
3,050,204	-				+1.8
3,050,265	-				-0.0
3,050,276	+				+0.7
3,050,276	+				-2.3
3,050,276	+				+0.1
3,050,276	+				+0.3
3,050,276	+				-1.2
3,050,277	-				-0.7
3,050,283	+				+0.3
3,050,283	+				-1.0
3,050,283	+				-1.0
3,050,283	+				+0.2
3,050,283	+				+1.5
3,050,284	-				-0.3
3,050,296	+				-2.3
3,050,296	+				-0.9
3,050,296	+				+0.8
3,050,296	+				+1.8
3,050,297	-				-0.0
3,050,297	-				+0.2
3,050,297	-				-0.0
3,050,341	+				-2.0
3,050,395	-				-0.7
3,050,531	+		AO353_13725	0.13	+0.3
3,050,531	+		AO353_13725	0.13	+0.4
3,050,532	-		AO353_13725	0.13	+0.6
3,050,715	+		AO353_13725	0.26	+0.9
3,050,715	+		AO353_13725	0.26	-0.8
3,050,716	-		AO353_13725	0.26	-0.3
3,050,716	-		AO353_13725	0.26	-0.0
3,050,733	+		AO353_13725	0.27	-2.0
3,050,733	+		AO353_13725	0.27	+1.6
3,050,733	+		AO353_13725	0.27	-1.2
3,050,733	+		AO353_13725	0.27	-0.7
3,050,733	+		AO353_13725	0.27	-2.3
3,050,733	+		AO353_13725	0.27	-0.1
3,050,733	+		AO353_13725	0.27	+0.2
3,050,799	-		AO353_13725	0.32	-0.9
3,050,885	+		AO353_13725	0.38	+0.3
3,050,886	-		AO353_13725	0.38	+1.1
3,050,886	-		AO353_13725	0.38	+0.1