Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13515

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
3,000,147	+		AO353_13505	0.18	-0.7
3,000,162	+		AO353_13505	0.21	-0.1
3,000,162	+		AO353_13505	0.21	-0.9
3,000,162	+		AO353_13505	0.21	+0.3
3,000,163	-		AO353_13505	0.21	-0.0
3,000,163	-		AO353_13505	0.21	-0.2
3,000,163	-		AO353_13505	0.21	+0.9
3,000,201	+		AO353_13505	0.28	-2.9
3,000,201	+		AO353_13505	0.28	-1.2
3,000,202	-		AO353_13505	0.28	+0.4
3,000,202	-		AO353_13505	0.28	+0.2
3,000,438	+		AO353_13505	0.73	+0.3
3,000,438	+		AO353_13505	0.73	-1.5
3,000,535	-				+1.4
3,000,535	-				-0.2
3,000,588	+				-1.5
3,000,588	+				-0.2
3,000,588	+				+1.0
3,000,588	+				-1.9
3,000,588	+				+0.8
3,000,588	+				+0.7
3,000,588	+				+0.9
3,000,588	+				+0.4
3,000,588	+				-0.0
3,000,588	+				-0.0
3,000,588	+				+0.7
3,000,588	+				+0.6
3,000,588	+				+0.2
3,000,589	-				+0.7
3,000,589	-				-0.7
3,000,589	-				-2.1
3,000,589	-				+1.0
3,000,589	-				+1.1
3,000,589	-				-2.3
3,000,589	-				-3.1
3,000,589	-				-2.3
3,000,589	-				+0.2
3,000,589	-				+0.4
3,000,589	-				-1.5
3,000,589	-				-1.3
3,000,778	+		AO353_13510	0.35	-0.0
3,000,779	-		AO353_13510	0.35	-0.5
3,000,779	-		AO353_13510	0.35	+1.6
3,000,779	-		AO353_13510	0.35	+1.1
3,000,806	+		AO353_13510	0.40	+0.9
3,000,806	+		AO353_13510	0.40	-0.4
3,000,807	-		AO353_13510	0.41	-0.4
3,000,807	-		AO353_13510	0.41	+1.5
3,000,807	-		AO353_13510	0.41	-0.3
3,000,807	-		AO353_13510	0.41	-0.2
3,000,807	-		AO353_13510	0.41	-0.0
3,000,858	+		AO353_13510	0.50	-1.2
3,000,859	-		AO353_13510	0.50	+0.2
3,000,859	-		AO353_13510	0.50	+2.3
3,000,859	-		AO353_13510	0.50	-0.7
3,000,859	-		AO353_13510	0.50	-1.3
3,000,859	-		AO353_13510	0.50	-1.2
3,000,922	-		AO353_13510	0.62	-1.2
3,001,065	+		AO353_13510	0.89	+1.1
3,001,065	+		AO353_13510	0.89	-0.5
3,001,065	+		AO353_13510	0.89	+1.7
3,001,065	+		AO353_13510	0.89	-1.0
3,001,065	+		AO353_13510	0.89	-0.7
3,001,065	+		AO353_13510	0.89	+0.4
3,001,065	+		AO353_13510	0.89	+1.5
3,001,065	+		AO353_13510	0.89	+0.1
3,001,066	-		AO353_13510	0.89	+2.0
3,001,066	-		AO353_13510	0.89	-0.2
3,001,095	+				+0.5
3,001,095	+				+0.6
3,001,096	-				+0.7
3,001,097	+				-1.0
3,001,098	-				+0.1
3,001,116	+				-1.3
3,001,116	+				-0.1
3,001,116	+				-0.5
3,001,116	+				-0.0
3,001,116	+				-0.1
3,001,116	+				-0.1
3,001,116	+				-0.7
3,001,117	-				+0.8
3,001,117	-				+0.3
3,001,117	-				+0.1
3,001,117	-				+0.4
3,001,117	-				-2.3
3,001,117	-				+0.2
3,001,117	-				+0.1
3,001,117	-				+0.2
3,001,260	+		AO353_13515	0.42	-1.2
3,001,323	+		AO353_13515	0.63	-1.7
3,001,323	+		AO353_13515	0.63	-2.4
3,001,323	+		AO353_13515	0.63	-0.6
3,001,323	+		AO353_13515	0.63	-1.0
3,001,323	+		AO353_13515	0.63	+0.5
3,001,323	+		AO353_13515	0.63	-0.8
3,001,323	+		AO353_13515	0.63	+1.3
3,001,324	-		AO353_13515	0.63	-0.8
3,001,324	-		AO353_13515	0.63	+1.4
3,001,324	-		AO353_13515	0.63	-1.8
3,001,324	-		AO353_13515	0.63	+0.6
3,001,324	-		AO353_13515	0.63	-1.2
3,001,324	-		AO353_13515	0.63	-2.2
3,001,342	-		AO353_13515	0.69	-2.3
3,001,439	+				+0.9
3,001,480	-				+0.1
3,001,510	-				-1.5
3,001,563	+				-0.0
3,001,563	+				-1.5
3,001,563	+				-0.5
3,001,564	-				-0.3
3,001,564	-				+1.4
3,001,564	-				-1.1
3,001,569	+				+0.5
3,001,569	+				+0.3
3,001,569	+				-0.5
3,001,569	+				-0.9
3,001,569	+				-0.3
3,001,569	+				+1.3
3,001,569	+				+1.2
3,001,569	+				-0.0
3,001,569	+				-1.3
3,001,569	+				+1.6
3,001,569	+				+0.1
3,001,569	+				-1.1
3,001,569	+				+0.3
3,001,569	+				-0.1
3,001,569	+				+1.4
3,001,569	+				-0.3
3,001,569	+				-1.7
3,001,569	+				+0.3
3,001,569	+				+0.9
3,001,569	+				+1.0
3,001,570	-				-0.1
3,001,570	-				-1.5
3,001,570	-				-0.5
3,001,570	-				+1.3
3,001,570	-				+2.3
3,001,570	-				+1.3
3,001,570	-				+0.9
3,001,570	-				+1.0
3,001,570	-				-0.1
3,001,570	-				+1.0
3,001,570	-				-0.2
3,001,570	-				-0.0
3,001,570	-				-0.3
3,001,570	-				-0.1
3,001,570	-				-0.3
3,001,570	-				+0.6
3,001,570	-				-1.0
3,001,590	+				+0.4
3,001,590	+				-0.1
3,001,591	-				-0.0
3,001,611	-				+1.0
3,001,702	-		AO353_13520	0.15	+0.4
3,001,767	+		AO353_13520	0.23	-0.8
3,001,767	+		AO353_13520	0.23	+1.0
3,001,984	+		AO353_13520	0.48	+0.6
3,001,984	+		AO353_13520	0.48	-2.0
3,001,984	+		AO353_13520	0.48	+0.4
3,001,984	+		AO353_13520	0.48	+0.1
3,001,984	+		AO353_13520	0.48	-0.7
3,001,984	+		AO353_13520	0.48	-0.2
3,001,984	+		AO353_13520	0.48	+0.6
3,001,985	-		AO353_13520	0.48	-0.2
3,001,985	-		AO353_13520	0.48	+0.4
3,001,985	-		AO353_13520	0.48	+0.9
3,001,985	-		AO353_13520	0.48	-0.8
3,002,116	+		AO353_13520	0.64	-0.5
3,002,116	+		AO353_13520	0.64	-1.3
3,002,116	+		AO353_13520	0.64	-1.8
3,002,117	-		AO353_13520	0.64	-2.2
3,002,117	-		AO353_13520	0.64	-2.0
3,002,279	-		AO353_13520	0.83	+0.1
3,002,279	-		AO353_13520	0.83	+1.3
3,002,279	-		AO353_13520	0.83	-0.6
3,002,279	-		AO353_13520	0.83	-1.1
3,002,417	+				+1.0
3,002,418	-				-1.7
3,002,418	-				-0.0
3,002,419	+				+1.3
3,002,419	+				+0.3
3,002,420	-				+0.3
3,002,420	-				+0.5
3,002,420	-				+0.4
3,002,420	-				+0.9
3,002,420	-				-0.6
3,002,425	+				+0.4
3,002,425	+				-1.7
3,002,425	+				-1.1
3,002,426	-				+1.5
3,002,426	-				+0.3
3,002,426	-				-0.0
3,002,426	-				-2.2
3,002,429	+				-0.6
3,002,429	+				-0.2
3,002,429	+				+1.0