Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12675

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
2,789,352	+		AO353_12670	0.10	+1.4
2,789,353	-		AO353_12670	0.11	-0.5
2,789,353	-		AO353_12670	0.11	-0.9
2,789,405	+		AO353_12670	0.18	-0.3
2,789,621	+		AO353_12670	0.47	+0.8
2,789,621	+		AO353_12670	0.47	-0.7
2,789,622	-		AO353_12670	0.47	-2.5
2,789,622	-		AO353_12670	0.47	+0.2
2,789,622	-		AO353_12670	0.47	+1.1
2,789,622	-		AO353_12670	0.47	-1.5
2,789,651	+		AO353_12670	0.51	-0.2
2,789,978	+				-0.7
2,789,978	+				-1.0
2,789,978	+				+0.1
2,789,979	-				-0.8
2,789,979	-				-1.0
2,789,979	-				+1.0
2,790,003	+				+0.5
2,790,004	-				+1.3
2,790,184	+				-0.2
2,790,184	+				+1.0
2,790,184	+				-0.8
2,790,184	+				+0.2
2,790,185	-				-0.3
2,790,185	-				+0.9
2,790,185	-				-1.5
2,790,185	-				-1.6
2,790,191	-				+0.1
2,790,191	-				-0.1
2,790,210	+				-1.9
2,790,210	+				+0.2
2,790,259	+				+1.2
2,790,259	+				-1.4
2,790,260	-				-0.7
2,790,260	-				+0.7
2,790,260	-				+0.1
2,790,426	+		AO353_12675	0.14	-0.9
2,790,426	+		AO353_12675	0.14	-0.7
2,790,427	-		AO353_12675	0.14	+0.1
2,790,457	+		AO353_12675	0.16	-1.5
2,790,457	+		AO353_12675	0.16	-0.9
2,790,457	+		AO353_12675	0.16	-0.3
2,790,457	+		AO353_12675	0.16	-0.2
2,790,458	-		AO353_12675	0.16	+0.1
2,790,458	-		AO353_12675	0.16	-0.5
2,790,458	-		AO353_12675	0.16	+0.3
2,790,522	+		AO353_12675	0.20	-0.9
2,790,522	+		AO353_12675	0.20	+0.4
2,790,522	+		AO353_12675	0.20	+0.1
2,790,522	+		AO353_12675	0.20	-0.2
2,790,522	+		AO353_12675	0.20	-0.7
2,790,522	+		AO353_12675	0.20	+0.4
2,790,522	+		AO353_12675	0.20	-1.9
2,790,522	+		AO353_12675	0.20	+0.1
2,790,522	+		AO353_12675	0.20	+1.4
2,790,523	-		AO353_12675	0.20	-1.3
2,790,523	-		AO353_12675	0.20	+0.4
2,790,523	-		AO353_12675	0.20	+0.9
2,790,523	-		AO353_12675	0.20	-1.0
2,790,523	-		AO353_12675	0.20	+0.1
2,790,929	+		AO353_12675	0.44	+0.8
2,790,955	+		AO353_12675	0.46	-0.8
2,790,955	+		AO353_12675	0.46	+0.1
2,790,956	-		AO353_12675	0.46	-1.5
2,791,345	+		AO353_12675	0.69	-0.8
2,791,345	+		AO353_12675	0.69	-0.9
2,791,345	+		AO353_12675	0.69	-0.2
2,791,345	+		AO353_12675	0.69	+0.7
2,791,346	-		AO353_12675	0.69	-1.8
2,791,346	-		AO353_12675	0.69	+0.9
2,791,346	-		AO353_12675	0.69	+0.7
2,791,346	-		AO353_12675	0.69	-1.3
2,791,346	-		AO353_12675	0.69	-0.7
2,791,346	-		AO353_12675	0.69	-0.5
2,791,724	+				+1.2
2,791,724	+				-0.1
2,791,724	+				-1.3
2,791,827	+				+1.7
2,791,827	+				-0.7
2,791,827	+				-2.0
2,791,828	-				-1.2
2,791,892	+				+1.3
2,791,892	+				-0.8
2,791,892	+				+1.3
2,791,893	-				+1.1
2,791,933	-		AO353_12680	0.12	+0.8
2,791,950	+		AO353_12680	0.16	+0.1
2,791,950	+		AO353_12680	0.16	+0.0
2,791,950	+		AO353_12680	0.16	+0.1
2,791,950	+		AO353_12680	0.16	-0.3
2,791,950	+		AO353_12680	0.16	-0.2
2,791,950	+		AO353_12680	0.16	-0.7
2,791,950	+		AO353_12680	0.16	-0.2
2,791,951	-		AO353_12680	0.16	+1.1
2,791,951	-		AO353_12680	0.16	+1.0
2,791,951	-		AO353_12680	0.16	+0.9
2,791,951	-		AO353_12680	0.16	+1.2
2,792,008	+		AO353_12680	0.26	-0.0
2,792,052	+		AO353_12680	0.34	-1.2
2,792,052	+		AO353_12680	0.34	+0.3
2,792,052	+		AO353_12680	0.34	+1.2
2,792,052	+		AO353_12680	0.34	+0.7
2,792,052	+		AO353_12680	0.34	-0.5
2,792,053	-		AO353_12680	0.34	-1.5
2,792,053	-		AO353_12680	0.34	-0.4
2,792,053	-		AO353_12680	0.34	+0.4
2,792,053	-		AO353_12680	0.34	-1.2
2,792,349	+		AO353_12680	0.89	+1.0
2,792,349	+		AO353_12680	0.89	-0.5
2,792,364	+				-0.7
2,792,365	-				-1.6
2,792,432	+				-0.6
2,792,432	+				+0.3
2,792,433	-		AO353_12685	0.10	-0.5
2,792,564	+		AO353_12685	0.62	+1.1
2,792,769	-		AO353_12690	0.38	+0.4