Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11850

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
2,613,371	+		AO353_11840	0.56	+0.3
2,613,466	+		AO353_11840	0.70	+1.1
2,613,466	+		AO353_11840	0.70	-0.6
2,613,592	+		AO353_11840	0.89	+1.0
2,613,592	+		AO353_11840	0.89	+0.9
2,613,621	-				+1.5
2,613,701	+				+1.0
2,613,723	+				-0.7
2,613,723	+				-0.2
2,613,725	+				+1.1
2,613,725	+				-0.6
2,613,725	+				+0.2
2,613,725	+				+1.4
2,613,725	+				+0.1
2,613,725	+				-0.4
2,613,725	+				-0.0
2,613,725	+				+1.1
2,613,725	+				-1.3
2,613,725	+				-0.5
2,613,725	+				+0.2
2,613,725	+				-0.3
2,613,725	+				+1.7
2,613,726	-				-2.1
2,613,726	-				+1.4
2,613,726	-				-0.6
2,613,726	-				+0.4
2,613,726	-				-0.0
2,613,726	-				+1.3
2,613,726	-				-0.7
2,613,726	-				-0.1
2,613,726	-				-0.6
2,613,773	+				+1.2
2,613,773	+				+1.0
2,613,773	+				+1.3
2,613,773	+				+1.2
2,613,774	-				-0.3
2,613,774	-				-1.0
2,613,774	-				+0.6
2,613,774	-				-0.3
2,613,774	-				-0.5
2,613,774	-				+0.4
2,613,774	-				-1.7
2,613,774	-				-0.1
2,613,774	-				-0.6
2,613,774	-				-1.3
2,613,774	-				-1.6
2,613,774	-				-1.8
2,613,776	+				-1.1
2,613,777	-				+1.7
2,613,777	-				+1.0
2,613,859	+		AO353_11845	0.19	+1.0
2,613,859	+		AO353_11845	0.19	-0.7
2,613,859	+		AO353_11845	0.19	-0.0
2,613,859	+		AO353_11845	0.19	+0.9
2,613,859	+		AO353_11845	0.19	+1.3
2,613,859	+		AO353_11845	0.19	-0.3
2,613,859	+		AO353_11845	0.19	-0.8
2,613,860	-		AO353_11845	0.19	+0.4
2,613,860	-		AO353_11845	0.19	+1.5
2,613,860	-		AO353_11845	0.19	-0.3
2,613,860	-		AO353_11845	0.19	+0.3
2,613,860	-		AO353_11845	0.19	-0.1
2,613,860	-		AO353_11845	0.19	+0.8
2,613,860	-		AO353_11845	0.19	-1.4
2,613,860	-		AO353_11845	0.19	+2.0
2,613,899	+		AO353_11845	0.26	-0.1
2,613,899	+		AO353_11845	0.26	+0.8
2,613,899	+		AO353_11845	0.26	+0.1
2,613,900	-		AO353_11845	0.26	-0.3
2,613,900	-		AO353_11845	0.26	-0.7
2,613,949	+		AO353_11845	0.34	+0.0
2,613,950	-		AO353_11845	0.35	-0.3
2,613,950	-		AO353_11845	0.35	-2.6
2,613,950	-		AO353_11845	0.35	-0.5
2,613,970	+		AO353_11845	0.38	+1.3
2,613,970	+		AO353_11845	0.38	-0.8
2,613,970	+		AO353_11845	0.38	-0.0
2,613,971	-		AO353_11845	0.38	+1.3
2,613,971	-		AO353_11845	0.38	+1.2
2,614,108	+		AO353_11845	0.62	-0.9
2,614,108	+		AO353_11845	0.62	+0.4
2,614,108	+		AO353_11845	0.62	+0.1
2,614,108	+		AO353_11845	0.62	-0.7
2,614,109	-		AO353_11845	0.63	-1.4
2,614,109	-		AO353_11845	0.63	-0.7
2,614,109	-		AO353_11845	0.63	+0.4
2,614,109	-		AO353_11845	0.63	+0.9
2,614,110	+		AO353_11845	0.63	-0.6
2,614,110	+		AO353_11845	0.63	-0.3
2,614,110	+		AO353_11845	0.63	-1.5
2,614,110	+		AO353_11845	0.63	-1.1
2,614,110	+		AO353_11845	0.63	+1.0
2,614,110	+		AO353_11845	0.63	-0.6
2,614,110	+		AO353_11845	0.63	+1.5
2,614,111	-		AO353_11845	0.63	+1.2
2,614,111	-		AO353_11845	0.63	-0.5
2,614,111	-		AO353_11845	0.63	+0.2
2,614,111	-		AO353_11845	0.63	+0.9
2,614,111	-		AO353_11845	0.63	+0.6
2,614,111	-		AO353_11845	0.63	-0.1
2,614,111	-		AO353_11845	0.63	-0.6
2,614,111	-		AO353_11845	0.63	-1.2
2,614,111	-		AO353_11845	0.63	-1.4
2,614,111	-		AO353_11845	0.63	-0.0
2,614,111	-		AO353_11845	0.63	-1.0
2,614,111	-		AO353_11845	0.63	+2.0
2,614,111	-		AO353_11845	0.63	-0.3
2,614,150	+		AO353_11845	0.70	-0.2
2,614,150	+		AO353_11845	0.70	-0.1
2,614,273	+				-0.3
2,614,274	-				+0.0
2,614,274	-				-0.4
2,614,274	-				-1.4
2,614,289	+				+1.0
2,614,289	+				-1.0
2,614,290	-				+1.2
2,614,290	-				+1.2
2,614,290	-				+1.1
2,614,681	+		AO353_11850	0.43	-1.3
2,614,681	+		AO353_11850	0.43	-2.1
2,614,682	-		AO353_11850	0.44	-2.1
2,614,710	+		AO353_11850	0.47	-1.1
2,614,710	+		AO353_11850	0.47	-2.8
2,614,710	+		AO353_11850	0.47	+0.9
2,614,710	+		AO353_11850	0.47	+0.1
2,614,711	-		AO353_11850	0.47	-0.2
2,614,786	+		AO353_11850	0.56	-0.4
2,614,787	-		AO353_11850	0.56	-0.1
2,614,787	-		AO353_11850	0.56	+0.2
2,614,787	-		AO353_11850	0.56	+0.8
2,614,787	-		AO353_11850	0.56	+0.8
2,614,787	-		AO353_11850	0.56	-1.1
2,614,787	-		AO353_11850	0.56	+0.1
2,615,059	-		AO353_11850	0.89	-1.1
2,615,210	+				+0.4
2,615,213	+				-0.7
2,615,213	+				-2.1
2,615,213	+				-1.5
2,615,213	+				+1.9
2,615,213	+				-2.1
2,615,213	+				+0.3
2,615,230	-				+0.6
2,615,257	-				+0.1
2,615,320	+				+0.0
2,615,320	+				-1.4
2,615,320	+				+1.2
2,615,320	+				-0.6
2,615,320	+				+0.4
2,615,320	+				+2.8
2,615,320	+				-0.0
2,615,320	+				+0.6
2,615,320	+				+0.1
2,615,321	-				+0.4
2,615,321	-				+2.6
2,615,321	-				-2.0
2,615,321	-				-0.0
2,615,321	-				+1.0
2,615,321	-				-0.8
2,615,321	-				-0.8
2,615,321	-				+0.8
2,615,321	-				-1.3
2,615,321	-				+2.1
2,615,321	-				+0.5
2,615,321	-				-0.4
2,615,321	-				-0.2
2,615,321	-				-1.1
2,615,321	-				-0.1
2,615,375	+		AO353_11855	0.16	-1.5
2,615,375	+		AO353_11855	0.16	-0.6
2,615,375	+		AO353_11855	0.16	+0.9
2,615,375	+		AO353_11855	0.16	-1.7
2,615,375	+		AO353_11855	0.16	+0.7
2,615,375	+		AO353_11855	0.16	+0.4
2,615,375	+		AO353_11855	0.16	+1.8
2,615,375	+		AO353_11855	0.16	-0.1
2,615,375	+		AO353_11855	0.16	+0.1
2,615,375	+		AO353_11855	0.16	-0.5
2,615,375	+		AO353_11855	0.16	+1.4
2,615,375	+		AO353_11855	0.16	-1.4
2,615,375	+		AO353_11855	0.16	-0.6
2,615,375	+		AO353_11855	0.16	-1.3
2,615,375	+		AO353_11855	0.16	+0.1
2,615,376	-		AO353_11855	0.16	+0.4
2,615,376	-		AO353_11855	0.16	+1.5
2,615,376	-		AO353_11855	0.16	+1.0
2,615,376	-		AO353_11855	0.16	+0.3
2,615,376	-		AO353_11855	0.16	+0.6
2,615,376	-		AO353_11855	0.16	+0.2
2,615,376	-		AO353_11855	0.16	-0.4
2,615,376	-		AO353_11855	0.16	-1.6
2,615,376	-		AO353_11855	0.16	-0.1
2,615,376	-		AO353_11855	0.16	+0.3
2,615,376	-		AO353_11855	0.16	+1.0
2,615,376	-		AO353_11855	0.16	+1.4
2,615,376	-		AO353_11855	0.16	+1.3
2,615,410	+		AO353_11855	0.23	-1.4
2,615,410	+		AO353_11855	0.23	+0.1
2,615,410	+		AO353_11855	0.23	-0.4
2,615,410	+		AO353_11855	0.23	-0.1
2,615,410	+		AO353_11855	0.23	-0.1
2,615,410	+		AO353_11855	0.23	+1.9
2,615,410	+		AO353_11855	0.23	-0.4
2,615,411	-		AO353_11855	0.23	+0.9
2,615,411	-		AO353_11855	0.23	+1.4
2,615,411	-		AO353_11855	0.23	-0.8
2,615,411	-		AO353_11855	0.23	+0.4
2,615,411	-		AO353_11855	0.23	+0.5
2,615,411	-		AO353_11855	0.23	+0.2
2,615,411	-		AO353_11855	0.23	+1.4
2,615,411	-		AO353_11855	0.23	+1.0
2,615,411	-		AO353_11855	0.23	-2.0
2,615,593	+		AO353_11855	0.63	-0.1
2,615,593	+		AO353_11855	0.63	-1.7
2,615,593	+		AO353_11855	0.63	-1.1
2,615,594	-		AO353_11855	0.64	+0.3
2,615,594	-		AO353_11855	0.64	-0.1
2,615,594	-		AO353_11855	0.64	+0.1
2,615,594	-		AO353_11855	0.64	+0.2
2,615,658	+		AO353_11855	0.78	-0.1
2,615,658	+		AO353_11855	0.78	-1.7
2,615,658	+		AO353_11855	0.78	-0.3
2,615,659	-		AO353_11855	0.78	-1.0
2,615,659	-		AO353_11855	0.78	+1.2
2,615,659	-		AO353_11855	0.78	+1.0
2,615,659	-		AO353_11855	0.78	-0.1
2,615,659	-		AO353_11855	0.78	-0.4
2,615,659	-		AO353_11855	0.78	-0.1
2,615,682	+		AO353_11855	0.83	-1.0
2,615,683	-		AO353_11855	0.83	-1.8
2,615,683	-		AO353_11855	0.83	+0.3
2,615,696	+		AO353_11855	0.86	-0.1
2,616,019	+		AO353_11860	0.15	-1.7
2,616,019	+		AO353_11860	0.15	-1.0
2,616,019	+		AO353_11860	0.15	+0.3
2,616,019	+		AO353_11860	0.15	-1.0
2,616,019	+		AO353_11860	0.15	+0.2
2,616,019	+		AO353_11860	0.15	+1.6
2,616,020	-		AO353_11860	0.15	-0.4
2,616,020	-		AO353_11860	0.15	+1.0
2,616,020	-		AO353_11860	0.15	-0.4
2,616,020	-		AO353_11860	0.15	+0.6
2,616,020	-		AO353_11860	0.15	+0.6
2,616,020	-		AO353_11860	0.15	+0.9
2,616,020	-		AO353_11860	0.15	+1.6