Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10320

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
2,262,710	-		AO353_10315	0.51	-0.0
2,262,735	-		AO353_10315	0.52	-0.0
2,262,830	+		AO353_10315	0.58	-0.9
2,262,831	-		AO353_10315	0.58	-1.5
2,262,831	-		AO353_10315	0.58	-0.8
2,262,947	+		AO353_10315	0.65	+0.5
2,262,947	+		AO353_10315	0.65	-0.1
2,262,947	+		AO353_10315	0.65	-0.1
2,262,948	-		AO353_10315	0.65	-0.5
2,262,948	-		AO353_10315	0.65	-0.0
2,262,948	-		AO353_10315	0.65	+0.1
2,262,948	-		AO353_10315	0.65	-1.0
2,262,948	-		AO353_10315	0.65	+0.7
2,262,948	-		AO353_10315	0.65	-0.1
2,262,948	-		AO353_10315	0.65	-0.8
2,262,948	-		AO353_10315	0.65	+1.7
2,262,956	+		AO353_10315	0.66	+0.3
2,262,956	+		AO353_10315	0.66	+0.3
2,262,956	+		AO353_10315	0.66	-0.0
2,262,956	+		AO353_10315	0.66	+1.0
2,262,957	-		AO353_10315	0.66	+0.3
2,262,957	-		AO353_10315	0.66	+0.7
2,262,957	-		AO353_10315	0.66	-0.1
2,262,957	-		AO353_10315	0.66	-0.9
2,262,957	-		AO353_10315	0.66	-1.0
2,262,957	-		AO353_10315	0.66	+2.5
2,262,998	+		AO353_10315	0.68	-0.9
2,262,998	+		AO353_10315	0.68	-2.1
2,262,999	-		AO353_10315	0.68	+1.4
2,262,999	-		AO353_10315	0.68	+0.1
2,262,999	-		AO353_10315	0.68	+1.3
2,263,009	+		AO353_10315	0.69	+0.1
2,263,009	+		AO353_10315	0.69	+2.1
2,263,009	+		AO353_10315	0.69	-0.3
2,263,009	+		AO353_10315	0.69	+0.7
2,263,009	+		AO353_10315	0.69	+0.7
2,263,009	+		AO353_10315	0.69	-1.2
2,263,009	+		AO353_10315	0.69	+0.3
2,263,009	+		AO353_10315	0.69	+1.5
2,263,010	-		AO353_10315	0.69	-2.5
2,263,010	-		AO353_10315	0.69	-0.5
2,263,010	-		AO353_10315	0.69	+0.9
2,263,010	-		AO353_10315	0.69	-2.1
2,263,010	-		AO353_10315	0.69	-0.1
2,263,013	+		AO353_10315	0.69	+0.4
2,263,013	+		AO353_10315	0.69	-0.9
2,263,013	+		AO353_10315	0.69	-0.3
2,263,013	+		AO353_10315	0.69	-0.1
2,263,013	+		AO353_10315	0.69	+0.7
2,263,013	+		AO353_10315	0.69	-0.0
2,263,013	+		AO353_10315	0.69	+0.3
2,263,013	+		AO353_10315	0.69	-0.3
2,263,014	-		AO353_10315	0.69	+0.7
2,263,014	-		AO353_10315	0.69	+0.7
2,263,014	-		AO353_10315	0.69	-0.7
2,263,014	-		AO353_10315	0.69	+1.0
2,263,014	-		AO353_10315	0.69	-0.3
2,263,014	-		AO353_10315	0.69	+0.7
2,263,014	-		AO353_10315	0.69	-0.0
2,263,014	-		AO353_10315	0.69	+0.6
2,263,014	-		AO353_10315	0.69	-0.4
2,263,014	-		AO353_10315	0.69	-0.0
2,263,014	-		AO353_10315	0.69	+2.1
2,263,014	-		AO353_10315	0.69	-0.0
2,263,014	-		AO353_10315	0.69	+0.5
2,263,014	-		AO353_10315	0.69	+0.0
2,263,198	+		AO353_10315	0.80	+0.1
2,263,199	-		AO353_10315	0.80	-0.5
2,263,208	+		AO353_10315	0.81	+0.3
2,263,208	+		AO353_10315	0.81	-0.8
2,263,208	+		AO353_10315	0.81	+1.3
2,263,209	-		AO353_10315	0.81	-1.0
2,263,209	-		AO353_10315	0.81	+1.9
2,263,209	-		AO353_10315	0.81	-1.4
2,263,260	+		AO353_10315	0.84	-1.0
2,263,260	+		AO353_10315	0.84	-0.3
2,263,260	+		AO353_10315	0.84	+1.3
2,263,261	-		AO353_10315	0.84	-1.1
2,263,261	-		AO353_10315	0.84	-0.2
2,263,261	-		AO353_10315	0.84	-1.1
2,263,261	-		AO353_10315	0.84	+0.9
2,263,371	+				+0.6
2,263,372	-				-0.5
2,263,372	-				+1.4
2,263,372	-				+0.3
2,263,463	-				-0.4
2,263,463	-				+1.7
2,263,515	-				+1.2
2,263,556	+				+0.8
2,263,556	+				-0.0
2,263,557	-				-0.3
2,263,557	-				+1.3
2,263,557	-				-0.6
2,263,557	-				+0.2
2,263,560	+				-0.7
2,263,560	+				+0.9
2,263,560	+				-1.7
2,263,560	+				-0.8
2,263,561	-				-0.0
2,263,561	-				-2.1
2,263,576	-				+2.3
2,263,592	+				+1.2
2,263,592	+				-1.5
2,263,593	-				-1.0
2,263,593	-				+0.3
2,263,593	-				+0.7
2,263,749	+		AO353_10320	0.26	-1.8
2,263,750	-		AO353_10320	0.27	-0.0
2,263,811	+		AO353_10320	0.53	-0.0
2,263,811	+		AO353_10320	0.53	-0.5
2,263,812	-		AO353_10320	0.54	+0.4
2,263,812	-		AO353_10320	0.54	-1.2
2,263,967	+				-0.3
2,263,967	+				-1.2
2,263,967	+				-0.5
2,263,968	-		AO353_10325	0.10	+0.6
2,263,968	-		AO353_10325	0.10	+0.7
2,263,968	-		AO353_10325	0.10	-2.1
2,263,968	-		AO353_10325	0.10	+0.2
2,263,968	-		AO353_10325	0.10	+0.3
2,263,968	-		AO353_10325	0.10	+0.0
2,264,038	+		AO353_10325	0.22	-0.9
2,264,038	+		AO353_10325	0.22	+0.9
2,264,039	-		AO353_10325	0.22	+0.4
2,264,039	-		AO353_10325	0.22	-0.7
2,264,039	-		AO353_10325	0.22	-0.5
2,264,137	+		AO353_10325	0.39	-1.4
2,264,137	+		AO353_10325	0.39	-0.6
2,264,137	+		AO353_10325	0.39	+1.2
2,264,137	+		AO353_10325	0.39	+0.1
2,264,138	-		AO353_10325	0.39	-0.9
2,264,138	-		AO353_10325	0.39	+0.4
2,264,138	-		AO353_10325	0.39	+2.3
2,264,138	-		AO353_10325	0.39	-0.5
2,264,138	-		AO353_10325	0.39	-0.7
2,264,197	+		AO353_10325	0.49	+1.6
2,264,198	-		AO353_10325	0.49	+1.4
2,264,253	+		AO353_10325	0.58	-0.5
2,264,253	+		AO353_10325	0.58	+0.7
2,264,253	+		AO353_10325	0.58	+1.6
2,264,253	+		AO353_10325	0.58	-0.7
2,264,254	-		AO353_10325	0.58	+1.0
2,264,254	-		AO353_10325	0.58	-0.9
2,264,265	+		AO353_10325	0.60	+0.2
2,264,265	+		AO353_10325	0.60	+0.7
2,264,265	+		AO353_10325	0.60	+0.5
2,264,266	-		AO353_10325	0.60	-0.0
2,264,266	-		AO353_10325	0.60	-0.4
2,264,266	-		AO353_10325	0.60	-0.2
2,264,266	-		AO353_10325	0.60	+0.7
2,264,266	-		AO353_10325	0.60	+0.4
2,264,266	-		AO353_10325	0.60	-0.5
2,264,266	-		AO353_10325	0.60	-1.4
2,264,267	+		AO353_10325	0.61	-0.3
2,264,267	+		AO353_10325	0.61	+0.3
2,264,267	+		AO353_10325	0.61	+0.9
2,264,267	+		AO353_10325	0.61	+0.3
2,264,267	+		AO353_10325	0.61	+2.1
2,264,267	+		AO353_10325	0.61	-2.2
2,264,267	+		AO353_10325	0.61	+0.9
2,264,267	+		AO353_10325	0.61	-0.3
2,264,267	+		AO353_10325	0.61	-0.6
2,264,267	+		AO353_10325	0.61	+0.5
2,264,267	+		AO353_10325	0.61	-1.3
2,264,267	+		AO353_10325	0.61	-1.3
2,264,267	+		AO353_10325	0.61	+1.1
2,264,267	+		AO353_10325	0.61	+2.3
2,264,267	+		AO353_10325	0.61	-1.4
2,264,268	-		AO353_10325	0.61	-0.7
2,264,268	-		AO353_10325	0.61	-1.0
2,264,268	-		AO353_10325	0.61	+0.4
2,264,268	-		AO353_10325	0.61	+0.4
2,264,268	-		AO353_10325	0.61	-2.5
2,264,268	-		AO353_10325	0.61	-0.5
2,264,289	+		AO353_10325	0.64	+0.1
2,264,289	+		AO353_10325	0.64	-0.0
2,264,289	+		AO353_10325	0.64	-2.0
2,264,289	+		AO353_10325	0.64	-0.4
2,264,289	+		AO353_10325	0.64	-1.6
2,264,289	+		AO353_10325	0.64	-0.2
2,264,289	+		AO353_10325	0.64	+0.2
2,264,290	-		AO353_10325	0.64	-1.8
2,264,290	-		AO353_10325	0.64	+0.3
2,264,290	-		AO353_10325	0.64	-1.5
2,264,346	+		AO353_10325	0.74	-0.8
2,264,346	+		AO353_10325	0.74	-0.5
2,264,348	+		AO353_10325	0.74	+0.7
2,264,348	+		AO353_10325	0.74	-1.0
2,264,348	+		AO353_10325	0.74	-0.9
2,264,348	+		AO353_10325	0.74	-0.5
2,264,348	+		AO353_10325	0.74	+0.2
2,264,348	+		AO353_10325	0.74	-0.2
2,264,348	+		AO353_10325	0.74	-0.7
2,264,349	-		AO353_10325	0.74	+0.1
2,264,349	-		AO353_10325	0.74	-2.0
2,264,349	-		AO353_10325	0.74	+1.1
2,264,349	-		AO353_10325	0.74	+0.3
2,264,349	-		AO353_10325	0.74	+0.9
2,264,390	-		AO353_10325	0.81	-1.0
2,264,420	-		AO353_10325	0.86	-1.1
2,264,420	-		AO353_10325	0.86	+0.4
2,264,463	+				-0.7
2,264,464	-				-0.1
2,264,487	+				-0.1
2,264,487	+				-1.0
2,264,488	-				-0.8
2,264,493	+				-0.2
2,264,493	+				-1.2
2,264,493	+				-0.3
2,264,493	+				+1.6
2,264,493	+				+1.3
2,264,493	+				-2.1
2,264,494	-				+1.7
2,264,494	-				+1.9
2,264,494	-				-0.2
2,264,494	-				-0.5
2,264,519	+				-1.8
2,264,519	+				-0.6
2,264,522	+				+1.3
2,264,522	+				+0.4
2,264,522	+				+0.3
2,264,523	-				+0.4
2,264,523	-				+0.7
2,264,523	-				-2.4
2,264,523	-				+0.6
2,264,555	+				-2.6
2,264,555	+				+0.5
2,264,639	+				+0.3
2,264,639	+				-0.5
2,264,683	+		AO353_10330	0.12	-0.5
2,264,799	+		AO353_10330	0.23	+1.2
2,264,800	-		AO353_10330	0.23	+0.9
2,264,800	-		AO353_10330	0.23	+1.1
2,264,800	-		AO353_10330	0.23	+0.4
2,264,800	-		AO353_10330	0.23	-1.3
2,264,800	-		AO353_10330	0.23	-1.0
2,264,830	+		AO353_10330	0.25	-1.8
2,264,831	-		AO353_10330	0.26	-2.8
2,264,833	+		AO353_10330	0.26	+0.3
2,264,833	+		AO353_10330	0.26	+1.3
2,264,833	+		AO353_10330	0.26	-2.6
2,264,833	+		AO353_10330	0.26	-0.6
2,264,833	+		AO353_10330	0.26	-1.5
2,264,833	+		AO353_10330	0.26	+0.8
2,264,833	+		AO353_10330	0.26	-0.5
2,264,833	+		AO353_10330	0.26	-0.9
2,264,833	+		AO353_10330	0.26	+0.3
2,264,833	+		AO353_10330	0.26	-1.3
2,264,833	+		AO353_10330	0.26	+1.6
2,264,834	-		AO353_10330	0.26	+0.0
2,264,834	-		AO353_10330	0.26	-0.5
2,264,834	-		AO353_10330	0.26	-0.3
2,264,834	-		AO353_10330	0.26	+0.3
2,264,834	-		AO353_10330	0.26	+0.5
2,264,834	-		AO353_10330	0.26	-0.8
2,264,856	-		AO353_10330	0.28	+0.2