Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09875

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
2,154,945	+		AO353_09870	0.24	-1.6
2,154,945	+		AO353_09870	0.24	+0.1
2,154,945	+		AO353_09870	0.24	-0.4
2,154,945	+		AO353_09870	0.24	-1.4
2,154,945	+		AO353_09870	0.24	-1.9
2,154,945	+		AO353_09870	0.24	-0.9
2,154,945	+		AO353_09870	0.24	-0.1
2,154,946	-		AO353_09870	0.24	-1.7
2,154,946	-		AO353_09870	0.24	-1.1
2,154,946	-		AO353_09870	0.24	+0.1
2,154,946	-		AO353_09870	0.24	-1.1
2,155,123	+		AO353_09870	0.44	+0.2
2,155,123	+		AO353_09870	0.44	+1.5
2,155,123	+		AO353_09870	0.44	-0.9
2,155,124	-		AO353_09870	0.44	+0.6
2,155,124	-		AO353_09870	0.44	+1.0
2,155,124	-		AO353_09870	0.44	+0.1
2,155,124	-		AO353_09870	0.44	-0.9
2,155,124	-		AO353_09870	0.44	+1.2
2,155,124	-		AO353_09870	0.44	-1.4
2,155,124	-		AO353_09870	0.44	+0.4
2,155,125	+		AO353_09870	0.44	-1.7
2,155,201	+		AO353_09870	0.52	+0.8
2,155,201	+		AO353_09870	0.52	+1.4
2,155,201	+		AO353_09870	0.52	+0.7
2,155,202	-		AO353_09870	0.53	-0.3
2,155,202	-		AO353_09870	0.53	+0.2
2,155,224	+		AO353_09870	0.55	+1.1
2,155,225	-		AO353_09870	0.55	+0.4
2,155,225	-		AO353_09870	0.55	-0.8
2,155,225	-		AO353_09870	0.55	+0.5
2,155,225	-		AO353_09870	0.55	-0.4
2,155,225	-		AO353_09870	0.55	+0.7
2,155,225	-		AO353_09870	0.55	+0.4
2,155,240	+		AO353_09870	0.57	-1.4
2,155,241	-		AO353_09870	0.57	+0.7
2,155,242	+		AO353_09870	0.57	-1.0
2,155,242	+		AO353_09870	0.57	-0.1
2,155,242	+		AO353_09870	0.57	+0.4
2,155,243	-		AO353_09870	0.57	-0.3
2,155,243	-		AO353_09870	0.57	+0.4
2,155,243	-		AO353_09870	0.57	-0.1
2,155,265	-		AO353_09870	0.60	-0.1
2,155,265	-		AO353_09870	0.60	+0.3
2,155,389	+		AO353_09870	0.73	-0.7
2,155,389	+		AO353_09870	0.73	-0.7
2,155,390	-		AO353_09870	0.73	-0.8
2,155,390	-		AO353_09870	0.73	+0.7
2,155,390	-		AO353_09870	0.73	-1.5
2,155,448	+		AO353_09870	0.80	+1.3
2,155,448	+		AO353_09870	0.80	-0.3
2,155,448	+		AO353_09870	0.80	-1.7
2,155,448	+		AO353_09870	0.80	-0.5
2,155,449	-		AO353_09870	0.80	-0.3
2,155,449	-		AO353_09870	0.80	-0.2
2,155,449	-		AO353_09870	0.80	-1.5
2,155,449	-		AO353_09870	0.80	-1.2
2,155,524	+		AO353_09870	0.88	+0.7
2,155,524	+		AO353_09870	0.88	+1.0
2,155,524	+		AO353_09870	0.88	+1.6
2,155,525	-		AO353_09870	0.89	+0.9
2,155,525	-		AO353_09870	0.89	-0.1
2,155,525	-		AO353_09870	0.89	+0.6
2,155,525	-		AO353_09870	0.89	+0.3
2,155,525	-		AO353_09870	0.89	+0.8
2,155,555	+				-0.2
2,155,555	+				+0.3
2,155,555	+				-0.9
2,155,555	+				-1.4
2,155,555	+				-0.2
2,155,556	-				+1.3
2,155,556	-				+0.8
2,155,556	-				-0.0
2,155,557	+				-2.4
2,155,557	+				-1.1
2,155,557	+				-0.3
2,155,557	+				-1.2
2,155,557	+				-0.7
2,155,557	+				+0.7
2,155,558	-				+0.9
2,155,558	-				+1.4
2,155,558	-				-1.3
2,155,558	-				-1.2
2,155,558	-				-1.8
2,155,558	-				-0.6
2,155,558	-				-1.7
2,155,561	+				+0.1
2,155,561	+				-0.9
2,155,561	+				-0.3
2,155,561	+				+0.4
2,155,561	+				+0.7
2,155,561	+				-0.3
2,155,561	+				-1.2
2,155,561	+				+1.2
2,155,561	+				-1.3
2,155,561	+				-1.3
2,155,561	+				-0.3
2,155,561	+				-0.0
2,155,561	+				+0.0
2,155,561	+				-0.9
2,155,562	-				+0.0
2,155,562	-				+1.6
2,155,562	-				-0.4
2,155,562	-				+0.1
2,155,562	-				+0.5
2,155,562	-				+0.3
2,155,562	-				+0.1
2,155,562	-				-0.1
2,155,562	-				+1.4
2,155,562	-				+0.0
2,155,562	-				+0.4
2,155,562	-				+1.4
2,155,562	-				+0.7
2,155,627	+				-0.1
2,155,627	+				-0.7
2,155,627	+				-0.4
2,155,627	+				-0.8
2,155,627	+				+0.7
2,155,627	+				+0.0
2,155,627	+				-0.8
2,155,627	+				+0.8
2,155,627	+				+0.2
2,155,628	-				-1.5
2,155,628	-				-1.9
2,155,628	-				-0.9
2,155,628	-				-0.9
2,155,628	-				+0.7
2,155,628	-				+0.0
2,155,628	-				+0.5
2,155,628	-				-0.1
2,155,628	-				-0.9
2,155,628	-				+1.4
2,155,628	-				+0.5
2,155,628	-				-1.1
2,155,628	-				-1.5
2,155,628	-				+0.3
2,155,628	-				-0.9
2,155,628	-				-0.5
2,155,665	-				-1.0
2,155,665	-				-2.0
2,155,665	-				+1.4
2,155,686	+				-0.8
2,155,687	-				-0.9
2,155,843	+				-1.1
2,155,843	+				+1.1
2,155,843	+				-1.6
2,155,843	+				-1.0
2,155,843	+				+0.1
2,155,844	-				+1.6
2,155,844	-				-1.9
2,155,844	-				+0.4
2,155,844	-				+1.8
2,155,844	-				-0.6
2,155,844	-				+2.2
2,155,858	+				-1.1
2,155,859	-				+1.2
2,155,933	+		AO353_09875	0.23	-3.4
2,155,933	+		AO353_09875	0.23	-0.9
2,155,933	+		AO353_09875	0.23	-0.5
2,156,237	+				+0.1
2,156,237	+				-1.3
2,156,237	+				+1.7
2,156,237	+				+0.7
2,156,237	+				-1.2
2,156,237	+				-0.6
2,156,237	+				-0.4
2,156,237	+				-0.3
2,156,237	+				-0.8
2,156,252	+				-0.1
2,156,252	+				-0.6
2,156,252	+				+0.7
2,156,253	-				+0.1
2,156,253	-				+0.5
2,156,253	-				-1.5
2,156,253	-				+0.4
2,156,253	-				+0.1
2,156,253	-				-0.9
2,156,381	+				+0.2
2,156,381	+				+1.5
2,156,400	+				-0.6
2,156,400	+				-0.1
2,156,408	+				+1.4
2,156,408	+				-1.9
2,156,408	+				+0.5
2,156,408	+				-0.4
2,156,408	+				+0.1
2,156,408	+				-0.1
2,156,408	+				-1.2
2,156,408	+				+0.2
2,156,408	+				-1.0
2,156,408	+				+1.0
2,156,408	+				+0.7
2,156,408	+				-0.1
2,156,408	+				-0.9
2,156,408	+				+1.1
2,156,408	+				-1.3
2,156,408	+				-0.8
2,156,409	-				-1.5
2,156,409	-				-0.1
2,156,409	-				-0.1
2,156,409	-				+0.2
2,156,409	-				-1.1
2,156,409	-				+0.3
2,156,409	-				-0.6
2,156,409	-				+0.8
2,156,409	-				-0.2
2,156,409	-				+1.0
2,156,409	-				+0.7
2,156,409	-				-0.4
2,156,409	-				-0.1
2,156,409	-				+1.0
2,156,409	-				+0.1
2,156,409	-				-2.8
2,156,409	-				+0.4
2,156,497	-				-0.1
2,156,497	-				+0.2
2,156,497	-				-0.8
2,156,497	-				-0.6
2,156,497	-				-0.2
2,156,497	-				-0.9
2,156,497	-				-0.2
2,156,497	-				+0.1
2,156,497	-				-0.6
2,156,497	-				+0.1
2,156,513	+				-2.2
2,156,514	-				-0.1
2,156,514	-				+0.1
2,156,571	+				-2.3
2,156,572	-				+0.3
2,156,596	+				-1.1
2,156,596	+				+0.5
2,156,596	+				-0.6
2,156,596	+				-0.3
2,156,596	+				-0.7
2,156,596	+				-1.6
2,156,596	+				-0.4
2,156,596	+				-0.9
2,156,596	+				+0.4
2,156,597	-				-0.1
2,156,597	-				-0.9
2,156,600	+				+0.2
2,156,600	+				+0.7
2,156,600	+				+1.4
2,156,600	+				-1.2
2,156,600	+				+0.6
2,156,600	+				+0.5
2,156,600	+				+0.1
2,156,600	+				+0.6
2,156,601	-				-0.1
2,156,601	-				+0.7
2,156,612	-				-0.1
2,156,657	+				-0.1
2,156,657	+				+0.4
2,156,657	+				-1.3
2,156,657	+				-0.2
2,156,657	+				+0.4
2,156,657	+				-0.3
2,156,657	+				-0.1
2,156,657	+				-0.3
2,156,657	+				+0.3
2,156,657	+				+0.7
2,156,658	-				+0.0
2,156,658	-				-1.3
2,156,658	-				+0.7
2,156,658	-				-0.4
2,156,658	-				-1.6
2,156,658	-				+1.0
2,156,658	-				-0.1
2,156,658	-				-1.1
2,156,658	-				+0.0
2,156,658	-				-1.4
2,156,658	-				-1.2
2,156,658	-				-0.5
2,156,658	-				-1.0
2,156,658	-				-0.2
2,156,658	-				+0.1
2,156,753	+		AO353_09880	0.16	-1.0
2,156,753	+		AO353_09880	0.16	+0.3
2,156,753	+		AO353_09880	0.16	+1.0
2,156,898	+		AO353_09880	0.31	-0.2
2,156,898	+		AO353_09880	0.31	+0.8
2,156,899	-		AO353_09880	0.32	+1.3
2,156,899	-		AO353_09880	0.32	+0.3
2,156,914	+		AO353_09880	0.33	-2.0
2,156,914	+		AO353_09880	0.33	-0.3
2,156,914	+		AO353_09880	0.33	-0.1
2,156,914	+		AO353_09880	0.33	-0.3
2,156,914	+		AO353_09880	0.33	-0.3
2,156,914	+		AO353_09880	0.33	-2.0
2,156,914	+		AO353_09880	0.33	+0.3
2,156,914	+		AO353_09880	0.33	+1.6
2,156,914	+		AO353_09880	0.33	-0.7
2,156,914	+		AO353_09880	0.33	-0.1
2,156,914	+		AO353_09880	0.33	+0.9
2,156,915	-		AO353_09880	0.33	-0.4
2,156,915	-		AO353_09880	0.33	-1.7
2,156,915	-		AO353_09880	0.33	-1.1
2,156,915	-		AO353_09880	0.33	+0.5
2,156,915	-		AO353_09880	0.33	-2.1