Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09395

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
2,063,046	+		AO353_09390	0.27	+1.6
2,063,238	+		AO353_09390	0.41	-2.2
2,063,239	-		AO353_09390	0.41	-0.8
2,063,239	-		AO353_09390	0.41	-0.5
2,063,239	-		AO353_09390	0.41	-1.8
2,063,274	+		AO353_09390	0.44	+0.5
2,063,274	+		AO353_09390	0.44	-0.4
2,063,274	+		AO353_09390	0.44	-0.1
2,063,274	+		AO353_09390	0.44	-0.4
2,063,275	-		AO353_09390	0.44	-0.1
2,063,275	-		AO353_09390	0.44	+0.9
2,063,275	-		AO353_09390	0.44	+0.9
2,063,380	+		AO353_09390	0.52	+1.6
2,063,434	-		AO353_09390	0.56	+0.9
2,063,538	+		AO353_09390	0.64	-0.4
2,063,538	+		AO353_09390	0.64	-1.0
2,063,538	+		AO353_09390	0.64	-0.3
2,063,538	+		AO353_09390	0.64	-1.7
2,063,538	+		AO353_09390	0.64	-0.4
2,063,538	+		AO353_09390	0.64	+0.8
2,063,538	+		AO353_09390	0.64	+2.0
2,063,539	-		AO353_09390	0.64	+0.2
2,063,539	-		AO353_09390	0.64	+3.2
2,063,539	-		AO353_09390	0.64	-1.4
2,063,539	-		AO353_09390	0.64	+0.7
2,063,539	-		AO353_09390	0.64	-1.2
2,063,539	-		AO353_09390	0.64	+0.6
2,063,658	+		AO353_09390	0.73	+1.2
2,063,733	+		AO353_09390	0.78	-1.3
2,063,733	+		AO353_09390	0.78	+1.0
2,063,734	-		AO353_09390	0.78	+1.5
2,063,904	+				-0.1
2,063,904	+				+0.3
2,063,904	+				-0.5
2,063,905	-				-0.4
2,063,905	-				+1.2
2,063,905	-				-0.6
2,063,905	-				-0.2
2,063,946	+				-0.2
2,063,946	+				-1.5
2,063,947	-				+0.5
2,063,947	-				-0.1
2,063,947	-				+0.4
2,063,947	-				+0.6
2,063,947	-				+1.0
2,063,949	+				+1.3
2,063,950	-				-0.8
2,063,950	-				+1.0
2,063,950	-				+1.6
2,064,010	+				+0.0
2,064,010	+				+0.9
2,064,010	+				+0.3
2,064,010	+				-0.8
2,064,011	-				+0.0
2,064,011	-				+0.5
2,064,057	+				-0.2
2,064,057	+				+1.0
2,064,057	+				+0.2
2,064,058	-				-0.6
2,064,058	-				+0.1
2,064,058	-				+1.2
2,064,060	+				-0.0
2,064,060	+				-2.7
2,064,061	-				+1.6
2,064,061	-				-0.1
2,064,061	-				-0.6
2,064,061	-				+3.0
2,064,128	+		AO353_09395	0.21	+0.3
2,064,129	-		AO353_09395	0.21	+0.8
2,064,129	-		AO353_09395	0.21	+0.5
2,064,290	+		AO353_09395	0.53	-0.6
2,064,290	+		AO353_09395	0.53	+0.3
2,064,290	+		AO353_09395	0.53	+0.2
2,064,290	+		AO353_09395	0.53	+1.2
2,064,290	+		AO353_09395	0.53	+1.6
2,064,340	+		AO353_09395	0.63	-0.6
2,064,341	-		AO353_09395	0.63	+1.5
2,064,502	+				-0.1
2,064,502	+				-0.5
2,064,502	+				-0.5
2,064,502	+				-1.6
2,064,502	+				-0.2
2,064,502	+				-1.2
2,064,502	+				-1.0
2,064,503	-				-1.1
2,064,503	-				+0.7
2,064,503	-				-0.6
2,064,503	-				+0.9
2,064,503	-				-1.2
2,064,505	+				-0.4
2,064,552	+				+0.5
2,064,552	+				-0.1
2,064,552	+				+0.0
2,064,552	+				-1.2
2,064,552	+				+1.4
2,064,553	-				+1.4
2,064,553	-				+1.3
2,064,553	-				-1.1
2,064,553	-				+0.2
2,064,583	+				+0.2
2,064,583	+				+0.1
2,065,226	-		AO353_09400	0.58	-0.6
2,065,226	-		AO353_09400	0.58	+0.2
2,065,450	+		AO353_09400	0.77	+1.5
2,065,450	+		AO353_09400	0.77	+1.6
2,065,451	-		AO353_09400	0.77	+1.2
2,065,451	-		AO353_09400	0.77	-0.3
2,065,451	-		AO353_09400	0.77	+0.2
2,065,451	-		AO353_09400	0.77	-0.2
2,065,520	+		AO353_09400	0.82	-0.8