Experiment: Spectinomycin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09265 and AO353_09270 are separated by 12 nucleotides AO353_09270 and AO353_09275 are separated by 168 nucleotides AO353_09275 and AO353_09280 are separated by 57 nucleotides
AO353_09265: AO353_09265 - hypothetical protein, at 2,032,435 to 2,033,298
_09265
AO353_09270: AO353_09270 - guanylate kinase, at 2,033,311 to 2,033,931
_09270
AO353_09275: AO353_09275 - DNA-directed RNA polymerase subunit omega, at 2,034,100 to 2,034,363
_09275
AO353_09280: AO353_09280 - (p)ppGpp synthetase, at 2,034,421 to 2,036,526
_09280
Position (kb)
2034
2035 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2033.196 kb on + strand, within AO353_09265 at 2033.196 kb on + strand, within AO353_09265 at 2033.196 kb on + strand, within AO353_09265 at 2033.196 kb on + strand, within AO353_09265 at 2033.196 kb on + strand, within AO353_09265 at 2033.196 kb on + strand, within AO353_09265 at 2033.296 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.965 kb on - strand at 2033.965 kb on - strand at 2033.965 kb on - strand at 2033.965 kb on - strand at 2033.972 kb on + strand at 2034.075 kb on + strand at 2034.075 kb on + strand at 2034.075 kb on + strand at 2034.096 kb on + strand at 2034.096 kb on + strand at 2034.096 kb on + strand at 2034.096 kb on + strand at 2034.096 kb on + strand at 2034.096 kb on + strand at 2034.128 kb on + strand, within AO353_09275 at 2034.128 kb on + strand, within AO353_09275 at 2034.128 kb on + strand, within AO353_09275 at 2034.168 kb on + strand, within AO353_09275 at 2034.280 kb on + strand, within AO353_09275 at 2034.280 kb on + strand, within AO353_09275 at 2034.280 kb on + strand, within AO353_09275 at 2034.280 kb on + strand, within AO353_09275 at 2034.280 kb on + strand, within AO353_09275 at 2034.280 kb on + strand, within AO353_09275 at 2034.361 kb on + strand at 2034.382 kb on + strand at 2034.382 kb on + strand at 2034.385 kb on + strand at 2034.385 kb on + strand at 2034.385 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Spectinomycin 0.2 mg/ml remove 2,033,196 + AO353_09265 0.88 -0.6 2,033,196 + AO353_09265 0.88 -0.5 2,033,196 + AO353_09265 0.88 +1.9 2,033,196 + AO353_09265 0.88 +0.2 2,033,196 + AO353_09265 0.88 +2.2 2,033,196 + AO353_09265 0.88 +0.8 2,033,296 + -0.8 2,033,964 + -1.5 2,033,964 + -0.8 2,033,964 + -0.6 2,033,964 + +1.0 2,033,964 + -0.7 2,033,964 + -1.9 2,033,964 + -2.0 2,033,964 + -1.6 2,033,964 + +0.9 2,033,965 - -3.0 2,033,965 - -1.3 2,033,965 - -1.9 2,033,965 - -2.1 2,033,972 + -1.8 2,034,075 + -2.2 2,034,075 + -2.6 2,034,075 + -1.6 2,034,096 + -1.6 2,034,096 + +0.2 2,034,096 + -0.8 2,034,096 + -0.6 2,034,096 + -1.0 2,034,096 + -1.6 2,034,128 + AO353_09275 0.11 +0.2 2,034,128 + AO353_09275 0.11 -0.4 2,034,128 + AO353_09275 0.11 -1.8 2,034,168 + AO353_09275 0.26 -2.2 2,034,280 + AO353_09275 0.68 -0.6 2,034,280 + AO353_09275 0.68 -1.4 2,034,280 + AO353_09275 0.68 +0.3 2,034,280 + AO353_09275 0.68 +1.6 2,034,280 + AO353_09275 0.68 -2.0 2,034,280 + AO353_09275 0.68 -0.8 2,034,361 + -0.6 2,034,382 + +1.2 2,034,382 + +0.6 2,034,385 + -0.8 2,034,385 + -0.5 2,034,385 + -0.7
Or see this region's nucleotide sequence