Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08580

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
1,883,910	+		AO353_08575	0.34	+0.4
1,883,966	+		AO353_08575	0.39	+0.1
1,883,966	+		AO353_08575	0.39	+0.3
1,883,966	+		AO353_08575	0.39	+0.4
1,883,966	+		AO353_08575	0.39	-0.3
1,883,966	+		AO353_08575	0.39	-0.0
1,883,966	+		AO353_08575	0.39	+0.3
1,883,966	+		AO353_08575	0.39	-0.9
1,883,966	+		AO353_08575	0.39	-0.7
1,883,966	+		AO353_08575	0.39	-0.4
1,883,966	+		AO353_08575	0.39	-1.4
1,883,967	-		AO353_08575	0.39	-0.8
1,883,967	-		AO353_08575	0.39	-0.9
1,883,967	-		AO353_08575	0.39	+0.2
1,883,967	-		AO353_08575	0.39	+1.1
1,883,967	-		AO353_08575	0.39	+0.6
1,883,984	+		AO353_08575	0.41	+0.5
1,883,984	+		AO353_08575	0.41	-1.6
1,883,984	+		AO353_08575	0.41	+0.8
1,883,984	+		AO353_08575	0.41	-0.5
1,883,984	+		AO353_08575	0.41	-0.5
1,883,984	+		AO353_08575	0.41	+0.6
1,883,985	-		AO353_08575	0.41	-1.8
1,883,985	-		AO353_08575	0.41	+1.5
1,883,985	-		AO353_08575	0.41	+0.7
1,883,993	+		AO353_08575	0.41	-1.7
1,883,993	+		AO353_08575	0.41	-1.9
1,883,993	+		AO353_08575	0.41	+1.6
1,883,993	+		AO353_08575	0.41	-0.0
1,883,993	+		AO353_08575	0.41	-0.6
1,883,993	+		AO353_08575	0.41	-1.0
1,883,993	+		AO353_08575	0.41	+0.7
1,883,993	+		AO353_08575	0.41	-1.6
1,883,994	-		AO353_08575	0.42	+0.5
1,883,994	-		AO353_08575	0.42	-1.4
1,883,994	-		AO353_08575	0.42	+0.2
1,883,994	-		AO353_08575	0.42	-1.2
1,883,994	-		AO353_08575	0.42	+0.7
1,883,994	-		AO353_08575	0.42	-1.6
1,883,994	-		AO353_08575	0.42	-0.7
1,883,994	-		AO353_08575	0.42	-0.1
1,883,994	-		AO353_08575	0.42	+0.7
1,884,010	+		AO353_08575	0.43	+0.1
1,884,011	-		AO353_08575	0.43	-1.2
1,884,071	+		AO353_08575	0.49	-1.7
1,884,071	+		AO353_08575	0.49	-0.7
1,884,071	+		AO353_08575	0.49	-0.1
1,884,071	+		AO353_08575	0.49	+1.7
1,884,071	+		AO353_08575	0.49	-0.7
1,884,071	+		AO353_08575	0.49	-0.4
1,884,071	+		AO353_08575	0.49	-0.6
1,884,071	+		AO353_08575	0.49	+0.6
1,884,071	+		AO353_08575	0.49	-2.3
1,884,071	+		AO353_08575	0.49	-0.7
1,884,071	+		AO353_08575	0.49	-0.5
1,884,071	+		AO353_08575	0.49	-1.9
1,884,071	+		AO353_08575	0.49	-0.9
1,884,071	+		AO353_08575	0.49	-1.5
1,884,071	+		AO353_08575	0.49	-0.2
1,884,072	-		AO353_08575	0.49	+0.1
1,884,072	-		AO353_08575	0.49	+0.1
1,884,072	-		AO353_08575	0.49	-0.6
1,884,072	-		AO353_08575	0.49	-2.1
1,884,072	-		AO353_08575	0.49	+2.4
1,884,072	-		AO353_08575	0.49	-0.5
1,884,072	-		AO353_08575	0.49	+0.9
1,884,072	-		AO353_08575	0.49	-1.0
1,884,072	-		AO353_08575	0.49	-2.7
1,884,221	+		AO353_08575	0.62	+1.3
1,884,221	+		AO353_08575	0.62	+0.9
1,884,221	+		AO353_08575	0.62	-0.0
1,884,248	+		AO353_08575	0.65	-0.6
1,884,321	-		AO353_08575	0.71	-0.0
1,884,411	-		AO353_08575	0.80	-0.9
1,884,527	+				+0.6
1,884,527	+				+0.7
1,884,527	+				+1.5
1,884,527	+				-1.2
1,884,540	+				+0.8
1,884,540	+				-0.2
1,884,540	+				-1.4
1,884,541	-				-0.6
1,884,541	-				+0.0
1,884,541	-				+1.6
1,884,541	-				-1.4
1,884,542	+				-1.4
1,884,542	+				-0.2
1,884,542	+				+0.6
1,884,542	+				-0.6
1,884,542	+				+0.1
1,884,542	+				-1.0
1,884,542	+				+0.6
1,884,542	+				-1.3
1,884,542	+				-1.0
1,884,542	+				-0.4
1,884,542	+				+0.6
1,884,543	-				+1.5
1,884,543	-				+0.6
1,884,543	-				+0.3
1,884,543	-				-0.3
1,884,543	-				+0.6
1,884,543	-				-0.1
1,884,543	-				+0.1
1,884,543	-				+0.0
1,884,543	-				-0.3
1,884,543	-				+0.0
1,884,543	-				+0.6
1,884,543	-				+1.7
1,884,543	-				+0.3
1,884,543	-				+0.1
1,884,543	-				-1.8
1,884,543	-				-1.9
1,884,543	-				-0.9
1,884,543	-				-1.9
1,884,543	-				-0.8
1,884,546	+				+1.8
1,884,546	+				-1.7
1,884,546	+				-0.9
1,884,546	+				-0.0
1,884,546	+				+0.2
1,884,546	+				-1.2
1,884,546	+				-0.9
1,884,546	+				+0.1
1,884,546	+				+0.7
1,884,546	+				-1.6
1,884,546	+				-1.2
1,884,546	+				+1.4
1,884,546	+				+0.1
1,884,546	+				-1.6
1,884,546	+				-0.3
1,884,546	+				+0.4
1,884,546	+				-0.1
1,884,546	+				+0.4
1,884,546	+				+0.6
1,884,546	+				-0.1
1,884,546	+				+0.4
1,884,546	+				-0.2
1,884,546	+				-0.4
1,884,547	-				-0.6
1,884,547	-				+0.8
1,884,547	-				-1.0
1,884,547	-				+1.2
1,884,547	-				+0.8
1,884,547	-				+0.7
1,884,547	-				+0.6
1,884,547	-				+0.9
1,884,547	-				-1.7
1,884,646	+				-0.9
1,884,646	+				-0.5
1,884,646	+				+0.2
1,884,647	-				+0.9
1,884,651	+				-0.9
1,884,651	+				+0.3
1,884,651	+				-0.2
1,884,651	+				-0.4
1,884,651	+				+0.1
1,884,651	+				+0.4
1,884,652	-				+0.1
1,884,652	-				-0.4
1,884,652	-				+0.1
1,884,721	+				-1.3
1,884,721	+				-0.2
1,884,721	+				-2.1
1,884,721	+				-1.3
1,884,721	+				-0.4
1,884,722	-				-0.5
1,884,722	-				-0.2
1,884,722	-				+1.1
1,884,760	+				-0.1
1,884,760	+				+1.9
1,884,761	-				+2.3
1,884,761	-				-1.1
1,884,761	-				-0.4
1,884,764	+				-1.9
1,884,764	+				-0.7
1,884,764	+				-2.0
1,884,765	-				+0.7
1,884,822	+				-0.6
1,884,823	-				+0.3
1,884,823	-				-1.0
1,884,897	+				+2.1
1,884,897	+				-0.9
1,884,898	-				+1.1
1,884,927	+				+1.1
1,884,927	+				-1.2
1,884,928	-				+0.1
1,884,963	+		AO353_08580	0.13	-1.2
1,884,964	-		AO353_08580	0.13	+0.2
1,884,964	-		AO353_08580	0.13	+1.4
1,884,964	-		AO353_08580	0.13	+0.0
1,884,964	-		AO353_08580	0.13	-1.0
1,884,964	-		AO353_08580	0.13	+0.6
1,885,041	+		AO353_08580	0.20	-0.9
1,885,041	+		AO353_08580	0.20	-1.0
1,885,041	+		AO353_08580	0.20	+0.7
1,885,041	+		AO353_08580	0.20	-0.1
1,885,041	+		AO353_08580	0.20	-1.9
1,885,041	+		AO353_08580	0.20	-0.4
1,885,042	-		AO353_08580	0.20	+1.1
1,885,042	-		AO353_08580	0.20	+0.6
1,885,056	+		AO353_08580	0.21	-0.7
1,885,056	+		AO353_08580	0.21	-1.7
1,885,056	+		AO353_08580	0.21	-0.1
1,885,056	+		AO353_08580	0.21	+0.0
1,885,056	+		AO353_08580	0.21	-0.5
1,885,057	-		AO353_08580	0.22	+1.2
1,885,084	+		AO353_08580	0.24	+1.8
1,885,090	+		AO353_08580	0.25	+0.1
1,885,104	+		AO353_08580	0.26	+0.4
1,885,104	+		AO353_08580	0.26	-1.4
1,885,104	+		AO353_08580	0.26	-1.3
1,885,104	+		AO353_08580	0.26	-2.1
1,885,104	+		AO353_08580	0.26	+0.5
1,885,104	+		AO353_08580	0.26	+0.3
1,885,105	-		AO353_08580	0.26	-1.0
1,885,105	-		AO353_08580	0.26	+1.8
1,885,105	-		AO353_08580	0.26	+0.7
1,885,105	-		AO353_08580	0.26	+0.7
1,885,137	+		AO353_08580	0.29	-2.1
1,885,137	+		AO353_08580	0.29	+0.3
1,885,137	+		AO353_08580	0.29	+0.1
1,885,137	+		AO353_08580	0.29	-0.7
1,885,138	-		AO353_08580	0.29	-0.9
1,885,248	+		AO353_08580	0.39	-0.3
1,885,248	+		AO353_08580	0.39	-1.7
1,885,248	+		AO353_08580	0.39	-1.4
1,885,248	+		AO353_08580	0.39	+1.4
1,885,248	+		AO353_08580	0.39	-1.0
1,885,248	+		AO353_08580	0.39	-0.9
1,885,248	+		AO353_08580	0.39	-0.2
1,885,248	+		AO353_08580	0.39	-0.7
1,885,248	+		AO353_08580	0.39	-2.4
1,885,249	-		AO353_08580	0.39	+0.5
1,885,249	-		AO353_08580	0.39	-2.4
1,885,249	-		AO353_08580	0.39	+1.4
1,885,249	-		AO353_08580	0.39	-0.7
1,885,249	-		AO353_08580	0.39	-0.3
1,885,266	+		AO353_08580	0.41	-0.1
1,885,266	+		AO353_08580	0.41	-0.1
1,885,266	+		AO353_08580	0.41	-0.3
1,885,266	+		AO353_08580	0.41	-0.4
1,885,266	+		AO353_08580	0.41	-1.9
1,885,266	+		AO353_08580	0.41	-1.1
1,885,266	+		AO353_08580	0.41	-1.6
1,885,353	+		AO353_08580	0.49	-1.7
1,885,353	+		AO353_08580	0.49	-1.3
1,885,354	-		AO353_08580	0.49	-2.0
1,885,354	-		AO353_08580	0.49	-0.4
1,885,354	-		AO353_08580	0.49	+1.8
1,885,354	-		AO353_08580	0.49	-1.1
1,885,354	-		AO353_08580	0.49	-1.7
1,885,354	-		AO353_08580	0.49	-1.4
1,885,503	+		AO353_08580	0.62	+0.1
1,885,504	-		AO353_08580	0.62	+0.4
1,885,530	+		AO353_08580	0.65	-1.4
1,885,530	+		AO353_08580	0.65	+0.7
1,885,530	+		AO353_08580	0.65	-1.7
1,885,530	+		AO353_08580	0.65	-1.3
1,885,530	+		AO353_08580	0.65	+0.3
1,885,530	+		AO353_08580	0.65	-1.5
1,885,530	+		AO353_08580	0.65	+0.3
1,885,530	+		AO353_08580	0.65	+0.5
1,885,530	+		AO353_08580	0.65	-0.4
1,885,530	+		AO353_08580	0.65	+2.7
1,885,531	-		AO353_08580	0.65	-1.0
1,885,531	-		AO353_08580	0.65	-0.7
1,885,531	-		AO353_08580	0.65	-0.5
1,885,531	-		AO353_08580	0.65	-1.1
1,885,531	-		AO353_08580	0.65	+0.6
1,885,531	-		AO353_08580	0.65	-1.7
1,885,531	-		AO353_08580	0.65	+0.6
1,885,531	-		AO353_08580	0.65	+1.3
1,885,531	-		AO353_08580	0.65	+0.2
1,885,531	-		AO353_08580	0.65	+0.9
1,885,531	-		AO353_08580	0.65	-0.2
1,885,602	+		AO353_08580	0.71	+0.3
1,885,602	+		AO353_08580	0.71	+0.1
1,885,602	+		AO353_08580	0.71	-1.4
1,885,603	-		AO353_08580	0.71	+0.1
1,885,603	-		AO353_08580	0.71	+0.3
1,885,635	+		AO353_08580	0.74	+1.1
1,885,679	+		AO353_08580	0.78	-1.0
1,885,679	+		AO353_08580	0.78	+0.6
1,885,679	+		AO353_08580	0.78	+0.9
1,885,680	-		AO353_08580	0.78	+0.1
1,885,752	+		AO353_08580	0.85	-0.2
1,885,752	+		AO353_08580	0.85	-0.6
1,885,752	+		AO353_08580	0.85	+0.6
1,885,752	+		AO353_08580	0.85	-1.0
1,885,752	+		AO353_08580	0.85	-0.3
1,885,752	+		AO353_08580	0.85	-0.1
1,885,752	+		AO353_08580	0.85	-1.2
1,885,753	-		AO353_08580	0.85	-1.2
1,885,753	-		AO353_08580	0.85	+0.7
1,885,809	+				-0.9
1,885,809	+				+1.6
1,885,809	+				+1.4
1,885,809	+				-2.3
1,885,809	+				-1.9
1,885,809	+				+0.4
1,885,810	-				+0.7
1,885,810	-				+0.6
1,885,810	-				+0.6
1,885,810	-				-0.7
1,885,810	-				+0.1
1,885,824	+				-0.5
1,885,824	+				-1.2
1,885,824	+				+0.7
1,885,825	-				-0.0
1,885,825	-				+0.1
1,885,825	-				-0.6
1,885,840	+				-1.3
1,885,919	+				-0.7
1,885,919	+				-0.4
1,885,919	+				-1.4
1,885,919	+				-1.2
1,885,919	+				+1.0
1,885,920	-				+1.3
1,885,920	-				-1.1
1,885,920	-				-0.4
1,885,934	+				-0.2
1,885,934	+				+1.1
1,885,935	-				-0.3
1,885,935	-				+2.6
1,885,935	-				-0.4
1,885,946	+				+0.3
1,885,946	+				+0.7
1,885,946	+				+1.1
1,885,946	+				+1.1
1,885,946	+				+0.6
1,885,946	+				-1.5
1,885,947	-				-0.9
1,885,955	+				-0.7
1,886,030	+				-0.9
1,886,030	+				+0.6
1,886,030	+				-0.1
1,886,030	+				-1.7
1,886,030	+				+0.6
1,886,030	+				+1.0
1,886,030	+				-1.3
1,886,031	-				+1.8
1,886,031	-				+1.5
1,886,031	-				+0.2
1,886,031	-				-1.9
1,886,031	-				-0.4
1,886,109	+				-1.7
1,886,109	+				-0.0
1,886,109	+				+1.8
1,886,110	-				+1.5
1,886,110	-				-0.7
1,886,110	-				-0.6
1,886,110	-				-0.4
1,886,116	+				-1.2
1,886,116	+				-0.3
1,886,116	+				+0.5
1,886,116	+				+0.9
1,886,117	-				+0.6
1,886,117	-				-0.1
1,886,117	-				-0.9
1,886,117	-				-1.0
1,886,299	+		AO353_08585	0.13	-1.0
1,886,299	+		AO353_08585	0.13	-1.3
1,886,299	+		AO353_08585	0.13	+0.0
1,886,352	+		AO353_08585	0.17	+0.0
1,886,352	+		AO353_08585	0.17	-1.0
1,886,352	+		AO353_08585	0.17	+0.3
1,886,353	-		AO353_08585	0.17	+1.1
1,886,353	-		AO353_08585	0.17	+3.7
1,886,353	-		AO353_08585	0.17	+1.9
1,886,353	-		AO353_08585	0.17	+1.1
1,886,413	+		AO353_08585	0.22	-0.1
1,886,413	+		AO353_08585	0.22	+0.9
1,886,414	-		AO353_08585	0.22	-0.7
1,886,414	-		AO353_08585	0.22	-0.4
1,886,444	+		AO353_08585	0.24	+1.8
1,886,465	+		AO353_08585	0.26	-0.2
1,886,465	+		AO353_08585	0.26	+0.8
1,886,465	+		AO353_08585	0.26	+1.4
1,886,465	+		AO353_08585	0.26	+1.8
1,886,466	-		AO353_08585	0.26	+1.1
1,886,466	-		AO353_08585	0.26	+0.7
1,886,512	+		AO353_08585	0.29	-0.5
1,886,512	+		AO353_08585	0.29	-1.3
1,886,513	-		AO353_08585	0.29	+2.0
1,886,596	+		AO353_08585	0.35	+0.9
1,886,596	+		AO353_08585	0.35	-0.1
1,886,596	+		AO353_08585	0.35	-1.0
1,886,597	-		AO353_08585	0.35	+0.6
1,886,597	-		AO353_08585	0.35	+1.4
1,886,597	-		AO353_08585	0.35	-1.2
1,886,647	+		AO353_08585	0.39	-1.1
1,886,647	+		AO353_08585	0.39	+1.6
1,886,647	+		AO353_08585	0.39	-1.9
1,886,722	+		AO353_08585	0.44	-0.7
1,886,722	+		AO353_08585	0.44	+0.8
1,886,722	+		AO353_08585	0.44	-0.9
1,886,722	+		AO353_08585	0.44	+1.1
1,886,723	-		AO353_08585	0.45	+1.0
1,886,723	-		AO353_08585	0.45	+0.4
1,886,723	-		AO353_08585	0.45	+2.1
1,886,723	-		AO353_08585	0.45	+0.9
1,886,723	-		AO353_08585	0.45	+0.3
1,886,755	+		AO353_08585	0.47	+0.3
1,886,755	+		AO353_08585	0.47	+0.1
1,886,755	+		AO353_08585	0.47	-0.4
1,886,756	-		AO353_08585	0.47	-1.4
1,886,756	-		AO353_08585	0.47	-0.9
1,886,756	-		AO353_08585	0.47	+0.7
1,886,806	-		AO353_08585	0.51	+1.6
1,886,873	+		AO353_08585	0.56	+0.4