Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07205

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
1,579,701	+				+0.2
1,579,702	-				+0.2
1,579,720	+				+0.9
1,579,721	-				-0.3
1,579,721	-				-1.0
1,579,721	-				+0.3
1,579,772	+				-0.5
1,579,772	+				+0.6
1,579,772	+				-0.3
1,579,773	-				+0.8
1,579,773	-				-0.5
1,579,773	-				-2.3
1,579,773	-				+0.4
1,579,773	-				-1.8
1,579,773	-				-1.4
1,579,773	-				+0.7
1,579,773	-				-1.0
1,579,773	-				+0.6
1,579,777	+				-0.4
1,579,778	-				-0.8
1,579,778	-				+0.5
1,579,778	-				-1.0
1,579,778	-				+0.6
1,579,778	-				+2.6
1,579,783	+				-0.6
1,579,784	-				+0.9
1,579,784	-				-0.5
1,579,784	-				+0.7
1,579,795	+				+1.2
1,579,815	+				+0.2
1,579,815	+				+0.7
1,579,816	-				+0.7
1,579,841	+				-0.4
1,579,841	+				-0.5
1,579,841	+				-1.9
1,579,842	-				+1.0
1,579,842	-				-1.6
1,579,842	-				-1.6
1,579,842	-				+0.4
1,579,877	-				+0.3
1,579,912	+				+1.0
1,579,912	+				-0.0
1,579,913	-				-1.3
1,579,927	+				+1.0
1,579,927	+				-0.5
1,579,927	+				+0.2
1,579,927	+				-1.1
1,579,927	+				+0.4
1,579,927	+				-0.2
1,579,927	+				-0.8
1,579,927	+				+0.7
1,579,927	+				+0.0
1,579,927	+				+1.5
1,579,928	-				+0.1
1,579,928	-				+1.0
1,579,928	-				+1.1
1,579,928	-				-1.2
1,579,928	-				+0.8
1,579,930	+				-0.0
1,579,965	+				-1.8
1,579,965	+				+0.5
1,579,966	-				+1.6
1,579,966	-				+0.3
1,579,966	-				-0.0
1,579,966	-				-1.2
1,579,966	-				+0.5
1,580,008	+		AO353_07200	0.14	-0.6
1,580,008	+		AO353_07200	0.14	-1.5
1,580,008	+		AO353_07200	0.14	+0.5
1,580,009	-		AO353_07200	0.14	-0.5
1,580,009	-		AO353_07200	0.14	-2.1
1,580,009	-		AO353_07200	0.14	+0.4
1,580,228	+		AO353_07200	0.48	-0.8
1,580,228	+		AO353_07200	0.48	+0.3
1,580,228	+		AO353_07200	0.48	-0.7
1,580,228	+		AO353_07200	0.48	+0.7
1,580,228	+		AO353_07200	0.48	-0.8
1,580,228	+		AO353_07200	0.48	-1.0
1,580,229	-		AO353_07200	0.48	+0.2
1,580,229	-		AO353_07200	0.48	-1.0
1,580,273	+		AO353_07200	0.55	+0.4
1,580,273	+		AO353_07200	0.55	+0.9
1,580,273	+		AO353_07200	0.55	-0.6
1,580,273	+		AO353_07200	0.55	+1.3
1,580,273	+		AO353_07200	0.55	+1.0
1,580,273	+		AO353_07200	0.55	+0.9
1,580,273	+		AO353_07200	0.55	+0.5
1,580,273	+		AO353_07200	0.55	+1.3
1,580,273	+		AO353_07200	0.55	-0.6
1,580,273	+		AO353_07200	0.55	+0.7
1,580,273	+		AO353_07200	0.55	-1.0
1,580,274	-		AO353_07200	0.55	-2.4
1,580,274	-		AO353_07200	0.55	-1.1
1,580,274	-		AO353_07200	0.55	+1.8
1,580,274	-		AO353_07200	0.55	+1.5
1,580,274	-		AO353_07200	0.55	+1.5
1,580,274	-		AO353_07200	0.55	+1.0
1,580,274	-		AO353_07200	0.55	+0.2
1,580,274	-		AO353_07200	0.55	+1.0
1,580,311	+		AO353_07200	0.61	+0.2
1,580,312	-		AO353_07200	0.61	+0.8
1,580,312	-		AO353_07200	0.61	+0.5
1,580,312	-		AO353_07200	0.61	-1.0
1,580,594	+				+0.2
1,580,594	+				-0.6
1,580,595	-				+2.0
1,580,595	-				+1.0
1,580,990	+		AO353_07205	0.61	-1.5
1,580,990	+		AO353_07205	0.61	+0.2
1,580,990	+		AO353_07205	0.61	-1.2
1,580,990	+		AO353_07205	0.61	-1.8
1,580,990	+		AO353_07205	0.61	-2.7
1,580,990	+		AO353_07205	0.61	-1.5
1,580,990	+		AO353_07205	0.61	-1.6
1,580,990	+		AO353_07205	0.61	+0.6
1,580,990	+		AO353_07205	0.61	+0.4
1,580,990	+		AO353_07205	0.61	-0.8
1,580,991	-		AO353_07205	0.61	-1.0
1,580,991	-		AO353_07205	0.61	-0.2
1,580,991	-		AO353_07205	0.61	-0.6
1,580,991	-		AO353_07205	0.61	-1.4
1,580,991	-		AO353_07205	0.61	-0.3
1,580,991	-		AO353_07205	0.61	-0.8
1,580,991	-		AO353_07205	0.61	-1.3
1,580,991	-		AO353_07205	0.61	-1.4
1,580,991	-		AO353_07205	0.61	-1.1
1,580,991	-		AO353_07205	0.61	-1.4
1,580,991	-		AO353_07205	0.61	-0.2
1,580,991	-		AO353_07205	0.61	-0.9
1,580,991	-		AO353_07205	0.61	-2.4
1,581,004	-		AO353_07205	0.63	+1.0
1,581,249	+				+1.2
1,581,249	+				-1.8
1,581,249	+				+0.0
1,581,249	+				-0.6
1,581,250	-				-1.0
1,581,250	-				-1.5
1,581,250	-				+0.1
1,581,250	-				+0.5
1,581,288	-				-0.6
1,581,340	+				+0.0
1,581,340	+				+0.3
1,581,340	+				+0.1
1,581,340	+				+1.0
1,581,341	-				-0.4
1,581,341	-				+1.4
1,581,341	-				+0.6
1,581,341	-				+0.3
1,581,441	+		AO353_07210	0.13	+0.3
1,581,441	+		AO353_07210	0.13	+0.4
1,581,441	+		AO353_07210	0.13	-0.4
1,581,441	+		AO353_07210	0.13	-0.2
1,581,441	+		AO353_07210	0.13	+0.6
1,581,442	-		AO353_07210	0.14	+0.6
1,581,442	-		AO353_07210	0.14	+1.0
1,581,500	-		AO353_07210	0.20	+1.0
1,581,604	+		AO353_07210	0.33	+0.0
1,581,843	+		AO353_07210	0.61	-1.1
1,581,843	+		AO353_07210	0.61	-1.5
1,581,843	+		AO353_07210	0.61	-1.2
1,581,844	-		AO353_07210	0.62	-2.1
1,581,844	-		AO353_07210	0.62	+0.2
1,581,844	-		AO353_07210	0.62	-0.8
1,581,844	-		AO353_07210	0.62	-0.8
1,581,844	-		AO353_07210	0.62	+1.2
1,581,912	+		AO353_07210	0.70	+0.0
1,581,912	+		AO353_07210	0.70	-0.6
1,582,145	+				+1.0
1,582,158	-				-0.6
1,582,158	-				-1.4
1,582,158	-				+0.5