Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05010

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
1,102,771	-		AO353_05000	0.77	-0.5
1,102,846	+		AO353_05000	0.87	-1.1
1,102,846	+		AO353_05000	0.87	-0.4
1,102,847	-		AO353_05000	0.87	+0.5
1,102,847	-		AO353_05000	0.87	+0.3
1,102,884	+				-1.3
1,102,884	+				+0.6
1,102,884	+				-1.8
1,102,884	+				+1.3
1,102,884	+				-0.3
1,102,884	+				-1.3
1,102,884	+				+0.1
1,102,884	+				+1.2
1,102,884	+				-1.2
1,102,884	+				-1.8
1,102,884	+				+1.5
1,102,885	-				-1.5
1,102,885	-				-0.5
1,102,885	-				-1.2
1,102,885	-				+0.9
1,102,885	-				+1.4
1,102,885	-				-1.2
1,102,885	-				-0.8
1,102,885	-				+0.1
1,102,885	-				+1.3
1,102,885	-				-1.6
1,102,885	-				+1.5
1,102,885	-				-0.2
1,102,900	+				-1.8
1,102,900	+				+0.2
1,102,900	+				+0.6
1,102,900	+				-0.7
1,102,900	+				+0.3
1,102,900	+				+0.5
1,102,900	+				-0.8
1,102,900	+				+2.5
1,102,900	+				+1.1
1,102,900	+				+0.9
1,102,901	-				+0.9
1,102,901	-				-0.8
1,102,901	-				-0.9
1,102,901	-				+0.5
1,102,901	-				+0.3
1,102,901	-				+0.2
1,102,901	-				-2.3
1,102,901	-				-1.0
1,102,901	-				-0.5
1,102,901	-				-0.4
1,102,901	-				+1.7
1,102,928	+				-2.5
1,102,966	+		AO353_05005	0.12	-1.3
1,102,967	-		AO353_05005	0.13	-1.0
1,102,967	-		AO353_05005	0.13	+0.6
1,102,967	-		AO353_05005	0.13	-1.9
1,103,056	+		AO353_05005	0.51	-1.6
1,103,074	+		AO353_05005	0.59	-0.0
1,103,074	+		AO353_05005	0.59	-0.2
1,103,075	-		AO353_05005	0.59	-0.3
1,103,075	-		AO353_05005	0.59	+0.4
1,103,075	-		AO353_05005	0.59	-0.5
1,103,075	-		AO353_05005	0.59	-2.0
1,103,123	+		AO353_05005	0.79	-0.2
1,103,124	-		AO353_05005	0.80	+0.1
1,103,142	+		AO353_05005	0.88	+1.0
1,103,143	-		AO353_05005	0.88	+0.0
1,103,186	+				-0.5
1,103,186	+				-0.4
1,103,187	-				-1.3
1,103,244	+				-0.8
1,103,244	+				+0.0
1,103,244	+				-1.5
1,103,245	-				-0.1
1,103,245	-				-0.3
1,103,245	-				-2.3
1,103,245	-				-0.1
1,103,248	-				+2.1
1,103,341	+				+0.8
1,103,341	+				+1.0
1,103,397	+				+0.2
1,103,397	+				+0.8
1,103,397	+				+0.7
1,103,397	+				+0.7
1,103,397	+				-0.0
1,103,397	+				+0.1
1,103,397	+				+3.0
1,103,398	-				-0.5
1,103,398	-				+0.1
1,103,398	-				-0.3
1,103,398	-				-0.1
1,103,398	-				-1.9
1,103,398	-				+0.8
1,103,398	-				-0.8
1,103,398	-				+0.3
1,103,398	-				+0.7
1,103,517	+				-1.9
1,103,517	+				-0.8
1,103,517	+				+1.3
1,103,517	+				-2.1
1,103,517	+				-0.3
1,103,518	-				+0.3
1,103,518	-				+0.5
1,103,518	-				-0.5
1,103,518	-				-0.2
1,103,518	-				-1.0
1,103,518	-				+1.1
1,103,548	+				+0.6
1,103,549	-				+0.0
1,103,549	-				+1.2
1,103,549	-				+0.5
1,103,549	-				+0.5
1,103,549	-				-0.9
1,103,549	-				+0.8
1,103,564	+				-1.3
1,103,564	+				+0.7
1,103,564	+				-0.7
1,103,564	+				+1.1
1,103,564	+				+0.4
1,103,564	+				-2.1
1,103,564	+				+0.0
1,103,565	-				+0.0
1,103,565	-				+0.5
1,103,565	-				+0.1
1,103,565	-				-1.2
1,103,565	-				-0.7
1,103,579	+				-0.4
1,103,579	+				-0.4
1,103,579	+				-0.2
1,103,603	-				-0.7
1,103,668	+				+0.3
1,103,671	+				+0.5
1,103,671	+				-0.6
1,103,672	-				-2.5
1,103,672	-				-1.0
1,103,672	-				-1.1
1,103,689	+				-1.0
1,103,690	-				+0.0
1,103,697	+				+1.1
1,103,697	+				+1.8
1,103,698	-				+0.7
1,103,698	-				+0.3
1,103,698	-				-0.3
1,103,698	-				-0.7
1,103,698	-				+1.1
1,103,698	-				+0.5
1,103,698	-				+0.7
1,103,708	+				+0.3
1,103,708	+				+0.0
1,103,708	+				-0.2
1,103,708	+				-1.0
1,103,708	+				+1.8
1,103,708	+				+0.3
1,103,708	+				-1.4
1,103,708	+				-0.3
1,103,709	-				+0.1
1,103,709	-				+1.8
1,103,709	-				+0.8
1,103,709	-				-1.0
1,103,710	+				-1.3
1,103,710	+				+1.4
1,103,710	+				+0.7
1,103,710	+				+1.0
1,103,710	+				+0.4
1,103,710	+				-0.6
1,103,710	+				-0.3
1,103,711	-				+1.0
1,103,711	-				-1.6
1,103,711	-				-0.8
1,103,711	-				+0.0
1,103,711	-				+2.2
1,103,717	+				+0.3
1,103,717	+				+0.0
1,103,717	+				-1.4
1,103,718	-				-0.2
1,103,718	-				+1.3
1,103,820	+		AO353_05010	0.25	-0.6
1,103,826	+		AO353_05010	0.27	+0.3
1,103,978	+		AO353_05010	0.71	-1.2
1,104,151	+				-0.6
1,104,151	+				+0.7
1,104,151	+				-2.6
1,104,151	+				+0.1
1,104,151	+				+0.4
1,104,152	-				-0.2
1,104,152	-				-0.5
1,104,152	-				-0.7
1,104,152	-				-0.0
1,104,152	-				-0.5
1,104,152	-				+0.3
1,104,182	-				+1.0
1,104,892	-		AO353_05015	0.68	-0.2