Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5658

Experiment: copper (II) chloride 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 3 mM
6,468,562	-				-0.2
6,468,562	-				+0.1
6,468,562	-				-0.7
6,468,655	-				-2.1
6,468,655	-				-2.4
6,468,655	-				-1.2
6,468,663	-				+0.4
6,468,663	-				+0.1
6,468,689	-				-0.8
6,468,689	-				-2.5
6,468,689	-				+0.9
6,468,689	-				+0.0
6,468,689	-				+0.2
6,468,689	-				-0.1
6,468,691	-				-0.6
6,468,691	-				+0.1
6,468,691	-				-0.2
6,468,707	-				-0.6
6,468,707	-				-0.6
6,468,707	-				-0.0
6,468,773	+				+1.1
6,468,864	+				-2.5
6,468,946	-				-0.4
6,468,983	-		Pf6N2E2_5657	0.15	+0.3
6,469,188	+				-0.3
6,469,233	-		Pf6N2E2_5658	0.13	-0.6
6,469,269	-		Pf6N2E2_5658	0.27	-3.7
6,469,353	-		Pf6N2E2_5658	0.59	-1.9
6,469,353	-		Pf6N2E2_5658	0.59	-1.4
6,469,353	-		Pf6N2E2_5658	0.59	-1.3
6,469,358	+		Pf6N2E2_5658	0.61	+0.1
6,469,358	+		Pf6N2E2_5658	0.61	+0.1
6,469,358	+		Pf6N2E2_5658	0.61	-0.6
6,469,358	+		Pf6N2E2_5658	0.61	-1.3
6,469,358	+		Pf6N2E2_5658	0.61	-1.5
6,469,358	+		Pf6N2E2_5658	0.61	-2.0
6,469,358	+		Pf6N2E2_5658	0.61	-0.9
6,469,359	-		Pf6N2E2_5658	0.61	-0.5
6,469,359	-		Pf6N2E2_5658	0.61	+0.0
6,469,359	-		Pf6N2E2_5658	0.61	-3.7
6,469,450	+				-2.4
6,469,527	+				-1.7
6,469,663	+				-0.6
6,469,667	-				-0.1
6,469,697	+				-1.0
6,469,697	+				-0.1
6,469,697	+				-0.3
6,469,697	+				-0.4
6,469,697	+				+0.6
6,469,697	+				-0.2
6,469,697	+				-0.7
6,469,697	+				-0.1
6,469,698	-				-1.9
6,469,698	-				-0.6
6,469,698	-				+0.5
6,469,698	-				-0.5
6,469,698	-				+0.3
6,469,698	-				+2.3
6,469,698	-				-1.6
6,469,698	-				+0.5
6,469,698	-				-0.7
6,469,701	+				+0.7
6,469,701	+				-1.9
6,469,701	+				-1.5
6,469,701	+				-1.6
6,469,701	+				-0.2
6,469,701	+				-0.4
6,469,701	+				+0.4
6,469,701	+				-0.7
6,469,701	+				-0.7
6,469,701	+				-0.0
6,469,701	+				-0.6
6,469,702	-				+0.6
6,469,702	-				-1.2
6,469,702	-				+0.8
6,469,702	-				+0.4
6,469,702	-				-1.1
6,469,702	-				-2.4
6,469,702	-				+1.1
6,469,702	-				+0.9
6,469,702	-				+0.8
6,469,811	+				+0.1
6,469,822	+				-1.9
6,469,822	+				-0.9
6,469,822	+				-0.4
6,469,823	-				+0.4
6,469,823	-				-0.7
6,469,825	+				+0.6
6,469,825	+				-2.0
6,469,825	+				-0.7
6,469,825	+				-0.5
6,469,825	+				-2.6
6,469,825	+				+0.2
6,469,825	+				-0.4
6,469,826	-				+1.0
6,469,826	-				+0.1
6,469,826	-				-2.5
6,469,826	-				+0.5
6,469,826	-				+0.7
6,469,826	-				+0.7
6,469,844	+				-0.7
6,469,844	+				-1.6
6,469,844	+				-0.7
6,469,844	+				+0.5
6,469,844	+				+0.2
6,469,844	+				-1.1
6,469,844	+				+0.1
6,469,844	+				-0.6
6,469,845	-				-1.1
6,469,845	-				-0.7
6,469,845	-				+0.9
6,469,845	-				-2.4
6,469,845	-				-0.2
6,469,845	-				-0.4
6,469,847	-				+0.5
6,469,875	+				-0.2
6,469,875	+				+0.8
6,469,887	+				-0.3
6,469,887	+				-0.5
6,469,887	+				+0.0
6,469,887	+				-1.4
6,469,888	-				+0.2
6,469,888	-				-0.3
6,469,888	-				+1.1
6,469,888	-				+0.4
6,469,888	-				+0.0
6,469,888	-				-0.9
6,469,899	+				-1.0
6,469,900	-				+1.3
6,469,900	-				+0.4
6,469,900	-				-2.2
6,469,900	-				-0.3
6,469,925	+				+0.6
6,469,925	+				-0.9
6,469,926	-				-0.9
6,469,954	+				+0.2
6,469,955	-				+0.0
6,469,955	-				-2.5
6,469,976	+				-0.9
6,469,976	+				-1.9
6,469,977	-				-0.1
6,469,977	-				+1.7
6,469,977	-				-0.6
6,469,977	-				-0.4
6,469,988	+				-0.2
6,469,988	+				-1.6
6,469,988	+				-1.9
6,469,988	+				-0.4
6,469,988	+				-2.0
6,469,989	-				+0.1
6,469,989	-				-0.7
6,469,989	-				+1.5
6,469,989	-				-0.8
6,469,989	-				-0.4
6,470,104	+				-0.3
6,470,141	+		Pf6N2E2_5659	0.11	+0.7
6,470,141	+		Pf6N2E2_5659	0.11	-0.5
6,470,191	+		Pf6N2E2_5659	0.14	-0.9
6,470,191	+		Pf6N2E2_5659	0.14	-0.6
6,470,192	-		Pf6N2E2_5659	0.14	-1.2
6,470,192	-		Pf6N2E2_5659	0.14	+0.7
6,470,192	-		Pf6N2E2_5659	0.14	-0.7
6,470,234	+		Pf6N2E2_5659	0.16	-0.8
6,470,235	-		Pf6N2E2_5659	0.16	-1.7
6,470,318	+		Pf6N2E2_5659	0.20	+1.1
6,470,318	+		Pf6N2E2_5659	0.20	-0.7
6,470,318	+		Pf6N2E2_5659	0.20	-0.0
6,470,318	+		Pf6N2E2_5659	0.20	+0.5
6,470,318	+		Pf6N2E2_5659	0.20	+1.3
6,470,318	+		Pf6N2E2_5659	0.20	-0.6
6,470,318	+		Pf6N2E2_5659	0.20	-0.6
6,470,318	+		Pf6N2E2_5659	0.20	-2.3
6,470,318	+		Pf6N2E2_5659	0.20	+0.3
6,470,318	+		Pf6N2E2_5659	0.20	-0.4
6,470,319	-		Pf6N2E2_5659	0.20	+0.3
6,470,319	-		Pf6N2E2_5659	0.20	-1.5
6,470,319	-		Pf6N2E2_5659	0.20	+0.6
6,470,319	-		Pf6N2E2_5659	0.20	+1.4
6,470,319	-		Pf6N2E2_5659	0.20	+0.5
6,470,319	-		Pf6N2E2_5659	0.20	+0.8