Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5551

Experiment: copper (II) chloride 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 3 mM
6,365,023	+		Pf6N2E2_5549	0.60	+1.5
6,365,242	+		Pf6N2E2_5549	0.84	+0.9
6,365,242	+		Pf6N2E2_5549	0.84	+2.0
6,365,298	+				+0.7
6,365,300	+				-0.2
6,365,300	+				+2.6
6,365,300	+				-0.1
6,365,300	+				+0.6
6,365,300	+				-3.4
6,365,300	+				+2.2
6,365,301	-				+1.1
6,365,301	-				+2.3
6,365,301	-				+1.5
6,365,345	+				+0.2
6,365,345	+				+1.4
6,365,346	-				+2.7
6,365,346	-				+1.5
6,365,346	-				+1.7
6,365,463	+		Pf6N2E2_5550	0.19	+1.2
6,365,463	+		Pf6N2E2_5550	0.19	+2.5
6,365,463	+		Pf6N2E2_5550	0.19	+2.1
6,365,464	-		Pf6N2E2_5550	0.19	+1.6
6,365,464	-		Pf6N2E2_5550	0.19	+2.1
6,365,464	-		Pf6N2E2_5550	0.19	-0.5
6,365,464	-		Pf6N2E2_5550	0.19	+3.3
6,365,464	-		Pf6N2E2_5550	0.19	+2.7
6,365,464	-		Pf6N2E2_5550	0.19	+1.4
6,365,788	+				+2.8
6,365,788	+				+1.2
6,365,789	-				+1.8
6,365,789	-				+1.5
6,365,854	+				-0.2
6,365,855	-				-3.2
6,365,855	-				-4.2
6,365,898	-				-2.6
6,365,942	+		Pf6N2E2_5551	0.12	-3.5
6,365,943	-		Pf6N2E2_5551	0.12	-3.7
6,365,943	-		Pf6N2E2_5551	0.12	-3.8
6,365,943	-		Pf6N2E2_5551	0.12	-2.7
6,365,943	-		Pf6N2E2_5551	0.12	-0.9
6,365,943	-		Pf6N2E2_5551	0.12	-1.7
6,365,943	-		Pf6N2E2_5551	0.12	-2.7
6,365,943	-		Pf6N2E2_5551	0.12	-4.8
6,365,963	-		Pf6N2E2_5551	0.14	-4.1
6,365,963	-		Pf6N2E2_5551	0.14	-2.3
6,365,963	-		Pf6N2E2_5551	0.14	-2.7
6,365,969	+		Pf6N2E2_5551	0.15	-3.5
6,365,974	+		Pf6N2E2_5551	0.16	-4.1
6,366,041	+		Pf6N2E2_5551	0.23	-4.8
6,366,098	+		Pf6N2E2_5551	0.29	-2.9
6,366,098	+		Pf6N2E2_5551	0.29	-3.6
6,366,098	+		Pf6N2E2_5551	0.29	-3.4
6,366,099	-		Pf6N2E2_5551	0.29	-4.6
6,366,099	-		Pf6N2E2_5551	0.29	-3.0
6,366,170	+		Pf6N2E2_5551	0.37	-3.6
6,366,171	-		Pf6N2E2_5551	0.37	-3.9
6,366,606	+		Pf6N2E2_5551	0.84	-3.2
6,366,622	-		Pf6N2E2_5551	0.86	-4.0
6,366,812	+				-3.3
6,366,812	+				-3.2
6,366,813	-				-3.6
6,366,813	-				-4.1
6,366,826	-				-3.4
6,367,014	+		Pf6N2E2_5552	0.14	-3.8
6,367,015	-		Pf6N2E2_5552	0.14	-2.8
6,367,161	+		Pf6N2E2_5552	0.22	-1.7
6,367,161	+		Pf6N2E2_5552	0.22	-3.1
6,367,161	+		Pf6N2E2_5552	0.22	-2.1
6,367,301	+		Pf6N2E2_5552	0.30	-4.0
6,367,301	+		Pf6N2E2_5552	0.30	-3.5
6,367,301	+		Pf6N2E2_5552	0.30	-0.5
6,367,301	+		Pf6N2E2_5552	0.30	-5.2
6,367,302	-		Pf6N2E2_5552	0.30	-3.9
6,367,302	-		Pf6N2E2_5552	0.30	-4.9
6,367,302	-		Pf6N2E2_5552	0.30	-3.7
6,367,302	-		Pf6N2E2_5552	0.30	-2.5
6,367,351	+		Pf6N2E2_5552	0.32	-2.6
6,367,352	-		Pf6N2E2_5552	0.33	-4.7
6,367,596	+		Pf6N2E2_5552	0.46	-3.7
6,367,596	+		Pf6N2E2_5552	0.46	-0.0
6,367,596	+		Pf6N2E2_5552	0.46	-2.6
6,367,597	-		Pf6N2E2_5552	0.46	-4.4
6,367,597	-		Pf6N2E2_5552	0.46	-3.6
6,367,597	-		Pf6N2E2_5552	0.46	-4.1
6,367,629	+		Pf6N2E2_5552	0.48	-1.6
6,367,629	+		Pf6N2E2_5552	0.48	-4.5
6,367,629	+		Pf6N2E2_5552	0.48	-3.7
6,367,630	-		Pf6N2E2_5552	0.48	-3.8
6,367,630	-		Pf6N2E2_5552	0.48	-2.7
6,367,680	+		Pf6N2E2_5552	0.51	-3.9
6,367,680	+		Pf6N2E2_5552	0.51	-2.6
6,367,680	+		Pf6N2E2_5552	0.51	-3.2
6,367,681	-		Pf6N2E2_5552	0.51	-3.6
6,367,681	-		Pf6N2E2_5552	0.51	-2.0
6,367,681	-		Pf6N2E2_5552	0.51	-1.1
6,367,737	+		Pf6N2E2_5552	0.54	-3.2
6,367,737	+		Pf6N2E2_5552	0.54	-2.6
6,367,738	-		Pf6N2E2_5552	0.54	-2.9
6,367,738	-		Pf6N2E2_5552	0.54	-3.3