Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5422

Experiment: copper (II) chloride 3 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_5421 and Pf6N2E2_5422 overlap by 8 nucleotidesPf6N2E2_5422 and Pf6N2E2_5423 are separated by 246 nucleotides Pf6N2E2_5421 - FIG000988: Predicted permease, at 6,226,435 to 6,227,556 _5421 Pf6N2E2_5422 - FIG000906: Predicted Permease, at 6,227,549 to 6,228,610 _5422 Pf6N2E2_5423 - Translation elongation factor LepA, at 6,228,857 to 6,230,656 _5423 Position (kb) 6227 6228 6229Strain fitness (log2 ratio) -1 0 1at 6228.671 kb on + strandat 6228.765 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM
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6,228,671 + -0.1
6,228,765 + +0.2

Or see this region's nucleotide sequence