Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4243

Experiment: copper (II) chloride 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 3 mM
4,934,533	+				+0.3
4,934,534	-				-0.1
4,934,534	-				-0.2
4,934,674	+		Pf6N2E2_4242	0.15	-0.9
4,934,675	-		Pf6N2E2_4242	0.15	+0.7
4,934,775	+		Pf6N2E2_4242	0.25	-0.6
4,934,775	+		Pf6N2E2_4242	0.25	+0.5
4,934,776	-		Pf6N2E2_4242	0.25	-1.0
4,934,776	-		Pf6N2E2_4242	0.25	-0.0
4,934,776	-		Pf6N2E2_4242	0.25	-1.5
4,934,779	+		Pf6N2E2_4242	0.25	-0.1
4,934,779	+		Pf6N2E2_4242	0.25	-0.2
4,934,779	+		Pf6N2E2_4242	0.25	-1.4
4,934,779	+		Pf6N2E2_4242	0.25	+0.3
4,934,779	+		Pf6N2E2_4242	0.25	+1.9
4,934,780	-		Pf6N2E2_4242	0.26	-0.1
4,934,780	-		Pf6N2E2_4242	0.26	+0.2
4,934,827	+		Pf6N2E2_4242	0.30	+0.9
4,934,828	-		Pf6N2E2_4242	0.31	-0.1
4,934,828	-		Pf6N2E2_4242	0.31	-0.4
4,934,828	-		Pf6N2E2_4242	0.31	+0.2
4,935,013	+		Pf6N2E2_4242	0.50	+0.4
4,935,014	-		Pf6N2E2_4242	0.50	+0.2
4,935,038	-		Pf6N2E2_4242	0.52	-0.7
4,935,140	-		Pf6N2E2_4242	0.63	-0.4
4,935,149	+		Pf6N2E2_4242	0.64	-0.7
4,935,149	+		Pf6N2E2_4242	0.64	-1.9
4,935,150	-		Pf6N2E2_4242	0.64	-0.7
4,935,268	+		Pf6N2E2_4242	0.76	+0.5
4,935,268	+		Pf6N2E2_4242	0.76	+1.0
4,935,268	+		Pf6N2E2_4242	0.76	-1.8
4,935,268	+		Pf6N2E2_4242	0.76	-0.0
4,935,268	+		Pf6N2E2_4242	0.76	+1.2
4,935,268	+		Pf6N2E2_4242	0.76	+0.1
4,935,268	+		Pf6N2E2_4242	0.76	+0.8
4,935,269	-		Pf6N2E2_4242	0.76	+0.2
4,935,269	-		Pf6N2E2_4242	0.76	+0.0
4,935,269	-		Pf6N2E2_4242	0.76	-0.1
4,935,424	+				+2.3
4,935,454	+				+1.5
4,935,454	+				+0.1
4,935,455	-				+0.0
4,935,509	+				+0.2
4,935,509	+				-0.6
4,935,510	-				+0.7
4,935,510	-				-0.4
4,935,516	-				-0.1
4,935,516	-				+0.6
4,935,590	+		Pf6N2E2_4243	0.11	-0.8
4,935,591	-		Pf6N2E2_4243	0.11	+0.1
4,935,591	-		Pf6N2E2_4243	0.11	-2.1
4,935,604	+		Pf6N2E2_4243	0.13	+1.1
4,935,738	+		Pf6N2E2_4243	0.29	+0.1
4,935,738	+		Pf6N2E2_4243	0.29	+0.7
4,935,739	-		Pf6N2E2_4243	0.29	-0.5
4,935,739	-		Pf6N2E2_4243	0.29	-1.5
4,935,739	-		Pf6N2E2_4243	0.29	-1.1
4,935,739	-		Pf6N2E2_4243	0.29	-0.2
4,935,739	-		Pf6N2E2_4243	0.29	+0.3
4,935,739	-		Pf6N2E2_4243	0.29	-0.7
4,935,739	-		Pf6N2E2_4243	0.29	+0.8
4,935,777	+		Pf6N2E2_4243	0.34	+1.0
4,935,777	+		Pf6N2E2_4243	0.34	+1.1
4,935,826	+		Pf6N2E2_4243	0.40	+0.2
4,936,020	+		Pf6N2E2_4243	0.63	+0.3
4,936,021	-		Pf6N2E2_4243	0.64	-0.3
4,936,086	+		Pf6N2E2_4243	0.71	-0.2
4,936,087	-		Pf6N2E2_4243	0.72	+0.1
4,936,087	-		Pf6N2E2_4243	0.72	-1.4
4,936,107	+		Pf6N2E2_4243	0.74	+0.0
4,936,107	+		Pf6N2E2_4243	0.74	-0.3
4,936,469	+				+0.2
4,936,556	-				-0.1
4,936,593	+				-0.9
4,936,593	+				-2.9
4,936,593	+				+0.2
4,936,593	+				+0.9
4,936,594	-				-0.0
4,936,594	-				+0.0
4,936,597	+				+0.6
4,936,597	+				+0.9
4,936,597	+				-1.3
4,936,597	+				-1.0
4,936,597	+				+0.9
4,936,597	+				-0.5
4,936,598	-				-0.4
4,936,598	-				+0.1
4,936,598	-				-0.9
4,936,598	-				-1.0
4,936,598	-				+0.3
4,936,598	-				+0.9
4,936,598	-				+0.0
4,936,598	-				-0.5
4,936,598	-				-0.2
4,936,599	+				+4.0
4,936,600	-				+0.4
4,936,608	+				-2.4
4,936,608	+				-0.1
4,936,649	+				+1.5
4,936,650	-				-0.2
4,936,650	-				-0.7
4,936,650	-				-1.0
4,936,712	+				+0.2
4,936,853	+				+0.6
4,936,863	+				-3.3
4,936,863	+				+0.4
4,936,864	-				-0.9
4,936,864	-				-0.1
4,936,904	+				+0.3
4,936,904	+				-0.2
4,936,904	+				+0.7
4,936,904	+				-1.9
4,936,904	+				+0.9
4,936,910	+				-0.7
4,936,910	+				-1.8
4,936,910	+				+2.5
4,936,910	+				+1.1
4,936,910	+				+0.3
4,936,910	+				+0.6
4,936,910	+				+1.0
4,936,910	+				+0.7
4,936,910	+				+0.4
4,936,911	-				-1.4
4,936,911	-				+0.4
4,936,911	-				+0.0
4,936,911	-				+1.3
4,936,913	+				-0.5
4,936,913	+				+0.2
4,936,913	+				-0.4
4,936,913	+				+2.0
4,936,913	+				+0.8
4,936,914	-				-0.0
4,936,914	-				-0.2
4,936,914	-				-0.7
4,937,194	+		Pf6N2E2_4244	0.22	+1.0
4,937,194	+		Pf6N2E2_4244	0.22	+1.0
4,937,194	+		Pf6N2E2_4244	0.22	+0.4
4,937,195	-		Pf6N2E2_4244	0.22	+0.3
4,937,195	-		Pf6N2E2_4244	0.22	+0.8
4,937,195	-		Pf6N2E2_4244	0.22	+0.4
4,937,195	-		Pf6N2E2_4244	0.22	-0.5