Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4091

Experiment: copper (II) chloride 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 3 mM
4,767,343	-		Pf6N2E2_4089	0.74	+0.5
4,767,498	-				+1.4
4,767,508	-				-0.1
4,767,528	+				-1.5
4,767,528	+				-0.9
4,767,528	+				+0.1
4,767,529	-				-2.7
4,767,529	-				+0.5
4,767,529	-				-0.4
4,767,529	-				+1.3
4,767,529	-				+0.6
4,767,566	+				-0.4
4,767,610	-				+1.1
4,767,747	+				+0.2
4,767,747	+				+0.5
4,767,747	+				+0.7
4,767,748	-		Pf6N2E2_4090	0.10	+2.0
4,767,748	-		Pf6N2E2_4090	0.10	+1.6
4,767,748	-		Pf6N2E2_4090	0.10	+0.3
4,767,748	-		Pf6N2E2_4090	0.10	+0.7
4,767,762	+		Pf6N2E2_4090	0.13	+0.5
4,767,762	+		Pf6N2E2_4090	0.13	-1.4
4,767,762	+		Pf6N2E2_4090	0.13	+0.1
4,767,762	+		Pf6N2E2_4090	0.13	+0.0
4,767,762	+		Pf6N2E2_4090	0.13	+0.5
4,767,762	+		Pf6N2E2_4090	0.13	+0.0
4,767,763	-		Pf6N2E2_4090	0.13	+0.6
4,767,763	-		Pf6N2E2_4090	0.13	+0.8
4,767,763	-		Pf6N2E2_4090	0.13	-1.0
4,767,763	-		Pf6N2E2_4090	0.13	-0.3
4,767,826	-		Pf6N2E2_4090	0.24	+0.4
4,767,826	-		Pf6N2E2_4090	0.24	+0.2
4,768,228	-				-0.7
4,768,246	+				+1.3
4,768,262	+				-0.6
4,768,263	-				-0.4
4,768,268	+				-0.9
4,768,268	+				+0.1
4,768,268	+				-1.2
4,768,269	-				-0.4
4,768,269	-				+0.1
4,768,278	+				+0.8
4,768,278	+				-2.2
4,768,278	+				+0.3
4,768,278	+				+0.6
4,768,278	+				-0.2
4,768,279	-				-1.0
4,768,279	-				-1.4
4,768,301	-				-2.8
4,768,301	-				-4.0
4,768,301	-				-1.6
4,768,301	-				-0.3
4,768,304	+				-0.9
4,768,304	+				-0.3
4,768,304	+				+0.4
4,768,304	+				-1.2
4,768,304	+				-0.4
4,768,305	-				-1.0
4,768,305	-				-0.1
4,768,305	-				-0.3
4,768,373	+				-2.8
4,768,373	+				-2.8
4,768,373	+				-0.3
4,768,373	+				-1.6
4,768,373	+				-1.1
4,768,493	-				-1.5
4,768,493	-				-2.8
4,768,493	-				-2.2
4,768,510	-				-0.3
4,768,608	-		Pf6N2E2_4091	0.13	-2.0
4,768,637	+		Pf6N2E2_4091	0.14	-2.3
4,768,638	-		Pf6N2E2_4091	0.14	-2.3
4,768,722	+		Pf6N2E2_4091	0.18	-3.0
4,768,723	-		Pf6N2E2_4091	0.19	-2.2
4,769,006	+		Pf6N2E2_4091	0.32	-2.4
4,769,006	+		Pf6N2E2_4091	0.32	-2.6
4,769,006	+		Pf6N2E2_4091	0.32	-4.3
4,769,006	+		Pf6N2E2_4091	0.32	-1.0
4,769,006	+		Pf6N2E2_4091	0.32	-0.8
4,769,007	-		Pf6N2E2_4091	0.32	-0.8
4,769,007	-		Pf6N2E2_4091	0.32	-0.7
4,769,007	-		Pf6N2E2_4091	0.32	-2.7
4,769,007	-		Pf6N2E2_4091	0.32	-1.9
4,769,009	+		Pf6N2E2_4091	0.32	-2.7
4,769,009	+		Pf6N2E2_4091	0.32	-1.5
4,769,009	+		Pf6N2E2_4091	0.32	+0.1
4,769,009	+		Pf6N2E2_4091	0.32	-2.8
4,769,009	+		Pf6N2E2_4091	0.32	-1.0
4,769,010	-				+1.8
4,769,010	-		Pf6N2E2_4091	0.33	-2.5
4,769,010	-		Pf6N2E2_4091	0.33	-1.9
4,769,010	-		Pf6N2E2_4091	0.33	-2.8
4,769,025	-		Pf6N2E2_4091	0.33	-0.9
4,769,025	-		Pf6N2E2_4091	0.33	-1.3
4,769,025	-		Pf6N2E2_4091	0.33	+0.3
4,769,025	-		Pf6N2E2_4091	0.33	-2.1
4,769,066	+		Pf6N2E2_4091	0.35	-2.5
4,769,067	-		Pf6N2E2_4091	0.35	+0.4
4,769,067	-		Pf6N2E2_4091	0.35	-1.9
4,769,357	+		Pf6N2E2_4091	0.49	-3.5
4,769,357	+		Pf6N2E2_4091	0.49	-2.4
4,769,357	+		Pf6N2E2_4091	0.49	+0.1
4,769,357	+		Pf6N2E2_4091	0.49	-2.2
4,769,357	+		Pf6N2E2_4091	0.49	-0.6
4,769,358	-		Pf6N2E2_4091	0.49	-3.4
4,769,358	-		Pf6N2E2_4091	0.49	-3.1
4,769,468	+		Pf6N2E2_4091	0.55	-0.1
4,769,468	+		Pf6N2E2_4091	0.55	-1.7
4,769,468	+		Pf6N2E2_4091	0.55	-2.2
4,769,468	+		Pf6N2E2_4091	0.55	-1.8
4,769,469	-		Pf6N2E2_4091	0.55	-1.6
4,769,469	-		Pf6N2E2_4091	0.55	-2.3
4,769,580	-		Pf6N2E2_4091	0.60	-1.2
4,769,638	+		Pf6N2E2_4091	0.63	-0.9
4,769,638	+		Pf6N2E2_4091	0.63	-3.8
4,769,909	+		Pf6N2E2_4091	0.76	-0.8
4,770,113	+		Pf6N2E2_4091	0.86	-3.1
4,770,113	+		Pf6N2E2_4091	0.86	-1.0
4,770,170	+		Pf6N2E2_4091	0.89	-2.2
4,770,170	+		Pf6N2E2_4091	0.89	-3.1
4,770,170	+		Pf6N2E2_4091	0.89	-2.8
4,770,170	+		Pf6N2E2_4091	0.89	+0.1
4,770,171	-		Pf6N2E2_4091	0.89	-1.3
4,770,171	-		Pf6N2E2_4091	0.89	-1.6
4,770,173	+		Pf6N2E2_4091	0.89	-0.4
4,770,173	+		Pf6N2E2_4091	0.89	-3.7
4,770,173	+		Pf6N2E2_4091	0.89	-0.4
4,770,173	+		Pf6N2E2_4091	0.89	-1.7
4,770,173	+		Pf6N2E2_4091	0.89	-1.5
4,770,173	+		Pf6N2E2_4091	0.89	-3.5
4,770,174	-		Pf6N2E2_4091	0.89	-2.3
4,770,174	-		Pf6N2E2_4091	0.89	-1.4
4,770,174	-		Pf6N2E2_4091	0.89	-0.5
4,770,174	-		Pf6N2E2_4091	0.89	-1.4
4,770,174	-		Pf6N2E2_4091	0.89	-1.1
4,770,174	-		Pf6N2E2_4091	0.89	-2.2
4,770,179	+		Pf6N2E2_4091	0.89	-0.5
4,770,179	+		Pf6N2E2_4091	0.89	-4.4
4,770,179	+		Pf6N2E2_4091	0.89	-2.6
4,770,179	+		Pf6N2E2_4091	0.89	-0.6
4,770,179	+		Pf6N2E2_4091	0.89	-1.5
4,770,179	+		Pf6N2E2_4091	0.89	-2.0
4,770,179	+		Pf6N2E2_4091	0.89	-0.7
4,770,179	+		Pf6N2E2_4091	0.89	-2.1
4,770,180	-		Pf6N2E2_4091	0.90	-2.8
4,770,180	-		Pf6N2E2_4091	0.90	-2.5
4,770,180	-		Pf6N2E2_4091	0.90	-2.6
4,770,180	-		Pf6N2E2_4091	0.90	-0.8
4,770,180	-		Pf6N2E2_4091	0.90	-0.8
4,770,180	-		Pf6N2E2_4091	0.90	-2.6
4,770,180	-		Pf6N2E2_4091	0.90	-0.9
4,770,411	+				-4.1
4,770,411	+				-0.6
4,770,585	+		Pf6N2E2_4092	0.68	-0.5
4,770,585	+		Pf6N2E2_4092	0.68	-0.7
4,770,586	-		Pf6N2E2_4092	0.68	+0.3
4,770,586	-		Pf6N2E2_4092	0.68	+0.3
4,770,712	+				-0.7
4,770,712	+				-0.6
4,770,713	-				+0.1
4,770,713	-				-0.5
4,770,713	-				+0.7
4,770,713	-				-0.6
4,770,713	-				+2.3
4,770,716	+				-0.7
4,770,716	+				+0.1
4,770,716	+				+0.4
4,770,716	+				+0.7
4,770,716	+				+1.1
4,770,716	+				+0.5
4,770,716	+				-0.8
4,770,716	+				-0.7
4,770,716	+				+0.5
4,770,716	+				-2.4
4,770,716	+				-1.2
4,770,716	+				-1.8
4,770,716	+				-0.6
4,770,716	+				+0.2
4,770,716	+				+0.3
4,770,716	+				+0.5
4,770,716	+				-0.6
4,770,716	+				+0.3
4,770,716	+				-2.5
4,770,716	+				+0.0
4,770,716	+				+0.3
4,770,716	+				+0.8
4,770,716	+				+1.5
4,770,716	+				+0.5
4,770,716	+				+0.9
4,770,716	+				+0.4
4,770,716	+				-1.2
4,770,716	+				+0.6
4,770,716	+				-0.1
4,770,716	+				-0.6
4,770,716	+				+0.3
4,770,716	+				-0.6
4,770,716	+				+1.4
4,770,716	+				+0.4
4,770,716	+				+1.6
4,770,716	+				-0.4
4,770,716	+				+0.5
4,770,716	+				+0.9
4,770,716	+				+0.4
4,770,716	+				+0.4
4,770,716	+				+1.4
4,770,717	-				+1.0
4,770,717	-				-0.3
4,770,717	-				-1.3
4,770,717	-				-0.7
4,770,717	-				-0.7
4,770,717	-				+0.7
4,770,717	-				+1.7
4,770,717	-				+0.1
4,770,717	-				+0.2
4,770,717	-				+0.8
4,770,717	-				-1.0
4,770,717	-				-0.2
4,770,717	-				+1.2
4,770,717	-				-0.3
4,770,717	-				+0.3
4,770,717	-				+0.8
4,770,717	-				+0.2
4,770,717	-				-0.2
4,770,717	-				+1.7
4,770,717	-				-1.6
4,770,717	-				+0.6
4,770,717	-				-0.3
4,770,717	-				+0.0
4,770,717	-				-0.5
4,770,717	-				-2.4
4,770,717	-				-2.7
4,770,717	-				+0.1
4,770,717	-				+0.2
4,770,717	-				-0.3
4,770,717	-				+0.4
4,770,717	-				+1.0
4,770,717	-				+0.5
4,770,717	-				+0.5
4,770,717	-				+0.7
4,770,717	-				-0.0
4,770,717	-				-0.1
4,770,717	-				+1.2
4,770,717	-				-0.7
4,770,717	-				-2.4
4,770,717	-				-1.2
4,770,717	-				-0.0
4,770,717	-				-1.5
4,770,717	-				-0.3
4,770,717	-				-2.7
4,770,718	+				-0.9
4,770,718	+				-1.7
4,770,718	+				-0.1
4,770,718	+				-0.5
4,770,718	+				-0.6
4,770,718	+				-1.0
4,770,718	+				-0.2
4,770,718	+				+1.4
4,770,718	+				+0.1
4,770,718	+				+0.4
4,770,718	+				-0.0
4,770,718	+				+0.7
4,770,718	+				-3.2
4,770,718	+				+0.4
4,770,718	+				-0.1
4,770,718	+				+0.9
4,770,719	-				-0.2
4,770,719	-				+0.7
4,770,719	-				+0.3
4,770,719	-				+0.4
4,770,719	-				-1.3
4,770,719	-				-0.2
4,770,719	-				-0.6
4,770,719	-				+1.0
4,770,719	-				+0.4
4,770,719	-				+0.3
4,770,719	-				+0.1
4,770,719	-				-0.0
4,770,719	-				-0.8
4,770,719	-				-1.5
4,770,719	-				+0.6
4,770,719	-				+0.6
4,770,719	-				-2.5
4,770,719	-				-0.5
4,770,719	-				+0.4
4,770,719	-				+1.4
4,770,719	-				-1.3
4,770,719	-				+0.0
4,770,719	-				-1.7
4,770,720	+				+0.6
4,770,720	+				-0.7
4,770,720	+				-1.1
4,770,720	+				+0.1
4,770,720	+				+1.1
4,770,720	+				+0.6
4,770,720	+				-0.1
4,770,720	+				+0.1
4,770,721	-				+1.7
4,770,721	-				-0.2
4,770,721	-				+0.6
4,770,721	-				+1.7
4,770,721	-				-0.2
4,770,818	+				+0.8
4,770,818	+				+0.4
4,770,819	-				-0.3
4,770,910	+				-0.8
4,770,911	-				-0.3
4,771,002	+		Pf6N2E2_4093	0.11	-1.5
4,771,125	-		Pf6N2E2_4093	0.17	-1.0