Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3429

Experiment: copper (II) chloride 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 3 mM
3,985,361	+				+0.2
3,985,361	+				+0.3
3,985,361	+				+1.0
3,985,364	+				-0.3
3,985,364	+				+0.7
3,985,365	-				-0.3
3,985,365	-				-3.2
3,985,365	-				+1.1
3,985,373	+				+1.0
3,985,381	+				-0.3
3,985,381	+				+0.2
3,985,382	-				+0.3
3,985,382	-				+0.9
3,985,382	-				-2.4
3,985,382	-				+0.2
3,985,488	-				+1.0
3,985,922	+		Pf6N2E2_3428	0.70	-0.2
3,985,922	+		Pf6N2E2_3428	0.70	+0.4
3,985,922	+		Pf6N2E2_3428	0.70	-0.1
3,985,923	-		Pf6N2E2_3428	0.70	-1.1
3,985,950	-		Pf6N2E2_3428	0.74	+0.1
3,986,005	-		Pf6N2E2_3428	0.84	-0.5
3,986,024	-		Pf6N2E2_3428	0.87	-1.9
3,986,024	-		Pf6N2E2_3428	0.87	+0.3
3,986,131	+				+1.1
3,986,131	+				+0.5
3,986,132	-				-0.1
3,986,132	-				-1.0
3,986,160	-				-2.3
3,986,195	+				+0.6
3,986,196	-				+1.0
3,986,198	+				+0.8
3,986,198	+				+0.6
3,986,198	+				-0.5
3,986,198	+				-0.1
3,986,198	+				-0.8
3,986,198	+				-0.0
3,986,198	+				+1.2
3,986,198	+				+0.6
3,986,199	-				-1.2
3,986,199	-				-1.4
3,986,199	-				-0.6
3,986,199	-				-2.5
3,986,199	-				-0.1
3,986,199	-				-0.1
3,986,199	-				+0.3
3,986,199	-				-1.8
3,986,199	-				-0.5
3,986,203	-				+0.9
3,986,203	-				-2.5
3,986,220	+				-3.3
3,986,221	-				+0.1
3,986,221	-				+0.7
3,986,241	+				+0.5
3,986,242	-				-0.9
3,986,271	-				-0.3
3,986,271	-				-2.5
3,986,289	+				+0.8
3,986,289	+				+0.8
3,986,323	+				+1.6
3,986,324	-				+0.1
3,986,324	-				-1.9
3,986,324	-				-0.7
3,986,324	-				+0.7
3,986,327	+				-0.1
3,986,328	-		Pf6N2E2_3429	0.10	-0.6
3,986,328	-		Pf6N2E2_3429	0.10	-1.2
3,986,384	+		Pf6N2E2_3429	0.53	-1.8
3,986,384	+		Pf6N2E2_3429	0.53	-1.7
3,986,385	-		Pf6N2E2_3429	0.54	-0.8
3,986,436	-				-0.0
3,986,447	+				+0.7
3,986,447	+				-0.1
3,986,448	-				-0.8
3,986,448	-				-0.1
3,986,448	-				+0.2
3,986,448	-				-0.9
3,986,448	-				-0.1
3,986,448	-				+0.7
3,986,700	-		Pf6N2E2_3430	0.11	+0.3
3,986,744	+		Pf6N2E2_3430	0.13	+0.2
3,986,744	+		Pf6N2E2_3430	0.13	+0.1
3,986,870	+		Pf6N2E2_3430	0.18	+0.4
3,986,870	+		Pf6N2E2_3430	0.18	+0.9
3,986,870	+		Pf6N2E2_3430	0.18	-0.4
3,986,871	-		Pf6N2E2_3430	0.18	-0.8
3,986,871	-		Pf6N2E2_3430	0.18	+0.9
3,986,871	-		Pf6N2E2_3430	0.18	+0.3
3,986,871	-		Pf6N2E2_3430	0.18	+1.7
3,987,000	-		Pf6N2E2_3430	0.24	-0.8
3,987,000	-		Pf6N2E2_3430	0.24	+1.1
3,987,000	-		Pf6N2E2_3430	0.24	-2.8
3,987,179	+		Pf6N2E2_3430	0.32	-0.7
3,987,179	+		Pf6N2E2_3430	0.32	+0.8
3,987,180	-		Pf6N2E2_3430	0.32	+0.0