Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2265

Experiment: copper (II) chloride 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 3 mM
2,678,703	+				-1.2
2,678,704	-				-0.3
2,678,722	+				-2.1
2,678,722	+				+0.1
2,678,722	+				-1.0
2,678,722	+				-0.1
2,678,723	-				-0.1
2,678,742	-				-0.6
2,678,761	-				+0.4
2,678,799	+				-0.8
2,678,799	+				+1.3
2,678,800	-				+0.2
2,678,850	+				+0.2
2,678,892	-		Pf6N2E2_2264	0.10	-1.3
2,678,901	-		Pf6N2E2_2264	0.11	-1.8
2,679,002	+		Pf6N2E2_2264	0.24	+1.4
2,679,002	+		Pf6N2E2_2264	0.24	+1.3
2,679,003	-		Pf6N2E2_2264	0.24	+1.0
2,679,003	-		Pf6N2E2_2264	0.24	+0.3
2,679,173	+		Pf6N2E2_2264	0.44	+2.3
2,679,173	+		Pf6N2E2_2264	0.44	+1.9
2,679,229	-		Pf6N2E2_2264	0.51	-0.1
2,679,229	-		Pf6N2E2_2264	0.51	-1.5
2,679,366	-		Pf6N2E2_2264	0.67	-1.2
2,679,590	+				+2.3
2,679,591	-				+0.5
2,679,669	+				+2.9
2,679,670	-				-0.5
2,679,699	+				+2.7
2,679,699	+				+4.7
2,679,699	+				+2.6
2,679,700	-				-1.4
2,679,738	+				+2.7
2,679,776	-		Pf6N2E2_2265	0.14	-1.4
2,679,836	-		Pf6N2E2_2265	0.25	-3.6
2,680,030	+		Pf6N2E2_2265	0.61	+2.2
2,680,031	-		Pf6N2E2_2265	0.61	-3.7
2,680,031	-		Pf6N2E2_2265	0.61	-2.1
2,680,031	-		Pf6N2E2_2265	0.61	-3.5
2,680,041	-		Pf6N2E2_2265	0.63	-3.4
2,680,193	-				-3.2
2,680,193	-				-0.9
2,680,193	-				-3.9
2,680,243	+				+2.1
2,680,243	+				+2.6
2,680,243	+				+2.7
2,680,243	+				+2.2
2,680,243	+				+3.4
2,680,243	+				+1.5
2,680,243	+				+2.9
2,680,243	+				+3.1
2,680,244	-				-2.2
2,680,244	-				-3.9
2,680,244	-				-2.6
2,680,244	-				-2.3
2,680,244	-				-4.9
2,680,244	-				-3.7
2,680,244	-				-3.4
2,680,244	-				-4.1
2,680,244	-				-3.3
2,680,244	-				-1.4
2,680,249	+				+2.1
2,680,250	-				-2.8
2,680,250	-				-2.8
2,680,250	-				-3.4
2,680,262	+				+2.3
2,680,262	+				+2.7
2,680,262	+				+1.7
2,680,262	+				+3.5
2,680,263	-				-4.5
2,680,263	-				-3.2
2,680,263	-				-1.8
2,680,263	-				-4.3
2,680,286	+				+1.7
2,680,286	+				+3.8
2,680,286	+				+3.0
2,680,287	-				-4.6
2,680,323	+				+1.2
2,680,323	+				+3.4
2,680,323	+				+2.5
2,680,323	+				+2.9
2,680,323	+				+3.4
2,680,323	+				+2.4
2,680,324	-				-0.6
2,680,324	-				-3.5
2,680,324	-				-2.6
2,680,364	+				+3.5
2,680,364	+				+3.4
2,680,365	-				-4.8
2,680,365	-				-4.9
2,680,365	-				-3.6
2,680,365	-				-2.6
2,680,378	+				+3.0
2,680,378	+				+2.6
2,680,443	+				-2.8
2,680,444	-				-2.5
2,680,533	+		Pf6N2E2_2266	0.19	-3.9
2,680,616	+		Pf6N2E2_2266	0.32	-0.9
2,680,617	-		Pf6N2E2_2266	0.32	-3.6
2,680,692	+		Pf6N2E2_2266	0.43	-3.6
2,680,693	-		Pf6N2E2_2266	0.43	-4.5
2,680,693	-				-0.7
2,681,055	+				-4.1
2,681,055	+				-2.9
2,681,055	+				-3.7
2,681,055	+				-2.9
2,681,055	+				-3.7
2,681,055	+				-2.9
2,681,056	-				-3.8
2,681,056	-				-3.7
2,681,056	-				-4.0