Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1475

Experiment: copper (II) chloride 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 3 mM
1,724,113	-				+0.2
1,724,328	-		Pf6N2E2_1474	0.38	-2.4
1,724,328	-		Pf6N2E2_1474	0.38	+0.9
1,724,328	-		Pf6N2E2_1474	0.38	+1.6
1,724,328	-		Pf6N2E2_1474	0.38	+1.7
1,724,334	-		Pf6N2E2_1474	0.39	-0.6
1,724,334	-		Pf6N2E2_1474	0.39	-0.0
1,724,372	-		Pf6N2E2_1474	0.45	+0.4
1,724,395	+		Pf6N2E2_1474	0.49	-0.1
1,724,396	-		Pf6N2E2_1474	0.49	-1.7
1,724,396	-		Pf6N2E2_1474	0.49	-1.4
1,724,434	+		Pf6N2E2_1474	0.56	+0.6
1,724,459	+		Pf6N2E2_1474	0.60	+0.7
1,724,459	+		Pf6N2E2_1474	0.60	+0.7
1,724,460	-		Pf6N2E2_1474	0.60	-1.5
1,724,460	-		Pf6N2E2_1474	0.60	-0.5
1,724,460	-		Pf6N2E2_1474	0.60	-1.5
1,724,460	-		Pf6N2E2_1474	0.60	+0.0
1,724,560	-		Pf6N2E2_1474	0.77	-3.0
1,724,560	-		Pf6N2E2_1474	0.77	+0.0
1,724,760	-				+0.5
1,724,800	-				+0.4
1,724,848	+				-1.8
1,725,022	+				-1.7
1,725,023	-				-0.0
1,725,023	-				+1.3
1,725,023	-				-2.4
1,725,088	+				+0.1
1,725,089	-				+0.4
1,725,131	+		Pf6N2E2_1475	0.15	-0.8
1,725,131	+		Pf6N2E2_1475	0.15	+0.9
1,725,132	-		Pf6N2E2_1475	0.15	+0.5
1,725,143	-		Pf6N2E2_1475	0.16	+0.8
1,725,148	+		Pf6N2E2_1475	0.17	+0.0
1,725,148	+		Pf6N2E2_1475	0.17	+0.4
1,725,149	-		Pf6N2E2_1475	0.17	+2.6
1,725,153	+		Pf6N2E2_1475	0.18	+0.6
1,725,153	+		Pf6N2E2_1475	0.18	+1.4
1,725,153	+		Pf6N2E2_1475	0.18	+1.5
1,725,153	+		Pf6N2E2_1475	0.18	-0.2
1,725,153	+		Pf6N2E2_1475	0.18	+0.7
1,725,463	+		Pf6N2E2_1475	0.60	-3.0
1,725,464	-		Pf6N2E2_1475	0.60	+0.2
1,725,464	-		Pf6N2E2_1475	0.60	-1.1
1,725,613	-		Pf6N2E2_1475	0.80	+0.9
1,725,613	-		Pf6N2E2_1475	0.80	-0.6
1,725,681	+		Pf6N2E2_1475	0.89	+0.8
1,725,681	+		Pf6N2E2_1475	0.89	-0.9
1,725,681	+		Pf6N2E2_1475	0.89	+3.1
1,725,681	+		Pf6N2E2_1475	0.89	+0.7
1,725,681	+		Pf6N2E2_1475	0.89	+0.0
1,725,681	+		Pf6N2E2_1475	0.89	+2.2
1,725,752	+				-2.0
1,725,752	+				-2.0
1,725,752	+				+0.7
1,725,752	+				-0.1
1,725,753	-				-1.0
1,725,753	-				-0.5
1,725,753	-				-1.6
1,725,753	-				+0.3
1,725,753	-				+1.2
1,725,753	-				+0.7
1,725,753	-				+0.4
1,725,753	-				-0.0
1,725,753	-				+0.3
1,725,753	-				+0.2
1,725,756	+				-0.4
1,725,756	+				-1.8
1,725,757	-				+0.1
1,725,757	-				+2.1
1,725,774	+				+0.0
1,725,774	+				+1.1
1,725,775	-				+0.6
1,725,775	-				-0.6
1,725,775	-				+0.1
1,725,775	-				-3.1
1,725,793	+				-0.1
1,725,793	+				+0.1
1,725,793	+				-0.9
1,725,794	-				+0.6
1,725,811	+				+0.2
1,725,812	-				+0.7
1,725,882	+				+0.2
1,725,882	+				+0.2
1,725,882	+				-0.3
1,725,883	-				+0.7
1,725,883	-				+0.4
1,725,891	-		Pf6N2E2_1476	0.11	+0.2
1,725,969	-		Pf6N2E2_1476	0.37	+0.0
1,725,977	+		Pf6N2E2_1476	0.40	+0.8
1,726,046	+		Pf6N2E2_1476	0.62	-0.3
1,726,047	-		Pf6N2E2_1476	0.62	-0.5
1,726,047	-		Pf6N2E2_1476	0.62	-0.0
1,726,100	+		Pf6N2E2_1476	0.80	-0.5
1,726,100	+		Pf6N2E2_1476	0.80	-1.2
1,726,139	+				-1.0
1,726,139	+				-0.1
1,726,139	+				-1.0
1,726,155	+				-1.1
1,726,155	+				+1.2
1,726,197	+				-0.4
1,726,207	-				-0.2
1,726,280	+				+0.9
1,726,280	+				+0.2
1,726,280	+				-1.0
1,726,280	+				-0.8
1,726,280	+				+0.3
1,726,280	+				-0.8
1,726,281	-				+0.4
1,726,281	-				+0.4
1,726,450	+		Pf6N2E2_1477	0.24	-1.2
1,726,450	+		Pf6N2E2_1477	0.24	-0.4
1,726,450	+		Pf6N2E2_1477	0.24	+1.0
1,726,450	+		Pf6N2E2_1477	0.24	+0.7
1,726,450	+		Pf6N2E2_1477	0.24	-2.9
1,726,450	+		Pf6N2E2_1477	0.24	-0.0
1,726,451	-		Pf6N2E2_1477	0.24	+0.3
1,726,451	-		Pf6N2E2_1477	0.24	-0.8
1,726,451	-		Pf6N2E2_1477	0.24	+0.7
1,726,607	+		Pf6N2E2_1477	0.78	+0.9
1,726,607	+		Pf6N2E2_1477	0.78	+0.9
1,726,607	+		Pf6N2E2_1477	0.78	+0.2
1,726,746	-				+1.5