Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03270

Experiment: PYE with copper (II) chloride 0.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with copper (II) chloride 0.25 mM
3,439,699	+		CCNA_03271	0.26	-0.5
3,439,707	-		CCNA_03271	0.27	+2.5
3,439,707	-		CCNA_03271	0.27	+1.7
3,439,714	+		CCNA_03271	0.28	+0.0
3,439,714	+		CCNA_03271	0.28	-1.2
3,439,714	+		CCNA_03271	0.28	+0.0
3,439,714	-		CCNA_03271	0.28	+2.6
3,439,714	-		CCNA_03271	0.28	+3.0
3,439,719	+		CCNA_03271	0.28	-0.7
3,439,719	+		CCNA_03271	0.28	-0.9
3,439,719	+		CCNA_03271	0.28	-3.3
3,439,727	-		CCNA_03271	0.29	+2.9
3,439,727	-		CCNA_03271	0.29	+2.9
3,439,727	-		CCNA_03271	0.29	+2.7
3,439,727	-		CCNA_03271	0.29	+2.9
3,439,727	-		CCNA_03271	0.29	+3.1
3,439,730	-		CCNA_03271	0.29	+3.1
3,439,737	+		CCNA_03271	0.29	-1.1
3,439,779	+		CCNA_03271	0.33	+0.0
3,439,794	+		CCNA_03271	0.34	-1.3
3,439,811	+		CCNA_03271	0.36	-0.3
3,439,821	-		CCNA_03271	0.36	+2.9
3,439,828	+		CCNA_03271	0.37	-0.1
3,439,855	-		CCNA_03271	0.39	+2.9
3,439,871	+		CCNA_03271	0.41	-0.6
3,439,873	+		CCNA_03271	0.41	-0.8
3,439,874	-		CCNA_03271	0.41	+2.9
3,439,874	-		CCNA_03271	0.41	+2.8
3,439,874	-		CCNA_03271	0.41	+2.9
3,439,881	-		CCNA_03271	0.41	+3.2
3,439,915	+		CCNA_03271	0.44	-0.5
3,439,973	+		CCNA_03271	0.49	-2.2
3,439,981	-		CCNA_03271	0.50	+3.1
3,439,981	-		CCNA_03271	0.50	+3.3
3,440,033	-		CCNA_03271	0.54	+2.9
3,440,033	-		CCNA_03271	0.54	+3.0
3,440,095	-		CCNA_03271	0.59	+3.3
3,440,154	-		CCNA_03271	0.64	+2.3
3,440,154	-		CCNA_03271	0.64	+3.0
3,440,192	-		CCNA_03271	0.67	+2.7
3,440,194	+		CCNA_03271	0.67	-0.3
3,440,202	-		CCNA_03271	0.68	+3.0
3,440,216	+		CCNA_03271	0.69	-1.0
3,440,216	+		CCNA_03271	0.69	-0.5
3,440,216	+		CCNA_03271	0.69	-0.5
3,440,224	-		CCNA_03271	0.70	+2.8
3,440,224	-		CCNA_03271	0.70	+2.9
3,440,236	+		CCNA_03271	0.71	+4.6
3,440,244	-		CCNA_03271	0.71	+2.9
3,440,249	+		CCNA_03271	0.72	-1.5
3,440,257	-		CCNA_03271	0.73	+3.5
3,440,257	-		CCNA_03271	0.73	+2.9
3,440,257	-		CCNA_03271	0.73	+2.7
3,440,257	-		CCNA_03271	0.73	+2.9
3,440,257	-		CCNA_03271	0.73	+2.4
3,440,297	+		CCNA_03271	0.76	-0.5
3,440,303	-		CCNA_03271	0.76	+2.5
3,440,308	-		CCNA_03271	0.77	+3.1
3,440,313	-		CCNA_03271	0.77	+2.5
3,440,350	+		CCNA_03271	0.80	-0.6
3,440,367	-		CCNA_03271	0.82	+2.8
3,440,397	-		CCNA_03271	0.84	+2.7
3,440,454	+		CCNA_03271	0.89	+0.2
3,440,469	-				+2.3
3,440,491	-				+2.8
3,440,491	-				+2.5
3,440,502	+				-1.4
3,440,507	+				+0.3
3,440,507	+				+0.6
3,440,515	-				+2.5
3,440,515	-				+2.7
3,440,534	+				-0.7
3,440,542	-				+2.5
3,440,591	-				+2.1
3,440,591	-				+2.0
3,440,614	-				+2.3
3,440,616	-				+2.6
3,440,645	-				-1.2
3,440,726	+				+0.7
3,440,734	-				-0.1
3,440,734	-				-1.1
3,440,735	+				-0.2
3,440,736	-				-1.8
3,440,751	+		CCNA_03270	0.13	+0.4
3,440,759	-		CCNA_03270	0.14	+0.7
3,440,777	+		CCNA_03270	0.18	+0.7
3,440,787	+		CCNA_03270	0.20	+0.3
3,440,795	-		CCNA_03270	0.22	+0.2
3,440,795	-		CCNA_03270	0.22	+0.4
3,440,828	-		CCNA_03270	0.29	-1.8
3,440,863	+		CCNA_03270	0.37	-0.2
3,440,871	-		CCNA_03270	0.39	-1.1
3,440,872	-		CCNA_03270	0.39	+0.6
3,440,885	+		CCNA_03270	0.42	-0.4
3,440,893	-		CCNA_03270	0.44	-0.6
3,440,893	-		CCNA_03270	0.44	-1.2
3,440,908	-		CCNA_03270	0.47	+0.6
3,440,910	+		CCNA_03270	0.47	+1.5
3,440,910	+		CCNA_03270	0.47	+2.2
3,440,910	+		CCNA_03270	0.47	+0.2
3,440,916	+		CCNA_03270	0.49	+0.6
3,440,924	-		CCNA_03270	0.50	+1.1
3,440,926	+		CCNA_03270	0.51	-0.5
3,440,946	+		CCNA_03270	0.55	+0.9
3,440,958	-		CCNA_03270	0.58	-0.1
3,440,960	+		CCNA_03270	0.58	-0.2
3,440,968	-		CCNA_03270	0.60	-1.8
3,440,968	-		CCNA_03270	0.60	+1.2
3,441,008	-		CCNA_03270	0.69	+1.6
3,441,017	+		CCNA_03270	0.71	-0.5
3,441,027	+		CCNA_03270	0.73	+1.2
3,441,027	+		CCNA_03270	0.73	-0.6
3,441,035	-		CCNA_03270	0.75	+1.7
3,441,035	-		CCNA_03270	0.75	-1.5
3,441,070	-		CCNA_03270	0.82	-0.3
3,441,098	+		CCNA_03270	0.88	+4.4
3,441,115	+				+0.2
3,441,127	-				+1.0
3,441,160	+				-2.0
3,441,160	+				-1.0
3,441,188	+				-1.6
3,441,226	+				-0.1
3,441,232	+				-0.2
3,441,236	+				+0.5
3,441,239	-				-1.3
3,441,277	+				+0.0
3,441,277	+				+1.9
3,441,292	+				+0.2
3,441,300	-				+1.0
3,441,307	+				-0.1
3,441,324	-				-0.8
3,441,348	+				-0.5
3,441,356	-				-0.6
3,441,359	+		CCNA_03272	0.10	+0.7
3,441,366	-		CCNA_03272	0.11	-1.0
3,441,376	+		CCNA_03272	0.11	-0.7
3,441,379	-		CCNA_03272	0.12	-0.2
3,441,437	-		CCNA_03272	0.16	-0.6
3,441,450	-		CCNA_03272	0.17	-1.8
3,441,493	+		CCNA_03272	0.20	-0.3
3,441,494	-		CCNA_03272	0.20	-0.6
3,441,528	-		CCNA_03272	0.22	-1.0
3,441,541	+		CCNA_03272	0.23	-0.8
3,441,544	+		CCNA_03272	0.23	-0.7
3,441,582	+		CCNA_03272	0.26	+2.6
3,441,582	+		CCNA_03272	0.26	+2.4
3,441,585	-		CCNA_03272	0.26	-2.4
3,441,585	-		CCNA_03272	0.26	+1.0
3,441,587	+		CCNA_03272	0.26	+0.1
3,441,588	-		CCNA_03272	0.26	-0.1
3,441,590	-		CCNA_03272	0.26	-1.1
3,441,592	+		CCNA_03272	0.27	-1.3
3,441,602	+		CCNA_03272	0.27	-1.8
3,441,610	+		CCNA_03272	0.28	-0.6
3,441,610	-		CCNA_03272	0.28	-0.1
3,441,618	-		CCNA_03272	0.28	-0.6
3,441,658	+		CCNA_03272	0.31	+1.4
3,441,694	+		CCNA_03272	0.34	+0.0
3,441,694	+		CCNA_03272	0.34	+0.8
3,441,694	+		CCNA_03272	0.34	+0.4
3,441,694	+		CCNA_03272	0.34	-0.8
3,441,694	+		CCNA_03272	0.34	-0.6
3,441,694	+		CCNA_03272	0.34	-1.3
3,441,694	+		CCNA_03272	0.34	+0.4
3,441,702	-				+0.8
3,441,702	-		CCNA_03272	0.34	-1.1
3,441,702	-		CCNA_03272	0.34	-1.5
3,441,702	-		CCNA_03272	0.34	+0.4
3,441,726	-		CCNA_03272	0.36	-0.1
3,441,739	+		CCNA_03272	0.37	-2.2
3,441,739	+		CCNA_03272	0.37	+0.4
3,441,747	-		CCNA_03272	0.37	-1.2
3,441,770	-		CCNA_03272	0.39	-2.0
3,441,774	+		CCNA_03272	0.39	-0.3
3,441,785	+		CCNA_03272	0.40	+1.4
3,441,805	-		CCNA_03272	0.42	+1.7
3,441,810	-		CCNA_03272	0.42	+1.0
3,441,832	+		CCNA_03272	0.43	-0.1
3,441,835	-		CCNA_03272	0.44	-0.1
3,441,840	-		CCNA_03272	0.44	-1.8
3,441,840	-		CCNA_03272	0.44	-0.9
3,441,840	-		CCNA_03272	0.44	-1.9
3,441,840	-		CCNA_03272	0.44	-1.1
3,441,840	-		CCNA_03272	0.44	-0.4
3,441,840	-		CCNA_03272	0.44	-0.9
3,441,850	+		CCNA_03272	0.45	+1.6
3,441,895	+		CCNA_03272	0.48	-1.8
3,441,912	+		CCNA_03272	0.49	-0.6
3,441,920	-		CCNA_03272	0.50	+0.5
3,441,922	-		CCNA_03272	0.50	-0.2
3,441,922	-		CCNA_03272	0.50	-2.0
3,441,932	-		CCNA_03272	0.50	-0.6
3,441,949	-		CCNA_03272	0.52	+0.6
3,441,954	-		CCNA_03272	0.52	-0.9
3,441,961	+		CCNA_03272	0.53	-0.8
3,442,024	+		CCNA_03272	0.57	-0.5
3,442,030	-		CCNA_03272	0.57	-0.6
3,442,044	-		CCNA_03272	0.58	-1.5
3,442,084	+		CCNA_03272	0.61	-2.1
3,442,084	+		CCNA_03272	0.61	-1.4
3,442,085	-		CCNA_03272	0.61	-1.3
3,442,089	+		CCNA_03272	0.62	-1.1
3,442,089	+		CCNA_03272	0.62	+1.3
3,442,089	+		CCNA_03272	0.62	-2.6
3,442,089	+		CCNA_03272	0.62	+1.0
3,442,089	+		CCNA_03272	0.62	-1.7
3,442,089	+		CCNA_03272	0.62	-1.6
3,442,089	+		CCNA_03272	0.62	+0.0
3,442,089	+		CCNA_03272	0.62	-0.5
3,442,089	+		CCNA_03272	0.62	-1.9
3,442,092	-		CCNA_03272	0.62	-1.0
3,442,092	-		CCNA_03272	0.62	+0.0
3,442,097	-		CCNA_03272	0.62	+0.4
3,442,097	-		CCNA_03272	0.62	-1.3
3,442,097	-		CCNA_03272	0.62	-1.9
3,442,097	-		CCNA_03272	0.62	-0.4
3,442,097	-		CCNA_03272	0.62	-0.3
3,442,097	-		CCNA_03272	0.62	+0.0
3,442,097	-		CCNA_03272	0.62	+0.8
3,442,097	-		CCNA_03272	0.62	-2.2
3,442,097	-		CCNA_03272	0.62	-0.9
3,442,097	-		CCNA_03272	0.62	+0.0
3,442,097	-		CCNA_03272	0.62	-1.1
3,442,098	+		CCNA_03272	0.62	-1.3
3,442,100	+		CCNA_03272	0.62	-0.4
3,442,106	-		CCNA_03272	0.63	-0.3
3,442,108	-		CCNA_03272	0.63	-2.1
3,442,108	-		CCNA_03272	0.63	-1.0
3,442,144	-		CCNA_03272	0.65	-0.2