Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01194

Experiment: PYE with copper (II) chloride 0.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with copper (II) chloride 0.25 mM
1,314,564	+		CCNA_01193	0.60	-0.1
1,314,564	+		CCNA_01193	0.60	+0.2
1,314,567	-		CCNA_01193	0.60	+1.6
1,314,572	-		CCNA_01193	0.61	+2.4
1,314,572	-		CCNA_01193	0.61	+1.1
1,314,572	-		CCNA_01193	0.61	+2.0
1,314,572	-		CCNA_01193	0.61	+2.3
1,314,572	-		CCNA_01193	0.61	+0.8
1,314,572	-		CCNA_01193	0.61	+1.5
1,314,584	+		CCNA_01193	0.61	-1.0
1,314,584	+		CCNA_01193	0.61	-1.0
1,314,584	+		CCNA_01193	0.61	+0.8
1,314,592	-		CCNA_01193	0.62	+1.3
1,314,592	-		CCNA_01193	0.62	+1.4
1,314,594	+		CCNA_01193	0.62	-1.0
1,314,602	-		CCNA_01193	0.62	+1.8
1,314,602	-		CCNA_01193	0.62	+0.8
1,314,602	-		CCNA_01193	0.62	+2.1
1,314,603	-		CCNA_01193	0.62	+1.3
1,314,631	+		CCNA_01193	0.64	+0.6
1,314,634	-		CCNA_01193	0.64	+1.9
1,314,634	-		CCNA_01193	0.64	+2.4
1,314,747	+		CCNA_01193	0.70	-0.0
1,314,747	+		CCNA_01193	0.70	+1.0
1,314,755	-		CCNA_01193	0.71	+1.5
1,314,757	+		CCNA_01193	0.71	-0.2
1,314,757	+		CCNA_01193	0.71	+1.0
1,314,765	-		CCNA_01193	0.71	+1.1
1,314,791	+		CCNA_01193	0.73	-0.4
1,314,806	+		CCNA_01193	0.74	-0.1
1,314,809	-		CCNA_01193	0.74	+1.4
1,314,809	-		CCNA_01193	0.74	+1.0
1,314,821	+		CCNA_01193	0.74	-0.6
1,314,848	-		CCNA_01193	0.76	+1.3
1,314,849	-		CCNA_01193	0.76	+3.8
1,314,947	+		CCNA_01193	0.81	+0.9
1,314,965	-		CCNA_01193	0.82	+2.2
1,314,979	-		CCNA_01193	0.83	+2.4
1,314,981	+		CCNA_01193	0.83	-0.9
1,315,035	+		CCNA_01193	0.86	-1.3
1,315,043	-		CCNA_01193	0.87	+1.5
1,315,043	-		CCNA_01193	0.87	+0.9
1,315,043	-		CCNA_01193	0.87	+1.0
1,315,049	+		CCNA_01193	0.87	-0.8
1,315,086	-		CCNA_01193	0.89	+1.9
1,315,124	+				+0.0
1,315,129	+				+0.2
1,315,186	+				+1.6
1,315,186	+				-0.4
1,315,186	+				-1.3
1,315,186	-				+1.7
1,315,194	-				+1.4
1,315,194	-				+1.3
1,315,194	-				+1.1
1,315,194	-				+4.8
1,315,224	-				+0.3
1,315,239	+				+0.7
1,315,307	+				-0.4
1,315,307	+				-2.2
1,315,335	+				-0.4
1,315,343	-				+0.9
1,315,589	-				+0.9
1,315,590	+				-1.5
1,315,597	+				-0.4
1,315,729	+				+0.6
1,315,729	+				-1.7
1,315,729	+				-0.6
1,315,734	+				-1.5
1,315,737	-				+1.3
1,315,737	-				+2.0
1,315,737	-				+3.4
1,315,742	-				+0.5
1,315,758	+		CCNA_01194	0.11	+0.3
1,315,760	+		CCNA_01194	0.11	-1.3
1,315,762	-		CCNA_01194	0.11	+0.4
1,315,786	+		CCNA_01194	0.12	+0.6
1,315,799	-		CCNA_01194	0.12	+1.4
1,315,877	-		CCNA_01194	0.15	+0.5
1,315,885	+		CCNA_01194	0.16	+0.9
1,315,891	-		CCNA_01194	0.16	+0.7
1,315,948	+		CCNA_01194	0.18	+0.0
1,315,955	-		CCNA_01194	0.19	+1.0
1,315,956	-		CCNA_01194	0.19	+0.9
1,315,984	-		CCNA_01194	0.20	-1.3
1,316,011	-		CCNA_01194	0.21	-0.2
1,316,039	+		CCNA_01194	0.22	-1.2
1,316,060	+		CCNA_01194	0.23	-0.2
1,316,071	+		CCNA_01194	0.23	+0.1
1,316,079	-		CCNA_01194	0.24	+0.4
1,316,112	-		CCNA_01194	0.25	-0.2
1,316,114	-		CCNA_01194	0.25	+0.3
1,316,125	+		CCNA_01194	0.25	-0.2
1,316,155	+		CCNA_01194	0.27	-1.7
1,316,184	+		CCNA_01194	0.28	+1.6
1,316,192	-		CCNA_01194	0.28	+0.9
1,316,239	+		CCNA_01194	0.30	+1.0
1,316,239	+		CCNA_01194	0.30	+0.4
1,316,239	+		CCNA_01194	0.30	-1.7
1,316,247	-		CCNA_01194	0.30	+0.8
1,316,444	-		CCNA_01194	0.38	+1.3
1,316,482	+		CCNA_01194	0.40	-0.0
1,316,482	+		CCNA_01194	0.40	+1.6
1,316,482	+		CCNA_01194	0.40	-1.8
1,316,490	-		CCNA_01194	0.40	-0.2
1,316,502	-		CCNA_01194	0.41	-0.0
1,316,502	-		CCNA_01194	0.41	-0.5
1,316,515	-		CCNA_01194	0.41	+1.8
1,316,517	+		CCNA_01194	0.41	-1.4
1,316,517	+		CCNA_01194	0.41	+0.7
1,316,525	-		CCNA_01194	0.42	+1.8
1,316,532	+		CCNA_01194	0.42	-0.7
1,316,535	-		CCNA_01194	0.42	+2.7
1,316,553	+		CCNA_01194	0.43	-1.5
1,316,553	+		CCNA_01194	0.43	+0.3
1,316,556	-		CCNA_01194	0.43	-0.5
1,316,561	-		CCNA_01194	0.43	+1.3
1,316,561	-		CCNA_01194	0.43	+1.1
1,316,561	-		CCNA_01194	0.43	+1.2
1,316,561	-		CCNA_01194	0.43	+0.7
1,316,561	-		CCNA_01194	0.43	+1.1
1,316,561	-		CCNA_01194	0.43	+0.0
1,316,561	-		CCNA_01194	0.43	+0.5
1,316,561	-		CCNA_01194	0.43	+3.2
1,316,561	-				+3.3
1,316,561	-		CCNA_01194	0.43	+0.7
1,316,639	-		CCNA_01194	0.46	+0.5
1,316,642	+		CCNA_01194	0.47	+0.3
1,316,642	+		CCNA_01194	0.47	+0.5
1,316,642	+		CCNA_01194	0.47	-0.9
1,316,650	-		CCNA_01194	0.47	+3.1
1,316,655	-		CCNA_01194	0.47	+0.1
1,316,672	+		CCNA_01194	0.48	+1.3
1,316,692	-		CCNA_01194	0.49	+1.7
1,316,702	+		CCNA_01194	0.49	-1.3
1,316,702	+		CCNA_01194	0.49	+0.8
1,316,710	-		CCNA_01194	0.49	+1.0
1,316,713	+		CCNA_01194	0.49	-1.4
1,316,736	+		CCNA_01194	0.50	-1.1
1,316,773	-		CCNA_01194	0.52	+0.7
1,316,788	-		CCNA_01194	0.52	-0.1
1,316,790	+		CCNA_01194	0.53	-1.3
1,316,835	+		CCNA_01194	0.54	+0.5
1,316,835	+		CCNA_01194	0.54	-1.0
1,316,835	+		CCNA_01194	0.54	+1.3
1,316,835	+		CCNA_01194	0.54	-0.1
1,316,840	+		CCNA_01194	0.55	-1.0
1,316,843	-		CCNA_01194	0.55	+0.5
1,316,843	-		CCNA_01194	0.55	+0.2
1,316,848	-		CCNA_01194	0.55	+1.6
1,316,848	-		CCNA_01194	0.55	+1.3
1,316,848	-		CCNA_01194	0.55	+0.4
1,316,848	-		CCNA_01194	0.55	+0.8
1,316,874	+		CCNA_01194	0.56	-0.6
1,316,874	+		CCNA_01194	0.56	+0.6
1,316,874	+		CCNA_01194	0.56	+0.1
1,316,874	+		CCNA_01194	0.56	-1.1
1,316,881	+		CCNA_01194	0.56	-0.9
1,316,882	-		CCNA_01194	0.56	+0.3
1,316,889	+		CCNA_01194	0.57	+0.4
1,316,889	-		CCNA_01194	0.57	+1.0
1,316,889	-		CCNA_01194	0.57	+0.3
1,316,944	-		CCNA_01194	0.59	+1.2
1,316,976	-		CCNA_01194	0.60	+2.2
1,317,009	-		CCNA_01194	0.61	-0.1
1,317,077	+		CCNA_01194	0.64	+1.1
1,317,183	-		CCNA_01194	0.69	+0.5
1,317,218	+		CCNA_01194	0.70	-0.4
1,317,219	+		CCNA_01194	0.70	+1.3
1,317,227	-		CCNA_01194	0.70	+0.4
1,317,253	+		CCNA_01194	0.71	-0.0
1,317,253	+		CCNA_01194	0.71	-1.2
1,317,256	-		CCNA_01194	0.72	+0.3
1,317,279	+		CCNA_01194	0.72	-0.2
1,317,280	+		CCNA_01194	0.73	-0.7
1,317,349	-		CCNA_01194	0.75	+1.2
1,317,356	-		CCNA_01194	0.76	-0.2
1,317,372	+		CCNA_01194	0.76	-0.1
1,317,380	-		CCNA_01194	0.77	+0.7
1,317,400	+		CCNA_01194	0.77	+0.6
1,317,400	+		CCNA_01194	0.77	+1.0
1,317,401	-		CCNA_01194	0.77	-0.2
1,317,408	-		CCNA_01194	0.78	-0.5
1,317,408	-		CCNA_01194	0.78	+0.3
1,317,408	-		CCNA_01194	0.78	+0.7
1,317,423	+		CCNA_01194	0.78	+2.7
1,317,424	+		CCNA_01194	0.78	-0.4
1,317,486	+		CCNA_01194	0.81	-0.6
1,317,494	-		CCNA_01194	0.81	-0.5
1,317,536	-		CCNA_01194	0.83	+0.6
1,317,553	-		CCNA_01194	0.84	+0.4
1,317,582	+		CCNA_01194	0.85	-0.6
1,317,644	-		CCNA_01194	0.87	+0.6
1,317,694	-		CCNA_01194	0.89	+0.3
1,317,756	-				+1.8
1,317,771	-				-0.2
1,317,791	+				-0.5
1,317,833	-				+2.1
1,317,906	+				-1.2
1,317,914	-				+2.6
1,318,001	-				-0.5
1,318,055	-				-0.4
1,318,096	+				+1.9
1,318,100	+				-1.1
1,318,100	+				-1.4
1,318,121	-				+0.8
1,318,126	-				+0.3
1,318,153	-				-0.8
1,318,228	-		CCNA_01195	0.12	-0.2
1,318,233	-		CCNA_01195	0.13	-1.2
1,318,233	-		CCNA_01195	0.13	+1.6
1,318,233	-		CCNA_01195	0.13	-1.0
1,318,233	-		CCNA_01195	0.13	-0.7
1,318,233	-		CCNA_01195	0.13	-0.3
1,318,248	-		CCNA_01195	0.14	-0.3
1,318,248	-		CCNA_01195	0.14	-1.0
1,318,346	+		CCNA_01195	0.24	+0.3
1,318,346	+		CCNA_01195	0.24	-1.6
1,318,346	+		CCNA_01195	0.24	-1.1
1,318,346	+		CCNA_01195	0.24	-0.5
1,318,346	+		CCNA_01195	0.24	-2.0
1,318,346	+		CCNA_01195	0.24	-1.4
1,318,346	+		CCNA_01195	0.24	+0.5
1,318,346	+		CCNA_01195	0.24	-0.4
1,318,346	+		CCNA_01195	0.24	-0.4
1,318,346	+		CCNA_01195	0.24	-0.0
1,318,347	-		CCNA_01195	0.24	+0.6
1,318,349	-		CCNA_01195	0.24	+2.0
1,318,354	-		CCNA_01195	0.24	-0.9
1,318,354	-		CCNA_01195	0.24	-0.6
1,318,354	-		CCNA_01195	0.24	+0.4
1,318,354	-		CCNA_01195	0.24	-2.1
1,318,354	-		CCNA_01195	0.24	+0.8
1,318,354	-		CCNA_01195	0.24	-2.0
1,318,376	-		CCNA_01195	0.27	-1.2
1,318,423	+		CCNA_01195	0.31	+2.0
1,318,431	-		CCNA_01195	0.32	+0.3
1,318,431	-		CCNA_01195	0.32	-0.9
1,318,441	+		CCNA_01195	0.33	-0.4
1,318,446	+		CCNA_01195	0.33	+2.3
1,318,448	+		CCNA_01195	0.34	-1.2
1,318,449	-		CCNA_01195	0.34	-0.7
1,318,456	-		CCNA_01195	0.34	+0.8
1,318,456	-		CCNA_01195	0.34	-1.6
1,318,469	-		CCNA_01195	0.36	+0.0
1,318,479	-		CCNA_01195	0.37	-1.1
1,318,495	-		CCNA_01195	0.38	+0.1
1,318,496	-		CCNA_01195	0.38	-0.2
1,318,496	-		CCNA_01195	0.38	-0.4
1,318,508	+		CCNA_01195	0.39	-1.4
1,318,516	-		CCNA_01195	0.40	+2.3
1,318,533	+		CCNA_01195	0.42	+0.8
1,318,694	-		CCNA_01195	0.58	+0.5
1,318,719	+		CCNA_01195	0.60	-0.4
1,318,722	+		CCNA_01195	0.60	+0.3
1,318,788	-		CCNA_01195	0.67	+1.0
1,318,794	-		CCNA_01195	0.67	+0.8
1,318,802	+		CCNA_01195	0.68	-0.5
1,318,802	+		CCNA_01195	0.68	+0.6
1,318,802	+		CCNA_01195	0.68	-1.4
1,318,810	-		CCNA_01195	0.69	-0.6
1,318,875	-				+3.0
1,318,875	-		CCNA_01195	0.75	-0.5
1,318,877	+		CCNA_01195	0.75	-0.9
1,318,946	-		CCNA_01195	0.82	+0.5