Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01053

Experiment: PYE with copper (II) chloride 0.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with copper (II) chloride 0.25 mM
1,151,221	-				-2.1
1,151,272	+				+0.5
1,151,272	+				+0.2
1,151,272	+				+0.7
1,151,272	+				-0.0
1,151,272	+				+1.3
1,151,272	+				-0.2
1,151,280	-				-0.6
1,151,280	-				-0.4
1,151,280	-				+0.4
1,151,280	-				-0.1
1,151,280	-				-1.5
1,151,280	-				-2.4
1,151,280	-				+0.9
1,151,285	-				-1.5
1,151,352	+				-0.1
1,151,352	+				-0.6
1,151,352	+				+2.0
1,151,360	-				-0.6
1,151,375	-				+0.4
1,151,375	-				+1.1
1,151,377	+				-0.4
1,151,420	+				+0.4
1,151,420	+				-0.0
1,151,548	-				+1.1
1,151,559	-				-0.5
1,151,559	-				-0.6
1,151,638	+		CCNA_01052	0.12	+0.9
1,151,638	+		CCNA_01052	0.12	-1.1
1,151,646	-		CCNA_01052	0.13	-0.1
1,151,700	-		CCNA_01052	0.20	-0.7
1,151,849	-		CCNA_01052	0.41	-0.1
1,151,921	-		CCNA_01052	0.51	-0.4
1,151,926	+		CCNA_01052	0.51	+0.6
1,151,926	+		CCNA_01052	0.51	-0.4
1,151,975	+		CCNA_01052	0.58	+1.4
1,151,975	+		CCNA_01052	0.58	-1.5
1,152,001	+		CCNA_01052	0.62	+0.1
1,152,003	-		CCNA_01052	0.62	-1.8
1,152,009	-		CCNA_01052	0.63	+0.2
1,152,040	-		CCNA_01052	0.67	-2.4
1,152,042	+		CCNA_01052	0.67	-0.8
1,152,042	+		CCNA_01052	0.67	-0.9
1,152,051	+		CCNA_01052	0.69	-0.5
1,152,068	-		CCNA_01052	0.71	-0.2
1,152,075	-		CCNA_01052	0.72	-0.7
1,152,095	+		CCNA_01052	0.75	-1.8
1,152,112	+		CCNA_01052	0.77	-1.1
1,152,185	-		CCNA_01052	0.87	-1.6
1,152,185	-		CCNA_01052	0.87	+2.0
1,152,219	+				-0.2
1,152,240	-				+0.0
1,152,265	+				-0.5
1,152,273	-				-0.9
1,152,335	+		CCNA_01053	0.12	-0.1
1,152,361	+		CCNA_01053	0.14	-0.8
1,152,361	+		CCNA_01053	0.14	-0.8
1,152,371	+		CCNA_01053	0.15	+0.1
1,152,371	+		CCNA_01053	0.15	-0.0
1,152,371	+		CCNA_01053	0.15	-1.6
1,152,391	-		CCNA_01053	0.17	-0.1
1,152,392	-		CCNA_01053	0.17	+3.4
1,152,419	-		CCNA_01053	0.20	+0.6
1,152,422	+		CCNA_01053	0.20	+0.1
1,152,430	-		CCNA_01053	0.21	-0.4
1,152,471	+		CCNA_01053	0.24	-0.1
1,152,479	-		CCNA_01053	0.25	-0.8
1,152,520	+		CCNA_01053	0.29	-1.7
1,152,533	-		CCNA_01053	0.30	-0.4
1,152,534	+		CCNA_01053	0.30	-0.7
1,152,542	+		CCNA_01053	0.31	-1.3
1,152,542	+		CCNA_01053	0.31	-1.1
1,152,550	-		CCNA_01053	0.32	-0.5
1,152,550	-		CCNA_01053	0.32	-0.8
1,152,584	+		CCNA_01053	0.35	-1.0
1,152,593	+		CCNA_01053	0.35	-1.3
1,152,601	-		CCNA_01053	0.36	-2.1
1,152,602	-		CCNA_01053	0.36	-0.7
1,152,691	+		CCNA_01053	0.44	+2.7
1,152,691	+		CCNA_01053	0.44	-0.4
1,152,699	-		CCNA_01053	0.45	-0.4
1,152,727	+		CCNA_01053	0.48	-1.4
1,152,770	-		CCNA_01053	0.51	+0.2
1,152,821	+		CCNA_01053	0.56	+0.2
1,152,829	-		CCNA_01053	0.57	+0.3
1,152,838	-		CCNA_01053	0.58	-0.7
1,152,845	+		CCNA_01053	0.58	-1.8
1,152,845	+		CCNA_01053	0.58	-2.1
1,152,845	+		CCNA_01053	0.58	-2.7
1,152,845	+		CCNA_01053	0.58	+1.1
1,152,845	+		CCNA_01053	0.58	-2.2
1,152,845	+		CCNA_01053	0.58	-0.1
1,152,845	+		CCNA_01053	0.58	-0.8
1,152,845	+		CCNA_01053	0.58	-2.7
1,152,845	+		CCNA_01053	0.58	+0.7
1,152,853	-		CCNA_01053	0.59	-0.7
1,152,853	-		CCNA_01053	0.59	-0.3
1,152,853	-		CCNA_01053	0.59	-1.6
1,152,853	-		CCNA_01053	0.59	-2.5
1,152,853	-		CCNA_01053	0.59	-2.5
1,152,853	-		CCNA_01053	0.59	+0.2
1,152,945	+		CCNA_01053	0.67	-1.3
1,152,945	+		CCNA_01053	0.67	+0.6
1,152,945	+		CCNA_01053	0.67	-0.5
1,152,945	+		CCNA_01053	0.67	+0.4
1,152,945	+		CCNA_01053	0.67	-1.0
1,152,950	+		CCNA_01053	0.68	-2.0
1,152,953	-		CCNA_01053	0.68	-1.1
1,152,953	-		CCNA_01053	0.68	-0.0
1,152,953	-		CCNA_01053	0.68	-0.9
1,152,953	-		CCNA_01053	0.68	+0.6
1,152,953	-		CCNA_01053	0.68	-1.5
1,152,963	-		CCNA_01053	0.69	-2.4
1,152,963	-		CCNA_01053	0.69	-0.5
1,152,970	+		CCNA_01053	0.69	-0.5
1,152,978	-		CCNA_01053	0.70	-1.0
1,153,034	-		CCNA_01053	0.75	-0.4
1,153,034	-		CCNA_01053	0.75	-1.4
1,153,036	+		CCNA_01053	0.75	+1.2
1,153,109	+		CCNA_01053	0.82	+0.9
1,153,124	-		CCNA_01053	0.83	-0.8
1,153,154	+		CCNA_01053	0.86	+0.1
1,153,168	+		CCNA_01053	0.87	+0.2
1,153,183	+		CCNA_01053	0.89	-1.8
1,153,190	-		CCNA_01053	0.89	-1.3
1,153,256	+				+0.0
1,153,269	-				-0.4
1,153,320	-				-1.3
1,153,320	-				+0.4
1,153,363	-				-0.8
1,153,408	-				-1.4
1,153,431	+				+0.3
1,153,431	+				-0.5
1,153,431	+				-0.1
1,153,439	-				-1.6
1,153,445	-				-0.4
1,153,445	-				-1.4
1,153,446	+				+1.4
1,153,455	-				-0.8
1,153,470	+				-0.6
1,153,470	+				-0.1
1,153,470	+				-0.3
1,153,556	-		CCNA_01054	0.15	-1.6
1,153,567	+		CCNA_01054	0.16	-0.4
1,153,567	-		CCNA_01054	0.16	-1.4
1,153,578	-		CCNA_01054	0.16	-1.3
1,153,693	-		CCNA_01054	0.24	-0.0
1,153,727	-		CCNA_01054	0.26	+0.4
1,153,758	-		CCNA_01054	0.28	+0.6
1,153,760	+		CCNA_01054	0.29	-0.5
1,153,768	-		CCNA_01054	0.29	-1.1
1,153,780	-		CCNA_01054	0.30	-0.1
1,153,782	+		CCNA_01054	0.30	+1.3
1,153,962	+		CCNA_01054	0.42	+2.0
1,153,967	+		CCNA_01054	0.42	+1.4
1,153,969	+		CCNA_01054	0.43	-0.3
1,153,969	+		CCNA_01054	0.43	-0.9
1,153,969	+		CCNA_01054	0.43	-1.4
1,153,976	-		CCNA_01054	0.43	-0.0
1,153,977	-		CCNA_01054	0.43	-0.0
1,153,977	-		CCNA_01054	0.43	+1.1
1,153,977	-		CCNA_01054	0.43	-0.4
1,153,977	-		CCNA_01054	0.43	-0.8
1,154,023	-		CCNA_01054	0.46	-0.6
1,154,043	-		CCNA_01054	0.47	+2.0
1,154,054	+		CCNA_01054	0.48	-0.7
1,154,054	+		CCNA_01054	0.48	-0.8
1,154,054	+		CCNA_01054	0.48	-0.3
1,154,054	+		CCNA_01054	0.48	+0.4
1,154,054	+		CCNA_01054	0.48	-0.6
1,154,054	+		CCNA_01054	0.48	-1.0
1,154,062	-		CCNA_01054	0.49	+0.4
1,154,062	-		CCNA_01054	0.49	-0.2
1,154,062	-		CCNA_01054	0.49	-2.3
1,154,081	-		CCNA_01054	0.50	-1.4
1,154,084	+		CCNA_01054	0.50	-2.1
1,154,085	+		CCNA_01054	0.50	-0.6
1,154,092	-		CCNA_01054	0.51	-0.8
1,154,133	+		CCNA_01054	0.53	+2.0
1,154,133	+		CCNA_01054	0.53	-2.4
1,154,239	-		CCNA_01054	0.61	-2.0
1,154,269	-		CCNA_01054	0.63	-0.2
1,154,288	-		CCNA_01054	0.64	+1.4
1,154,304	+		CCNA_01054	0.65	+0.1
1,154,304	+		CCNA_01054	0.65	-1.0