Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08695 and AZOBR_RS08700 are separated by 55 nucleotides AZOBR_RS08700 and AZOBR_RS08705 are separated by 16 nucleotides AZOBR_RS08705 and AZOBR_RS08710 are separated by 128 nucleotides AZOBR_RS08710 and AZOBR_RS08715 are separated by 88 nucleotides
AZOBR_RS08695: AZOBR_RS08695 - 3-mercaptopyruvate sulfurtransferase, at 1,819,790 to 1,820,653
_RS08695
AZOBR_RS08700: AZOBR_RS08700 - Ala-tRNA(Pro) hydrolase, at 1,820,709 to 1,821,416
_RS08700
AZOBR_RS08705: AZOBR_RS08705 - cysteine synthase, at 1,821,433 to 1,822,437
_RS08705
AZOBR_RS08710: AZOBR_RS08710 - ADP-ribose pyrophosphatase, at 1,822,566 to 1,823,174
_RS08710
AZOBR_RS08715: AZOBR_RS08715 - serine protease, at 1,823,263 to 1,824,150
_RS08715
Position (kb)
1821
1822
1823 Strain fitness (log2 ratio)
-1
0
1 at 1820.674 kb on + strand at 1820.675 kb on - strand at 1820.675 kb on - strand at 1820.675 kb on - strand at 1820.675 kb on - strand at 1820.675 kb on - strand at 1820.675 kb on - strand at 1821.316 kb on + strand, within AZOBR_RS08700 at 1821.779 kb on + strand, within AZOBR_RS08705 at 1821.779 kb on + strand, within AZOBR_RS08705 at 1821.779 kb on + strand, within AZOBR_RS08705 at 1821.780 kb on - strand, within AZOBR_RS08705 at 1822.058 kb on + strand, within AZOBR_RS08705 at 1822.058 kb on + strand, within AZOBR_RS08705 at 1822.058 kb on + strand, within AZOBR_RS08705 at 1822.058 kb on + strand, within AZOBR_RS08705 at 1822.058 kb on + strand, within AZOBR_RS08705 at 1822.058 kb on + strand, within AZOBR_RS08705 at 1822.059 kb on - strand, within AZOBR_RS08705 at 1822.059 kb on - strand, within AZOBR_RS08705 at 1822.059 kb on - strand, within AZOBR_RS08705 at 1822.059 kb on - strand, within AZOBR_RS08705 at 1822.059 kb on - strand, within AZOBR_RS08705 at 1822.059 kb on - strand, within AZOBR_RS08705 at 1822.059 kb on - strand, within AZOBR_RS08705 at 1822.059 kb on - strand, within AZOBR_RS08705 at 1822.059 kb on - strand, within AZOBR_RS08705 at 1822.059 kb on - strand, within AZOBR_RS08705 at 1822.059 kb on - strand, within AZOBR_RS08705 at 1822.228 kb on - strand, within AZOBR_RS08705 at 1822.476 kb on + strand at 1822.567 kb on + strand at 1822.792 kb on + strand, within AZOBR_RS08710 at 1822.793 kb on - strand, within AZOBR_RS08710 at 1822.793 kb on - strand, within AZOBR_RS08710 at 1822.814 kb on - strand, within AZOBR_RS08710 at 1823.009 kb on - strand, within AZOBR_RS08710 at 1823.105 kb on - strand, within AZOBR_RS08710 at 1823.219 kb on + strand at 1823.219 kb on + strand at 1823.294 kb on + strand at 1823.295 kb on - strand at 1823.396 kb on + strand, within AZOBR_RS08715
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 1,820,674 + +0.7 1,820,675 - +0.2 1,820,675 - -0.8 1,820,675 - -0.5 1,820,675 - -0.4 1,820,675 - -0.0 1,820,675 - +0.4 1,821,316 + AZOBR_RS08700 0.86 -0.2 1,821,779 + AZOBR_RS08705 0.34 +0.2 1,821,779 + AZOBR_RS08705 0.34 -0.7 1,821,779 + AZOBR_RS08705 0.34 +0.5 1,821,780 - AZOBR_RS08705 0.35 -0.3 1,822,058 + AZOBR_RS08705 0.62 -0.3 1,822,058 + AZOBR_RS08705 0.62 -1.3 1,822,058 + AZOBR_RS08705 0.62 +0.0 1,822,058 + AZOBR_RS08705 0.62 -0.0 1,822,058 + AZOBR_RS08705 0.62 +0.3 1,822,058 + AZOBR_RS08705 0.62 -0.1 1,822,059 - AZOBR_RS08705 0.62 +0.3 1,822,059 - AZOBR_RS08705 0.62 +0.3 1,822,059 - AZOBR_RS08705 0.62 -0.7 1,822,059 - AZOBR_RS08705 0.62 +0.4 1,822,059 - AZOBR_RS08705 0.62 -0.4 1,822,059 - AZOBR_RS08705 0.62 +0.2 1,822,059 - AZOBR_RS08705 0.62 -1.1 1,822,059 - AZOBR_RS08705 0.62 -1.1 1,822,059 - AZOBR_RS08705 0.62 -0.6 1,822,059 - AZOBR_RS08705 0.62 -0.5 1,822,059 - AZOBR_RS08705 0.62 +0.0 1,822,228 - AZOBR_RS08705 0.79 -0.8 1,822,476 + -0.1 1,822,567 + +0.5 1,822,792 + AZOBR_RS08710 0.37 +0.3 1,822,793 - AZOBR_RS08710 0.37 -0.7 1,822,793 - AZOBR_RS08710 0.37 -0.3 1,822,814 - AZOBR_RS08710 0.41 +0.6 1,823,009 - AZOBR_RS08710 0.73 +0.4 1,823,105 - AZOBR_RS08710 0.89 +0.4 1,823,219 + +0.9 1,823,219 + +0.8 1,823,294 + -0.3 1,823,295 - -0.0 1,823,396 + AZOBR_RS08715 0.15 -1.2
Or see this region's nucleotide sequence