Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28425

Experiment: Spectinomycin 0.15 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.15 mg/ml
6,193,018	+		AO353_28420	0.16	-1.3
6,193,018	+		AO353_28420	0.16	+0.4
6,193,018	+		AO353_28420	0.16	+0.6
6,193,018	+		AO353_28420	0.16	-0.3
6,193,024	+		AO353_28420	0.17	-0.5
6,193,024	+		AO353_28420	0.17	+0.9
6,193,025	-		AO353_28420	0.17	+0.3
6,193,025	-		AO353_28420	0.17	+0.0
6,193,025	-		AO353_28420	0.17	-0.7
6,193,385	+		AO353_28420	0.59	-0.8
6,193,385	+		AO353_28420	0.59	+1.7
6,193,386	-		AO353_28420	0.60	+0.3
6,193,484	+		AO353_28420	0.71	+0.6
6,193,484	+		AO353_28420	0.71	+0.9
6,193,484	+		AO353_28420	0.71	-0.4
6,193,485	-		AO353_28420	0.71	+1.5
6,193,485	-		AO353_28420	0.71	+0.0
6,193,504	+		AO353_28420	0.73	+0.8
6,193,504	+		AO353_28420	0.73	-0.4
6,193,504	+		AO353_28420	0.73	-0.5
6,193,504	+		AO353_28420	0.73	-0.7
6,193,504	+		AO353_28420	0.73	+0.3
6,193,504	+		AO353_28420	0.73	-0.1
6,193,505	-		AO353_28420	0.74	-0.9
6,193,505	-		AO353_28420	0.74	-1.8
6,193,514	+		AO353_28420	0.75	+0.1
6,193,515	-		AO353_28420	0.75	+1.2
6,193,547	+		AO353_28420	0.79	+0.1
6,193,548	-		AO353_28420	0.79	-0.5
6,193,548	-		AO353_28420	0.79	+0.6
6,193,619	-		AO353_28420	0.87	+0.3
6,193,619	-		AO353_28420	0.87	+0.2
6,193,619	-		AO353_28420	0.87	-1.4
6,193,619	-				+1.3
6,193,681	+				+0.8
6,193,681	+				+0.3
6,193,681	+				-1.0
6,193,681	+				+0.4
6,193,681	+				-0.1
6,193,682	-				-0.5
6,193,682	-				+0.0
6,193,682	-				-0.3
6,193,693	+				-1.1
6,193,693	+				-0.7
6,193,693	+				-1.2
6,193,693	+				+0.5
6,193,693	+				-0.2
6,193,693	+				+0.3
6,193,694	-				+0.1
6,193,694	-				+0.1
6,193,694	-				-2.4
6,193,694	-				-0.7
6,193,694	-				+0.9
6,193,694	-				-0.5
6,193,694	-				+0.3
6,193,695	+				+0.0
6,193,695	+				+0.2
6,193,695	+				-0.3
6,193,695	+				+0.7
6,193,696	-				-0.2
6,193,696	-				+0.6
6,193,753	+				-1.0
6,193,753	+				+0.9
6,193,754	-				+0.2
6,193,754	-				+1.6
6,193,754	-				-1.1
6,193,754	-				-1.8
6,193,754	-				-1.0
6,193,754	-				+0.3
6,193,777	-				-0.2
6,193,777	-				-0.3
6,193,855	+				-1.7
6,193,856	-				-0.7
6,193,856	-				-2.1
6,193,856	-				+1.6
6,193,856	-				+0.2
6,193,856	-				-1.3
6,194,060	-		AO353_28425	0.19	-1.0
6,194,139	+		AO353_28425	0.32	+0.3
6,194,140	-		AO353_28425	0.32	-1.0
6,194,283	+		AO353_28425	0.56	+0.3
6,194,283	+		AO353_28425	0.56	+0.2
6,194,284	-		AO353_28425	0.56	+0.3
6,194,284	-		AO353_28425	0.56	-2.0
6,194,394	+		AO353_28425	0.75	-1.3
6,194,394	+		AO353_28425	0.75	-1.2
6,194,395	-		AO353_28425	0.75	+0.3
6,194,395	-		AO353_28425	0.75	-0.5
6,194,543	+				-1.3
6,194,544	-				-0.3
6,194,544	-				+0.5
6,194,544	-				+1.3
6,194,544	-				+0.0
6,194,584	-				+0.3
6,194,705	+				+0.7
6,194,713	-				-1.3
6,194,814	+		AO353_28430	0.12	-0.9
6,194,814	+		AO353_28430	0.12	-0.1
6,194,814	+		AO353_28430	0.12	-1.0
6,194,814	+		AO353_28430	0.12	+0.1
6,194,814	+		AO353_28430	0.12	-1.0
6,194,814	+		AO353_28430	0.12	+0.2
6,194,815	-		AO353_28430	0.12	-0.4
6,194,815	-		AO353_28430	0.12	-0.3
6,194,815	-		AO353_28430	0.12	+0.8
6,194,815	-		AO353_28430	0.12	+0.3
6,194,815	-		AO353_28430	0.12	-0.1
6,194,815	-		AO353_28430	0.12	-0.7
6,194,815	-		AO353_28430	0.12	+0.3
6,194,815	-		AO353_28430	0.12	-0.7
6,194,815	-		AO353_28430	0.12	-0.5
6,194,815	-		AO353_28430	0.12	-1.1
6,194,817	+		AO353_28430	0.12	+0.3
6,194,817	+		AO353_28430	0.12	-1.5
6,194,818	-		AO353_28430	0.12	-0.5
6,194,818	-		AO353_28430	0.12	-1.5
6,194,818	-		AO353_28430	0.12	-1.4
6,194,907	+		AO353_28430	0.20	+0.4
6,194,908	-		AO353_28430	0.20	-1.5
6,194,923	+		AO353_28430	0.22	-0.3
6,194,923	+		AO353_28430	0.22	+0.2
6,194,923	+		AO353_28430	0.22	-1.0
6,194,924	-		AO353_28430	0.22	+1.3
6,194,924	-		AO353_28430	0.22	-1.0
6,194,924	-		AO353_28430	0.22	+0.6
6,194,924	-		AO353_28430	0.22	+0.8
6,194,924	-		AO353_28430	0.22	-1.3
6,194,924	-		AO353_28430	0.22	-1.1
6,194,924	-		AO353_28430	0.22	+0.9
6,195,072	-		AO353_28430	0.35	-0.3
6,195,076	+		AO353_28430	0.36	+1.1
6,195,076	+		AO353_28430	0.36	-1.2
6,195,076	+		AO353_28430	0.36	+1.3
6,195,077	-		AO353_28430	0.36	+0.1
6,195,136	+		AO353_28430	0.41	-0.7
6,195,225	+		AO353_28430	0.49	-1.7
6,195,225	+		AO353_28430	0.49	+0.3
6,195,225	+		AO353_28430	0.49	-0.4
6,195,226	-		AO353_28430	0.49	-2.0
6,195,430	-		AO353_28430	0.68	+0.8
6,195,430	-		AO353_28430	0.68	-0.4
6,195,466	-		AO353_28430	0.71	+0.0
6,195,466	-		AO353_28430	0.71	+0.1