Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15555

Experiment: Spectinomycin 0.15 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.15 mg/ml
3,442,097	+		AO353_15550	0.30	+0.4
3,442,097	+		AO353_15550	0.30	+1.2
3,442,097	+		AO353_15550	0.30	-0.1
3,442,097	+		AO353_15550	0.30	-1.5
3,442,097	+		AO353_15550	0.30	-0.0
3,442,097	+		AO353_15550	0.30	-1.9
3,442,097	+		AO353_15550	0.30	+1.1
3,442,097	+		AO353_15550	0.30	-0.7
3,442,097	+		AO353_15550	0.30	+0.2
3,442,097	+		AO353_15550	0.30	-0.3
3,442,097	+		AO353_15550	0.30	-0.5
3,442,097	+		AO353_15550	0.30	+0.8
3,442,098	-		AO353_15550	0.30	-0.5
3,442,098	-		AO353_15550	0.30	-0.0
3,442,098	-		AO353_15550	0.30	-0.1
3,442,098	-		AO353_15550	0.30	+0.1
3,442,101	+		AO353_15550	0.30	+0.3
3,442,101	+		AO353_15550	0.30	+0.9
3,442,101	+		AO353_15550	0.30	+1.2
3,442,101	+		AO353_15550	0.30	-0.9
3,442,101	+		AO353_15550	0.30	+0.0
3,442,101	+		AO353_15550	0.30	-0.6
3,442,101	+		AO353_15550	0.30	-0.3
3,442,102	-		AO353_15550	0.30	-1.7
3,442,102	-		AO353_15550	0.30	+1.1
3,442,107	+		AO353_15550	0.31	+1.0
3,442,401	+		AO353_15550	0.53	+2.1
3,442,401	+		AO353_15550	0.53	+0.4
3,442,402	-		AO353_15550	0.53	-0.6
3,442,506	-		AO353_15550	0.61	+1.3
3,442,506	-		AO353_15550	0.61	-1.5
3,442,508	+		AO353_15550	0.62	+0.2
3,442,508	+		AO353_15550	0.62	-1.9
3,442,508	+		AO353_15550	0.62	-0.1
3,442,508	+		AO353_15550	0.62	-0.9
3,442,508	+		AO353_15550	0.62	-0.0
3,442,508	+		AO353_15550	0.62	-1.7
3,442,508	+		AO353_15550	0.62	-0.7
3,442,509	-		AO353_15550	0.62	-0.9
3,442,509	-		AO353_15550	0.62	+0.1
3,442,509	-		AO353_15550	0.62	-0.3
3,442,509	-		AO353_15550	0.62	+0.9
3,442,509	-		AO353_15550	0.62	-1.0
3,442,509	-				-0.1
3,442,509	-		AO353_15550	0.62	-0.7
3,442,509	-		AO353_15550	0.62	-1.0
3,442,509	-		AO353_15550	0.62	-0.8
3,442,518	+		AO353_15550	0.62	+0.9
3,442,519	-		AO353_15550	0.62	+0.2
3,442,519	-		AO353_15550	0.62	-1.3
3,442,524	+		AO353_15550	0.63	-1.3
3,442,524	+		AO353_15550	0.63	-0.4
3,442,524	+		AO353_15550	0.63	-0.3
3,442,524	+		AO353_15550	0.63	-0.5
3,442,524	+		AO353_15550	0.63	+0.9
3,442,524	+		AO353_15550	0.63	+0.6
3,442,525	-		AO353_15550	0.63	+0.1
3,442,525	-		AO353_15550	0.63	+2.4
3,442,525	-		AO353_15550	0.63	+1.0
3,442,525	-		AO353_15550	0.63	+0.6
3,442,547	+		AO353_15550	0.65	+1.1
3,442,548	-		AO353_15550	0.65	-1.3
3,442,548	-		AO353_15550	0.65	-0.7
3,442,548	-		AO353_15550	0.65	-0.4
3,442,548	-		AO353_15550	0.65	+1.5
3,442,743	+		AO353_15550	0.80	-0.1
3,442,743	+		AO353_15550	0.80	-1.0
3,442,743	+		AO353_15550	0.80	+2.2
3,442,744	-		AO353_15550	0.80	+0.7
3,442,744	-		AO353_15550	0.80	+0.6
3,442,744	-		AO353_15550	0.80	+0.7
3,442,956	+				-1.3
3,442,956	+				-1.1
3,442,956	+				-0.9
3,442,956	+				-1.8
3,442,956	+				-0.7
3,442,956	+				-0.3
3,442,956	+				+2.1
3,442,957	-				-0.5
3,442,957	-				+0.9
3,442,957	-				+1.9
3,442,957	-				-0.8
3,442,957	-				-0.0
3,443,007	+				-1.8
3,443,036	+				+1.1
3,443,037	-				+1.0
3,443,150	+		AO353_15555	0.10	+0.3
3,443,406	+		AO353_15555	0.30	-0.5
3,443,407	-		AO353_15555	0.30	+0.3
3,443,418	+		AO353_15555	0.31	-0.1
3,443,418	+		AO353_15555	0.31	-0.7
3,443,487	+		AO353_15555	0.36	-0.7
3,443,489	+		AO353_15555	0.36	-0.9
3,443,490	-		AO353_15555	0.37	+0.3
3,443,490	-		AO353_15555	0.37	-1.5
3,443,490	-		AO353_15555	0.37	-1.6
3,443,490	-		AO353_15555	0.37	-0.9
3,443,490	-		AO353_15555	0.37	-0.1
3,443,494	-		AO353_15555	0.37	-0.0
3,443,494	-		AO353_15555	0.37	-0.1
3,443,494	-		AO353_15555	0.37	-1.3
3,443,494	-		AO353_15555	0.37	-0.1
3,443,625	+		AO353_15555	0.47	-0.9
3,443,626	-				+1.9
3,443,626	-		AO353_15555	0.47	+2.4
3,444,024	+		AO353_15555	0.77	-0.7
3,444,024	+		AO353_15555	0.77	+1.3
3,444,025	-		AO353_15555	0.78	-0.5
3,444,025	-		AO353_15555	0.78	-0.7
3,444,025	-		AO353_15555	0.78	-0.1
3,444,025	-		AO353_15555	0.78	-0.5
3,444,030	+		AO353_15555	0.78	+0.3
3,444,171	-		AO353_15555	0.89	-0.5
3,444,341	+				+0.7
3,444,342	-				-0.1
3,444,342	-				+0.0
3,444,342	-				-0.6
3,444,345	+				-0.9
3,444,345	+				+0.4
3,444,345	+				-0.5
3,444,345	+				-0.1
3,444,345	+				-0.9
3,444,345	+				+1.1
3,444,345	+				+1.0
3,444,345	+				-0.5
3,444,345	+				+1.9
3,444,345	+				+0.4
3,444,346	-				-0.9
3,444,346	-				+0.3
3,444,346	-				+2.3
3,444,346	-				+0.3
3,444,346	-				+0.4
3,444,346	-				-0.5
3,444,346	-				-0.5
3,444,348	+				-0.7
3,444,348	+				-0.7
3,444,349	-				-0.9
3,444,349	-				-0.3
3,444,349	-				+1.4
3,444,405	+		AO353_15560	0.12	-0.6
3,444,406	-		AO353_15560	0.12	-1.4
3,444,465	+		AO353_15560	0.21	+0.3
3,444,466	-		AO353_15560	0.21	+0.1
3,444,552	+		AO353_15560	0.35	+1.7
3,444,741	-		AO353_15560	0.65	+0.9
3,444,741	-		AO353_15560	0.65	+0.1
3,444,741	-		AO353_15560	0.65	-0.3
3,444,822	+		AO353_15560	0.77	-2.2
3,444,822	+		AO353_15560	0.77	-1.1
3,444,823	-		AO353_15560	0.78	+1.4
3,444,823	-		AO353_15560	0.78	-0.1
3,444,840	+		AO353_15560	0.80	+0.6
3,444,840	+		AO353_15560	0.80	+0.3
3,444,877	-		AO353_15560	0.86	+1.6
3,444,963	+				+0.4
3,444,963	+				-0.2
3,444,964	-				+1.4
3,444,964	-				+1.9
3,444,964	-				-0.0
3,445,042	+				-0.1
3,445,042	+				+0.6
3,445,042	+				-0.2
3,445,042	+				-1.1
3,445,042	+				-0.3
3,445,042	+				+0.7
3,445,043	-				-2.4
3,445,043	-				-1.3
3,445,043	-				-0.0
3,445,043	-				-1.7
3,445,142	+				+0.9
3,445,143	-				+0.3
3,445,143	-				+0.4
3,445,158	+				+0.4
3,445,159	-				-0.0
3,445,274	+		AO353_15565	0.17	-0.5
3,445,274	+		AO353_15565	0.17	-0.0
3,445,274	+		AO353_15565	0.17	+0.5
3,445,275	-		AO353_15565	0.17	-0.7
3,445,275	-		AO353_15565	0.17	+0.8
3,445,295	+		AO353_15565	0.19	+0.3
3,445,295	+		AO353_15565	0.19	+1.4
3,445,296	-		AO353_15565	0.19	-0.0