Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15485

Experiment: Spectinomycin 0.15 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.15 mg/ml
3,421,168	+				-0.9
3,421,169	-				-0.0
3,421,198	+				-0.9
3,421,198	+				-1.0
3,421,199	-				-0.7
3,421,199	-				-1.8
3,421,199	-				-0.5
3,421,199	-				-0.1
3,421,299	+		AO353_15480	0.27	-0.9
3,421,299	+		AO353_15480	0.27	+1.9
3,421,299	+		AO353_15480	0.27	+0.9
3,421,317	+		AO353_15480	0.34	+0.1
3,421,317	+		AO353_15480	0.34	-0.5
3,421,530	+				+1.5
3,421,530	+				+1.3
3,421,530	+				-1.1
3,421,530	+				+0.8
3,421,530	+				+0.8
3,421,530	+				-0.1
3,421,531	-				+0.9
3,421,531	-				+1.9
3,421,531	-				+2.2
3,421,531	-				+0.9
3,421,531	-				+1.9
3,421,564	+				+1.6
3,421,565	-				+0.3
3,421,565	-				+0.4
3,421,565	-				-0.1
3,421,565	-				+0.0
3,421,565	-				-1.5
3,421,565	-				-0.1
3,421,565	-				-1.8
3,421,565	-				+0.4
3,421,565	-				-0.3
3,421,644	+				-1.2
3,421,652	+				+1.2
3,421,653	-				+0.7
3,421,662	+				-0.1
3,421,662	+				+1.4
3,421,663	-				+0.9
3,421,663	-				+0.1
3,421,692	+				+0.3
3,421,692	+				+0.6
3,421,692	+				+1.5
3,421,693	-				+0.3
3,421,697	+				+1.7
3,421,698	-				-1.6
3,421,776	+				+1.0
3,421,902	+				+1.0
3,421,902	+				+0.5
3,421,902	+				+0.9
3,421,902	+				+0.5
3,421,902	+				-0.1
3,421,902	+				-1.3
3,421,902	+				-0.7
3,421,903	-				+1.6
3,421,903	-				-0.3
3,421,903	-				-0.0
3,421,903	-				-0.3
3,421,903	-				+0.4
3,421,903	-				-0.3
3,421,903	-				+0.3
3,421,903	-				-0.5
3,421,903	-				-0.9
3,421,903	-				-0.5
3,421,909	-				+2.3
3,421,934	+				-0.5
3,421,934	+				+0.8
3,421,934	+				+1.3
3,421,934	+				-0.3
3,421,934	+				+1.3
3,421,934	+				+1.0
3,421,934	+				-0.1
3,421,934	+				+0.6
3,421,934	+				+2.4
3,421,935	-				-1.0
3,421,935	-				-0.7
3,421,935	-				+1.3
3,421,935	-				+1.1
3,421,935	-				+0.6
3,421,935	-				+0.3
3,421,935	-				-0.5
3,421,935	-				-0.7
3,421,935	-				-0.3
3,421,935	-				-0.5
3,421,935	-				-0.6
3,421,935	-				-0.9
3,421,990	+				+0.9
3,421,990	+				-0.1
3,421,990	+				+0.7
3,421,991	-				-0.9
3,421,991	-				-0.2
3,421,991	-				-1.0
3,421,991	-				+0.5
3,421,991	-				-0.9
3,422,029	+				+1.1
3,422,029	+				-0.1
3,422,029	+				+1.3
3,422,029	+				+1.5
3,422,029	+				+0.2
3,422,030	-				-0.7
3,422,030	-				-0.5
3,422,030	-				-0.5
3,422,030	-				-0.9
3,422,030	-				-1.3
3,422,030	-				-2.4
3,422,030	-				+0.3
3,422,030	-				-1.1
3,422,030	-				-0.6
3,422,049	+				-2.7
3,422,049	+				-0.5
3,422,050	-				+0.9
3,422,132	-		AO353_15485	0.18	-0.1
3,422,132	-		AO353_15485	0.18	+1.1
3,422,245	+		AO353_15485	0.40	+0.7
3,422,245	+		AO353_15485	0.40	-0.9
3,422,246	-		AO353_15485	0.40	-2.0
3,422,246	-		AO353_15485	0.40	-1.6
3,422,275	+		AO353_15485	0.46	-3.3
3,422,276	-		AO353_15485	0.46	-0.2
3,422,276	-		AO353_15485	0.46	-0.7
3,422,276	-		AO353_15485	0.46	-0.5
3,422,276	-		AO353_15485	0.46	-2.6
3,422,276	-		AO353_15485	0.46	+0.3
3,422,314	+		AO353_15485	0.54	-1.1
3,422,314	+		AO353_15485	0.54	+0.1
3,422,314	+		AO353_15485	0.54	-0.7
3,422,314	+		AO353_15485	0.54	-1.7
3,422,314	+		AO353_15485	0.54	-3.5
3,422,315	-		AO353_15485	0.54	-0.1
3,422,315	-		AO353_15485	0.54	-0.5
3,422,393	-		AO353_15485	0.70	-2.9
3,422,393	-		AO353_15485	0.70	+0.9
3,422,393	-		AO353_15485	0.70	-0.3
3,422,393	-		AO353_15485	0.70	-0.7
3,422,393	-		AO353_15485	0.70	+0.6
3,422,443	+		AO353_15485	0.80	-0.6
3,422,443	+		AO353_15485	0.80	-0.9
3,422,443	+		AO353_15485	0.80	-2.8
3,422,444	-		AO353_15485	0.80	-1.1
3,422,542	+				+1.1
3,422,542	+				+1.5
3,422,543	-				+0.3
3,422,812	+		AO353_15490	0.85	-0.2
3,422,813	-		AO353_15490	0.86	+0.5
3,422,813	-		AO353_15490	0.86	-0.7
3,422,859	-				+0.6
3,423,021	+				+0.4
3,423,032	+				-0.9
3,423,033	-				+0.9
3,423,094	+				-0.8
3,423,094	+				+0.5
3,423,094	+				-1.3
3,423,094	+				-0.5
3,423,095	-				-0.9
3,423,095	-				+1.6
3,423,095	-				-0.9
3,423,095	-				-0.8
3,423,095	-				-0.6
3,423,095	-				+0.2
3,423,095	-				-1.6
3,423,160	+				-1.0
3,423,161	-				+0.7
3,423,193	+				-0.3
3,423,193	+				+0.2
3,423,193	+				+0.4
3,423,193	+				-0.2
3,423,193	+				-1.1
3,423,193	+				+0.3
3,423,194	-				-0.8
3,423,210	+		AO353_15495	0.10	-0.5
3,423,210	+		AO353_15495	0.10	-0.0
3,423,210	+		AO353_15495	0.10	-0.3
3,423,211	-		AO353_15495	0.10	-1.3
3,423,211	-		AO353_15495	0.10	+0.5
3,423,406	+		AO353_15495	0.25	-1.1
3,423,406	+		AO353_15495	0.25	+1.3
3,423,406	+		AO353_15495	0.25	-0.9
3,423,407	-		AO353_15495	0.25	-0.7
3,423,407	-		AO353_15495	0.25	-0.2
3,423,407	-		AO353_15495	0.25	-0.7
3,423,461	-		AO353_15495	0.29	+0.5
3,423,496	+		AO353_15495	0.32	+0.2