Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15040

Experiment: Spectinomycin 0.15 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.15 mg/ml
3,327,644	+		AO353_15035	0.50	+0.1
3,327,644	+		AO353_15035	0.50	-0.3
3,327,644	+		AO353_15035	0.50	+1.9
3,327,644	+		AO353_15035	0.50	-0.8
3,327,644	+		AO353_15035	0.50	-1.2
3,327,645	-		AO353_15035	0.50	+0.1
3,327,645	-		AO353_15035	0.50	+1.2
3,327,645	-		AO353_15035	0.50	+0.6
3,327,645	-		AO353_15035	0.50	+0.7
3,327,645	-		AO353_15035	0.50	+1.9
3,327,645	-		AO353_15035	0.50	-1.2
3,327,656	+		AO353_15035	0.51	-0.8
3,327,656	+		AO353_15035	0.51	+1.0
3,327,656	+		AO353_15035	0.51	-1.3
3,327,685	-		AO353_15035	0.53	-0.0
3,328,173	-		AO353_15035	0.85	-1.4
3,328,173	-		AO353_15035	0.85	-0.4
3,328,173	-		AO353_15035	0.85	-1.1
3,328,173	-		AO353_15035	0.85	+0.1
3,328,281	+				-1.1
3,328,281	+				-0.3
3,328,281	+				-0.3
3,328,281	+				-0.8
3,328,281	+				-0.4
3,328,282	-				-1.4
3,328,282	-				+0.6
3,328,282	-				-0.7
3,328,352	+				+0.6
3,328,352	+				-0.7
3,328,352	+				+0.2
3,328,353	-				-1.1
3,328,353	-				+0.5
3,328,353	-				-0.2
3,328,353	-				+0.7
3,328,353	-				-1.4
3,328,353	-				+0.4
3,328,353	-				+0.7
3,328,353	-				-0.6
3,328,353	-				+0.1
3,328,353	-				-1.4
3,328,353	-				-1.1
3,328,394	+				-0.9
3,328,394	+				-0.1
3,328,395	-				-0.8
3,328,395	-				-0.2
3,328,440	+				-0.1
3,328,441	-				-0.9
3,328,665	+		AO353_15040	0.18	-1.3
3,328,665	+		AO353_15040	0.18	-0.4
3,328,665	+		AO353_15040	0.18	+1.4
3,328,665	+		AO353_15040	0.18	+0.2
3,328,665	+		AO353_15040	0.18	-0.6
3,328,665	+		AO353_15040	0.18	+1.0
3,328,665	+		AO353_15040	0.18	-1.0
3,328,666	-		AO353_15040	0.18	+0.7
3,328,666	-		AO353_15040	0.18	-1.4
3,328,666	-		AO353_15040	0.18	+1.2
3,328,666	-		AO353_15040	0.18	-1.2
3,328,666	-		AO353_15040	0.18	-0.2
3,328,666	-		AO353_15040	0.18	+1.0
3,328,666	-		AO353_15040	0.18	-0.2
3,328,666	-		AO353_15040	0.18	-1.6
3,328,666	-		AO353_15040	0.18	+1.9
3,328,666	-		AO353_15040	0.18	-0.7
3,328,666	-		AO353_15040	0.18	+0.5
3,328,743	+		AO353_15040	0.24	-0.2
3,328,744	-		AO353_15040	0.24	+0.0
3,328,744	-		AO353_15040	0.24	+0.9
3,328,744	-		AO353_15040	0.24	+0.1
3,328,758	+		AO353_15040	0.25	+0.9
3,328,758	+		AO353_15040	0.25	-1.3
3,328,758	+		AO353_15040	0.25	-0.7
3,328,759	-		AO353_15040	0.25	+1.5
3,328,805	-		AO353_15040	0.29	-0.3
3,328,805	-		AO353_15040	0.29	-0.1
3,328,968	+		AO353_15040	0.40	+0.7
3,328,969	-		AO353_15040	0.41	+1.2
3,328,969	-		AO353_15040	0.41	+1.1
3,328,969	-		AO353_15040	0.41	+0.0
3,329,130	+		AO353_15040	0.52	+1.6
3,329,130	+		AO353_15040	0.52	+0.7
3,329,130	+		AO353_15040	0.52	+0.1
3,329,163	+		AO353_15040	0.55	-1.7
3,329,163	+		AO353_15040	0.55	+0.3
3,329,163	+		AO353_15040	0.55	-0.6
3,329,163	+		AO353_15040	0.55	-0.0
3,329,163	+		AO353_15040	0.55	-0.2
3,329,164	-		AO353_15040	0.55	-0.9
3,329,164	-		AO353_15040	0.55	+1.2
3,329,289	+		AO353_15040	0.64	+1.1
3,329,289	+		AO353_15040	0.64	-0.0
3,329,289	+		AO353_15040	0.64	+0.7
3,329,289	+		AO353_15040	0.64	+0.7
3,329,290	-		AO353_15040	0.64	-1.1
3,329,290	-		AO353_15040	0.64	-0.4
3,329,290	-		AO353_15040	0.64	+1.1
3,329,290	-		AO353_15040	0.64	+0.1
3,329,290	-		AO353_15040	0.64	+0.9
3,329,291	+		AO353_15040	0.64	-0.3
3,329,291	+		AO353_15040	0.64	-0.9
3,329,291	+		AO353_15040	0.64	+0.5
3,329,291	+		AO353_15040	0.64	-0.5
3,329,292	-		AO353_15040	0.64	+0.7
3,329,292	-		AO353_15040	0.64	+0.7
3,329,292	-		AO353_15040	0.64	-1.3
3,329,356	+		AO353_15040	0.69	-0.0
3,329,376	+		AO353_15040	0.70	+0.5
3,329,376	+		AO353_15040	0.70	-1.5
3,329,475	+		AO353_15040	0.77	-1.8
3,329,628	-		AO353_15040	0.89	+1.2
3,329,756	+				+0.3
3,329,757	-				-0.1
3,329,757	-				-1.3
3,329,769	+				-0.3
3,329,841	+				+0.8
3,329,841	+				-1.1
3,329,878	+				-0.1
3,329,879	-				-0.1
3,329,879	-				-1.7
3,329,879	-				-0.2
3,329,904	+				+0.7
3,329,904	+				+0.9
3,329,904	+				-0.9
3,329,904	+				+0.6
3,329,904	+				+1.0
3,329,904	+				+0.1
3,329,904	+				+0.2
3,329,904	+				-1.6
3,329,904	+				-1.7
3,329,904	+				-0.4
3,329,904	+				+1.3
3,329,904	+				-0.3
3,329,904	+				+0.4
3,329,905	-				-0.7
3,329,905	-				+0.2
3,329,905	-				+0.7
3,329,905	-				-0.7
3,329,905	-				-0.4
3,329,905	-				-0.4
3,329,905	-				+0.4
3,329,905	-				+0.3
3,329,905	-				-0.4
3,329,918	+				+1.7
3,329,918	+				-0.6
3,329,918	+				-0.4
3,329,918	+				-0.5
3,329,919	-				-0.4
3,329,919	-				+0.9
3,330,014	+				-1.1
3,330,014	+				-1.6
3,330,014	+				+0.3
3,330,014	+				+0.6
3,330,014	+				-0.1
3,330,014	+				+2.1
3,330,014	+				-0.4
3,330,015	-				-3.0
3,330,015	-				-0.1
3,330,015	-				-0.1
3,330,015	-				-0.2
3,330,015	-				-0.1
3,330,015	-				-2.0
3,330,015	-				+1.6
3,330,030	+				+0.0
3,330,030	+				-0.9
3,330,110	+				-1.6
3,330,110	+				-0.1
3,330,110	+				-0.5
3,330,110	+				-1.5
3,330,111	-				-0.4
3,330,111	-				+0.1
3,330,155	+				+0.3
3,330,156	-				-0.0
3,330,156	-				-0.7
3,330,313	+		AO353_15045	0.13	+1.4
3,330,314	-		AO353_15045	0.13	-0.2
3,330,314	-		AO353_15045	0.13	-0.1
3,330,334	+		AO353_15045	0.16	+0.5
3,330,335	-		AO353_15045	0.16	+0.0
3,330,374	+		AO353_15045	0.20	-2.1
3,330,375	-		AO353_15045	0.20	+0.0
3,330,375	-		AO353_15045	0.20	-0.1
3,330,391	+		AO353_15045	0.21	+0.8
3,330,391	+		AO353_15045	0.21	-1.9
3,330,391	+		AO353_15045	0.21	+1.9
3,330,391	+		AO353_15045	0.21	-0.5
3,330,391	+		AO353_15045	0.21	-1.6
3,330,391	+		AO353_15045	0.21	-0.8
3,330,391	+		AO353_15045	0.21	+0.3
3,330,391	+		AO353_15045	0.21	+0.6
3,330,391	+		AO353_15045	0.21	-2.0
3,330,392	-		AO353_15045	0.21	-0.9
3,330,392	-		AO353_15045	0.21	+0.3
3,330,392	-		AO353_15045	0.21	-2.0
3,330,392	-		AO353_15045	0.21	-0.0
3,330,392	-		AO353_15045	0.21	+0.9
3,330,392	-		AO353_15045	0.21	-1.8
3,330,392	-		AO353_15045	0.21	+0.6
3,330,392	-		AO353_15045	0.21	-0.8
3,330,392	-		AO353_15045	0.21	-0.6
3,330,392	-		AO353_15045	0.21	-0.2
3,330,392	-		AO353_15045	0.21	-1.6
3,330,392	-		AO353_15045	0.21	+1.9
3,330,392	-		AO353_15045	0.21	+0.3
3,330,613	+		AO353_15045	0.44	+0.3
3,330,613	+		AO353_15045	0.44	+0.3
3,330,614	-		AO353_15045	0.44	+0.4
3,330,614	-		AO353_15045	0.44	+1.3
3,330,614	-		AO353_15045	0.44	-0.4