Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10780

Experiment: Spectinomycin 0.15 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.15 mg/ml
2,356,747	+		AO353_10775	0.52	-2.6
2,356,747	+		AO353_10775	0.52	-0.2
2,356,747	+		AO353_10775	0.52	+1.5
2,356,747	+		AO353_10775	0.52	-1.3
2,356,747	+		AO353_10775	0.52	-0.5
2,356,747	+		AO353_10775	0.52	-0.1
2,356,747	+		AO353_10775	0.52	-3.1
2,356,747	+		AO353_10775	0.52	-1.7
2,356,748	-		AO353_10775	0.52	-0.9
2,356,748	-		AO353_10775	0.52	+0.1
2,356,748	-		AO353_10775	0.52	-0.7
2,356,748	-		AO353_10775	0.52	+0.3
2,356,748	-		AO353_10775	0.52	+0.7
2,356,801	+		AO353_10775	0.55	+0.2
2,356,801	+		AO353_10775	0.55	+0.1
2,356,801	+		AO353_10775	0.55	-0.9
2,356,801	+		AO353_10775	0.55	-0.7
2,356,801	+		AO353_10775	0.55	+0.8
2,356,801	+		AO353_10775	0.55	-1.5
2,356,802	-		AO353_10775	0.55	-0.1
2,356,802	-		AO353_10775	0.55	-1.4
2,356,802	-		AO353_10775	0.55	-1.3
2,356,802	-		AO353_10775	0.55	+1.3
2,356,912	+		AO353_10775	0.60	-0.5
2,356,912	+		AO353_10775	0.60	-0.8
2,356,912	+		AO353_10775	0.60	-1.5
2,356,912	+		AO353_10775	0.60	-1.0
2,356,912	+		AO353_10775	0.60	+0.9
2,356,912	+		AO353_10775	0.60	+0.1
2,356,913	-		AO353_10775	0.60	-1.8
2,356,913	-		AO353_10775	0.60	-2.6
2,356,913	-		AO353_10775	0.60	+0.3
2,356,913	-		AO353_10775	0.60	-1.3
2,356,913	-		AO353_10775	0.60	-0.2
2,356,913	-		AO353_10775	0.60	-0.1
2,356,985	+		AO353_10775	0.64	-0.8
2,356,985	+		AO353_10775	0.64	-1.0
2,356,985	+		AO353_10775	0.64	-0.1
2,356,986	-		AO353_10775	0.64	+1.0
2,356,986	-		AO353_10775	0.64	+0.7
2,356,986	-		AO353_10775	0.64	+0.9
2,356,986	-		AO353_10775	0.64	-0.3
2,356,986	-		AO353_10775	0.64	-0.7
2,356,986	-		AO353_10775	0.64	-1.3
2,356,986	-		AO353_10775	0.64	-2.5
2,356,986	-		AO353_10775	0.64	-2.2
2,356,986	-		AO353_10775	0.64	-1.3
2,357,128	+		AO353_10775	0.71	-2.1
2,357,129	-		AO353_10775	0.71	-1.0
2,357,129	-		AO353_10775	0.71	+0.8
2,357,390	+		AO353_10775	0.84	-0.7
2,357,390	+		AO353_10775	0.84	-2.1
2,357,390	+		AO353_10775	0.84	-2.5
2,357,390	+		AO353_10775	0.84	-1.6
2,357,391	-		AO353_10775	0.84	+0.6
2,357,446	+		AO353_10775	0.86	-1.3
2,357,446	+		AO353_10775	0.86	-0.7
2,357,446	+		AO353_10775	0.86	-2.9
2,357,446	+		AO353_10775	0.86	+1.5
2,357,447	-		AO353_10775	0.86	-0.5
2,357,447	-		AO353_10775	0.86	-0.9
2,357,447	-		AO353_10775	0.86	-0.7
2,357,475	+		AO353_10775	0.88	+0.8
2,357,475	+		AO353_10775	0.88	-0.4
2,357,476	-		AO353_10775	0.88	-0.5
2,357,503	+		AO353_10775	0.89	-0.1
2,357,503	+		AO353_10775	0.89	-0.7
2,357,503	+		AO353_10775	0.89	+0.8
2,357,504	-		AO353_10775	0.89	+0.3
2,357,504	-		AO353_10775	0.89	-0.6
2,357,506	+		AO353_10775	0.89	-1.2
2,357,506	+		AO353_10775	0.89	-0.5
2,357,506	+		AO353_10775	0.89	-0.5
2,357,506	+				+0.3
2,357,506	+		AO353_10775	0.89	+0.8
2,357,506	+		AO353_10775	0.89	-1.1
2,357,506	+		AO353_10775	0.89	-2.3
2,357,506	+		AO353_10775	0.89	-2.2
2,357,506	+		AO353_10775	0.89	-1.2
2,357,506	+		AO353_10775	0.89	-0.3
2,357,506	+		AO353_10775	0.89	-2.2
2,357,506	+		AO353_10775	0.89	-2.8
2,357,506	+		AO353_10775	0.89	-0.1
2,357,506	+		AO353_10775	0.89	-1.3
2,357,506	+		AO353_10775	0.89	-0.4
2,357,506	+		AO353_10775	0.89	-1.5
2,357,506	+		AO353_10775	0.89	-1.5
2,357,506	+		AO353_10775	0.89	-1.0
2,357,507	-		AO353_10775	0.89	+0.7
2,357,507	-		AO353_10775	0.89	-2.1
2,357,507	-		AO353_10775	0.89	-0.1
2,357,507	-		AO353_10775	0.89	-1.1
2,357,507	-		AO353_10775	0.89	-1.7
2,357,507	-		AO353_10775	0.89	+0.3
2,357,507	-		AO353_10775	0.89	+0.1
2,357,507	-		AO353_10775	0.89	-0.3
2,357,512	+		AO353_10775	0.89	-0.1
2,357,512	+		AO353_10775	0.89	-0.1
2,357,512	+		AO353_10775	0.89	-0.1
2,357,512	+		AO353_10775	0.89	-0.1
2,357,512	+		AO353_10775	0.89	-0.2
2,357,512	+		AO353_10775	0.89	-1.7
2,357,512	+		AO353_10775	0.89	+0.5
2,357,512	+		AO353_10775	0.89	+0.3
2,357,512	+		AO353_10775	0.89	+0.5
2,357,512	+		AO353_10775	0.89	+2.8
2,357,512	+		AO353_10775	0.89	-1.4
2,357,512	+		AO353_10775	0.89	-0.2
2,357,512	+		AO353_10775	0.89	-0.5
2,357,513	-		AO353_10775	0.90	-1.7
2,357,513	-		AO353_10775	0.90	-2.9
2,357,513	-		AO353_10775	0.90	+0.3
2,357,513	-		AO353_10775	0.90	+0.9
2,357,513	-		AO353_10775	0.90	-0.5
2,357,513	-		AO353_10775	0.90	-0.4
2,357,513	-		AO353_10775	0.90	-1.2
2,357,513	-		AO353_10775	0.90	-1.3
2,357,921	+		AO353_10780	0.68	-0.5
2,357,921	+		AO353_10780	0.68	-0.2
2,357,922	-		AO353_10780	0.68	-1.8
2,357,922	-		AO353_10780	0.68	-0.7
2,358,064	+				+2.3
2,358,064	+				+0.9
2,358,065	-				+0.3
2,358,065	-				+0.0
2,358,065	-				-0.1
2,358,065	-				+0.6
2,358,068	+				+0.0
2,358,068	+				+0.7
2,358,069	-				+1.3
2,358,069	-				-1.6
2,358,069	-				-0.1
2,358,096	+				+0.8
2,358,096	+				+0.0
2,358,096	+				-0.3
2,358,096	+				+0.3
2,358,096	+				-0.5
2,358,096	+				+0.3
2,358,096	+				-0.1
2,358,096	+				-0.3
2,358,096	+				+1.1
2,358,096	+				-0.5
2,358,096	+				+1.7
2,358,096	+				-1.8
2,358,096	+				+0.7
2,358,096	+				+1.4
2,358,097	-				+2.5
2,358,097	-				+0.5
2,358,097	-				+1.5
2,358,097	-				+0.2
2,358,097	-				+1.0
2,358,097	-				-0.5
2,358,097	-				-0.7
2,358,097	-				-0.1
2,358,097	-				-0.2
2,358,097	-				-0.9
2,358,097	-				-1.5
2,358,097	-				+0.4
2,358,097	-				-0.7
2,358,097	-				+1.8
2,358,097	-				-0.9
2,358,097	-				-1.2
2,358,097	-				-0.8
2,358,097	-				-1.4
2,358,097	-				-0.9
2,358,097	-				-1.2
2,358,097	-				-0.1
2,358,097	-				-1.1
2,358,097	-				+0.9
2,358,283	-		AO353_10785	0.20	+0.7
2,358,283	-		AO353_10785	0.20	+0.8
2,358,368	+		AO353_10785	0.33	+1.5
2,358,368	+		AO353_10785	0.33	-0.2
2,358,368	+		AO353_10785	0.33	+2.3
2,358,368	+		AO353_10785	0.33	-2.2
2,358,368	+		AO353_10785	0.33	-1.0
2,358,368	+		AO353_10785	0.33	+0.4
2,358,369	-		AO353_10785	0.33	+0.2
2,358,369	-		AO353_10785	0.33	-1.9
2,358,369	-		AO353_10785	0.33	-0.3
2,358,369	-		AO353_10785	0.33	-0.2
2,358,369	-		AO353_10785	0.33	+0.5
2,358,369	-		AO353_10785	0.33	-1.2
2,358,382	-		AO353_10785	0.35	+0.1
2,358,382	-		AO353_10785	0.35	+1.6
2,358,461	+		AO353_10785	0.47	+1.3
2,358,461	+		AO353_10785	0.47	-0.5
2,358,461	+		AO353_10785	0.47	-0.6
2,358,461	+		AO353_10785	0.47	-0.1
2,358,461	+		AO353_10785	0.47	+1.0
2,358,462	-		AO353_10785	0.47	-1.1
2,358,513	+		AO353_10785	0.55	-0.5
2,358,513	+		AO353_10785	0.55	+0.3
2,358,514	-		AO353_10785	0.55	-1.3
2,358,514	-		AO353_10785	0.55	-0.7
2,358,514	-		AO353_10785	0.55	+1.2
2,358,514	-		AO353_10785	0.55	+0.1
2,358,514	-		AO353_10785	0.55	-1.1
2,358,648	+		AO353_10785	0.75	-0.7
2,358,649	-		AO353_10785	0.76	-0.3
2,358,669	+		AO353_10785	0.79	-0.1
2,358,669	+		AO353_10785	0.79	+0.4
2,358,679	-		AO353_10785	0.80	-0.8
2,358,758	+				-1.8
2,358,758	+				+1.1
2,358,758	+				-1.0
2,358,759	-				+0.2
2,358,759	-				-0.4
2,358,759	-				-0.2
2,358,759	-				-1.4
2,358,843	+				-0.7
2,358,843	+				-0.6
2,358,843	+				+0.3
2,358,843	+				-1.2
2,358,843	+				-0.6
2,358,843	+				-1.7
2,358,843	+				-0.6
2,358,843	+				+1.3
2,358,843	+				+0.2
2,358,843	+				+0.6
2,358,843	+				+1.6
2,358,844	-				+0.5
2,358,844	-				+0.4
2,358,844	-				-1.7
2,358,844	-				+0.3
2,358,844	-				-0.8
2,358,903	+				+0.4
2,358,923	+				-0.1
2,358,923	+				-0.6
2,358,923	+				+0.7
2,358,923	+				+0.3
2,358,924	-				+0.9
2,358,924	-				+1.2
2,358,924	-				+1.3
2,358,924	-				+0.6
2,358,924	-				+0.0
2,358,934	+				+0.0
2,358,934	+				+0.0
2,358,935	-				-0.3
2,358,935	-				-0.6
2,358,935	-				-1.1
2,358,935	-				-1.7
2,358,935	-				+0.4
2,358,935	-				+0.0
2,358,935	-				-0.6
2,358,935	-				+0.2
2,358,935	-				-1.1
2,358,949	-				+0.3
2,358,949	-				+0.9
2,358,969	+				+0.1
2,358,969	+				+1.0
2,358,969	+				+0.0
2,358,969	+				+0.2
2,358,969	+				-0.6
2,358,970	-				+0.7
2,358,970	-				-0.8
2,358,970	-				+1.2
2,358,970	-				+0.1
2,358,970	-				-0.1
2,358,970	-				+0.0
2,358,975	+				-0.7
2,358,976	-				-0.4
2,358,984	-				-0.0
2,359,009	+				+1.3
2,359,009	+				-1.5
2,359,009	+				-0.6
2,359,009	+				-0.9
2,359,009	+				+1.4
2,359,009	+				-0.1
2,359,010	-				+1.8
2,359,010	-				-0.8
2,359,010	-				+0.2
2,359,010	-				-0.1
2,359,010	-				+1.6