Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS20860 and ABZR86_RS20865 are separated by 181 nucleotides ABZR86_RS20865 and ABZR86_RS20870 are separated by 35 nucleotides
ABZR86_RS20860: ABZR86_RS20860 - transcriptional regulator GcvA, at 143,291 to 144,202
_RS20860
ABZR86_RS20865: ABZR86_RS20865 - SDR family oxidoreductase, at 144,384 to 145,157
_RS20865
ABZR86_RS20870: ABZR86_RS20870 - alcohol dehydrogenase catalytic domain-containing protein, at 145,193 to 146,230
_RS20870
Position (kb) 144
145
146 Strain fitness (log2 ratio) -1
0
1
2 at 143.502 kb on - strand, within ABZR86_RS20860 at 143.630 kb on + strand, within ABZR86_RS20860 at 143.701 kb on - strand, within ABZR86_RS20860 at 144.211 kb on - strand at 144.282 kb on + strand at 144.283 kb on - strand at 144.288 kb on + strand at 144.288 kb on + strand at 144.288 kb on + strand at 144.289 kb on - strand at 144.292 kb on + strand at 144.293 kb on - strand at 144.331 kb on - strand at 144.711 kb on + strand, within ABZR86_RS20865 at 144.711 kb on + strand, within ABZR86_RS20865 at 144.711 kb on + strand, within ABZR86_RS20865 at 144.712 kb on - strand, within ABZR86_RS20865 at 144.712 kb on - strand, within ABZR86_RS20865 at 144.712 kb on - strand, within ABZR86_RS20865 at 144.712 kb on - strand, within ABZR86_RS20865 at 144.852 kb on + strand, within ABZR86_RS20865 at 144.852 kb on + strand, within ABZR86_RS20865 at 144.921 kb on - strand, within ABZR86_RS20865 at 144.966 kb on + strand, within ABZR86_RS20865 at 144.966 kb on + strand, within ABZR86_RS20865 at 144.967 kb on - strand, within ABZR86_RS20865 at 144.967 kb on - strand, within ABZR86_RS20865 at 145.205 kb on + strand at 145.310 kb on - strand, within ABZR86_RS20870 at 145.749 kb on - strand, within ABZR86_RS20870 at 145.835 kb on + strand, within ABZR86_RS20870 at 145.835 kb on + strand, within ABZR86_RS20870 at 145.835 kb on + strand, within ABZR86_RS20870 at 145.835 kb on + strand, within ABZR86_RS20870 at 145.836 kb on - strand, within ABZR86_RS20870 at 146.156 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 143,502 - ABZR86_RS20860 0.23 -1.1 143,630 + ABZR86_RS20860 0.37 +1.4 143,701 - ABZR86_RS20860 0.45 +0.0 144,211 - -0.1 144,282 + +0.8 144,283 - -0.2 144,288 + +0.4 144,288 + -0.2 144,288 + +0.2 144,289 - -0.5 144,292 + -0.3 144,293 - +0.2 144,331 - -0.5 144,711 + ABZR86_RS20865 0.42 -0.3 144,711 + ABZR86_RS20865 0.42 -0.4 144,711 + ABZR86_RS20865 0.42 +0.5 144,712 - ABZR86_RS20865 0.42 -1.3 144,712 - ABZR86_RS20865 0.42 +0.9 144,712 - ABZR86_RS20865 0.42 +1.0 144,712 - ABZR86_RS20865 0.42 -0.2 144,852 + ABZR86_RS20865 0.60 +2.1 144,852 + ABZR86_RS20865 0.60 -0.8 144,921 - ABZR86_RS20865 0.69 -0.0 144,966 + ABZR86_RS20865 0.75 -0.2 144,966 + ABZR86_RS20865 0.75 -0.4 144,967 - ABZR86_RS20865 0.75 -0.4 144,967 - ABZR86_RS20865 0.75 +0.6 145,205 + +0.9 145,310 - ABZR86_RS20870 0.11 -0.1 145,749 - ABZR86_RS20870 0.54 -0.3 145,835 + ABZR86_RS20870 0.62 +0.8 145,835 + ABZR86_RS20870 0.62 +0.6 145,835 + ABZR86_RS20870 0.62 -0.6 145,835 + ABZR86_RS20870 0.62 +2.1 145,836 - ABZR86_RS20870 0.62 -0.9 146,156 + +0.5
Or see this region's nucleotide sequence