Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19960 and ABZR86_RS19965 are separated by 394 nucleotides ABZR86_RS19965 and ABZR86_RS19970 are separated by 72 nucleotides ABZR86_RS19970 and ABZR86_RS19975 are separated by 11 nucleotides ABZR86_RS19975 and ABZR86_RS19980 overlap by 4 nucleotides
ABZR86_RS19960: ABZR86_RS19960 - type II toxin-antitoxin system HicA family toxin, at 487,166 to 487,342
_RS19960
ABZR86_RS19965: ABZR86_RS19965 - tRNA-Phe, at 487,737 to 487,812
_RS19965
ABZR86_RS19970: ABZR86_RS19970 - oxidative damage protection protein, at 487,885 to 488,163
_RS19970
ABZR86_RS19975: ABZR86_RS19975 - A/G-specific adenine glycosylase, at 488,175 to 489,221
_RS19975
ABZR86_RS19980: ABZR86_RS19980 - AsmA family protein, at 489,218 to 490,303
_RS19980
Position (kb) 488
489
490 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 487.244 kb on - strand, within ABZR86_RS19960 at 487.267 kb on + strand, within ABZR86_RS19960 at 487.267 kb on + strand, within ABZR86_RS19960 at 487.267 kb on + strand, within ABZR86_RS19960 at 487.267 kb on + strand, within ABZR86_RS19960 at 487.267 kb on + strand, within ABZR86_RS19960 at 487.267 kb on + strand, within ABZR86_RS19960 at 487.268 kb on - strand, within ABZR86_RS19960 at 487.268 kb on - strand, within ABZR86_RS19960 at 487.268 kb on - strand, within ABZR86_RS19960 at 487.268 kb on - strand, within ABZR86_RS19960 at 487.268 kb on - strand, within ABZR86_RS19960 at 487.268 kb on - strand, within ABZR86_RS19960 at 487.268 kb on - strand, within ABZR86_RS19960 at 487.268 kb on - strand, within ABZR86_RS19960 at 487.268 kb on - strand, within ABZR86_RS19960 at 487.268 kb on - strand, within ABZR86_RS19960 at 487.401 kb on + strand at 487.455 kb on + strand at 487.455 kb on + strand at 487.455 kb on + strand at 487.455 kb on + strand at 487.455 kb on + strand at 487.455 kb on + strand at 487.455 kb on + strand at 487.455 kb on + strand at 487.455 kb on + strand at 487.456 kb on - strand at 487.456 kb on - strand at 487.456 kb on - strand at 487.456 kb on - strand at 487.456 kb on - strand at 487.456 kb on - strand at 487.456 kb on - strand at 487.625 kb on + strand at 487.625 kb on + strand at 487.713 kb on + strand at 487.713 kb on + strand at 487.714 kb on - strand at 487.910 kb on + strand at 487.910 kb on + strand at 487.910 kb on + strand at 487.910 kb on + strand at 487.910 kb on + strand at 487.911 kb on - strand at 487.911 kb on - strand at 487.911 kb on - strand at 487.911 kb on - strand at 487.911 kb on - strand at 488.006 kb on + strand, within ABZR86_RS19970 at 488.072 kb on + strand, within ABZR86_RS19970 at 488.072 kb on + strand, within ABZR86_RS19970 at 488.072 kb on + strand, within ABZR86_RS19970 at 488.073 kb on - strand, within ABZR86_RS19970 at 488.073 kb on - strand, within ABZR86_RS19970 at 488.177 kb on - strand at 488.556 kb on + strand, within ABZR86_RS19975 at 488.556 kb on + strand, within ABZR86_RS19975 at 488.675 kb on - strand, within ABZR86_RS19975 at 488.699 kb on + strand, within ABZR86_RS19975 at 488.699 kb on + strand, within ABZR86_RS19975 at 488.699 kb on + strand, within ABZR86_RS19975 at 488.700 kb on - strand, within ABZR86_RS19975 at 488.700 kb on - strand, within ABZR86_RS19975 at 488.700 kb on - strand, within ABZR86_RS19975 at 488.700 kb on - strand, within ABZR86_RS19975 at 488.700 kb on - strand, within ABZR86_RS19975 at 488.701 kb on + strand, within ABZR86_RS19975 at 488.701 kb on + strand, within ABZR86_RS19975 at 488.702 kb on - strand, within ABZR86_RS19975 at 488.702 kb on - strand, within ABZR86_RS19975 at 488.702 kb on - strand, within ABZR86_RS19975 at 488.702 kb on - strand, within ABZR86_RS19975 at 488.966 kb on - strand, within ABZR86_RS19975 at 488.966 kb on - strand, within ABZR86_RS19975 at 488.966 kb on - strand, within ABZR86_RS19975 at 488.968 kb on + strand, within ABZR86_RS19975 at 488.968 kb on + strand, within ABZR86_RS19975 at 488.968 kb on + strand, within ABZR86_RS19975 at 488.969 kb on - strand, within ABZR86_RS19975 at 488.969 kb on - strand, within ABZR86_RS19975 at 488.969 kb on - strand, within ABZR86_RS19975 at 489.062 kb on - strand, within ABZR86_RS19975 at 489.531 kb on + strand, within ABZR86_RS19980 at 489.531 kb on + strand, within ABZR86_RS19980 at 489.532 kb on - strand, within ABZR86_RS19980 at 489.532 kb on - strand, within ABZR86_RS19980 at 489.532 kb on - strand, within ABZR86_RS19980 at 489.845 kb on - strand, within ABZR86_RS19980 at 490.203 kb on + strand at 490.203 kb on + strand at 490.203 kb on + strand at 490.204 kb on - strand at 490.204 kb on - strand at 490.204 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 487,244 - ABZR86_RS19960 0.44 -0.2 487,267 + ABZR86_RS19960 0.57 -0.6 487,267 + ABZR86_RS19960 0.57 +0.1 487,267 + ABZR86_RS19960 0.57 +0.6 487,267 + ABZR86_RS19960 0.57 +0.4 487,267 + ABZR86_RS19960 0.57 +0.0 487,267 + ABZR86_RS19960 0.57 -0.3 487,268 - ABZR86_RS19960 0.58 +0.1 487,268 - ABZR86_RS19960 0.58 -0.3 487,268 - ABZR86_RS19960 0.58 +0.1 487,268 - ABZR86_RS19960 0.58 -0.3 487,268 - ABZR86_RS19960 0.58 +0.3 487,268 - ABZR86_RS19960 0.58 -2.6 487,268 - ABZR86_RS19960 0.58 +0.5 487,268 - ABZR86_RS19960 0.58 +0.2 487,268 - ABZR86_RS19960 0.58 +0.2 487,268 - ABZR86_RS19960 0.58 -0.1 487,401 + -0.9 487,455 + +0.3 487,455 + +0.4 487,455 + +0.6 487,455 + -0.4 487,455 + -0.6 487,455 + -0.4 487,455 + +0.7 487,455 + +0.6 487,455 + +0.1 487,456 - -0.1 487,456 - +0.2 487,456 - -0.4 487,456 - -3.4 487,456 - +2.2 487,456 - +0.7 487,456 - +0.2 487,625 + +1.0 487,625 + -0.3 487,713 + -0.4 487,713 + -0.6 487,714 - +1.8 487,910 + -0.2 487,910 + -3.5 487,910 + +0.7 487,910 + +0.4 487,910 + +1.2 487,911 - -0.2 487,911 - +0.2 487,911 - -0.8 487,911 - +1.0 487,911 - -0.2 488,006 + ABZR86_RS19970 0.43 -1.7 488,072 + ABZR86_RS19970 0.67 +1.3 488,072 + ABZR86_RS19970 0.67 -0.3 488,072 + ABZR86_RS19970 0.67 -0.4 488,073 - ABZR86_RS19970 0.67 +0.0 488,073 - ABZR86_RS19970 0.67 +0.2 488,177 - +0.3 488,556 + ABZR86_RS19975 0.36 +0.1 488,556 + ABZR86_RS19975 0.36 +0.6 488,675 - ABZR86_RS19975 0.48 +1.0 488,699 + ABZR86_RS19975 0.50 +0.3 488,699 + ABZR86_RS19975 0.50 +0.2 488,699 + ABZR86_RS19975 0.50 +0.7 488,700 - ABZR86_RS19975 0.50 -0.5 488,700 - ABZR86_RS19975 0.50 -0.5 488,700 - ABZR86_RS19975 0.50 -0.2 488,700 - ABZR86_RS19975 0.50 +0.7 488,700 - ABZR86_RS19975 0.50 -0.0 488,701 + ABZR86_RS19975 0.50 +0.2 488,701 + ABZR86_RS19975 0.50 -0.4 488,702 - ABZR86_RS19975 0.50 +1.3 488,702 - ABZR86_RS19975 0.50 -0.3 488,702 - ABZR86_RS19975 0.50 +0.5 488,702 - ABZR86_RS19975 0.50 +0.1 488,966 - ABZR86_RS19975 0.76 -0.2 488,966 - ABZR86_RS19975 0.76 +0.2 488,966 - ABZR86_RS19975 0.76 +0.9 488,968 + ABZR86_RS19975 0.76 +0.6 488,968 + ABZR86_RS19975 0.76 +0.8 488,968 + ABZR86_RS19975 0.76 -0.3 488,969 - ABZR86_RS19975 0.76 -1.3 488,969 - ABZR86_RS19975 0.76 +0.2 488,969 - ABZR86_RS19975 0.76 -1.0 489,062 - ABZR86_RS19975 0.85 +0.6 489,531 + ABZR86_RS19980 0.29 -0.9 489,531 + ABZR86_RS19980 0.29 +0.3 489,532 - ABZR86_RS19980 0.29 -0.6 489,532 - ABZR86_RS19980 0.29 +0.5 489,532 - ABZR86_RS19980 0.29 -1.5 489,845 - ABZR86_RS19980 0.58 -0.4 490,203 + +1.1 490,203 + -0.7 490,203 + -1.6 490,204 - -0.5 490,204 - -0.7 490,204 - +0.9
Or see this region's nucleotide sequence