Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18800 and ABZR86_RS18805 overlap by 1 nucleotides ABZR86_RS18805 and ABZR86_RS18810 are separated by 13 nucleotides ABZR86_RS18810 and ABZR86_RS18815 are separated by 360 nucleotides
ABZR86_RS18800: ABZR86_RS18800 - glycosyltransferase family 2 protein, at 188,463 to 189,455
_RS18800
ABZR86_RS18805: ABZR86_RS18805 - hypothetical protein, at 189,455 to 189,907
_RS18805
ABZR86_RS18810: ABZR86_RS18810 - methyltransferase domain-containing protein, at 189,921 to 190,841
_RS18810
ABZR86_RS18815: ABZR86_RS18815 - FAD-binding protein, at 191,202 to 192,146
_RS18815
Position (kb) 189
190
191 Strain fitness (log2 ratio) -1
0
1
2 at 189.046 kb on - strand, within ABZR86_RS18800 at 189.046 kb on - strand, within ABZR86_RS18800 at 189.046 kb on - strand, within ABZR86_RS18800 at 189.046 kb on - strand, within ABZR86_RS18800 at 189.046 kb on - strand, within ABZR86_RS18800 at 189.099 kb on + strand, within ABZR86_RS18800 at 189.099 kb on + strand, within ABZR86_RS18800 at 189.162 kb on - strand, within ABZR86_RS18800 at 189.162 kb on - strand, within ABZR86_RS18800 at 189.189 kb on + strand, within ABZR86_RS18800 at 189.189 kb on + strand, within ABZR86_RS18800 at 189.190 kb on - strand, within ABZR86_RS18800 at 189.190 kb on - strand, within ABZR86_RS18800 at 189.190 kb on - strand, within ABZR86_RS18800 at 189.390 kb on + strand at 189.390 kb on + strand at 189.390 kb on + strand at 189.391 kb on - strand at 189.391 kb on - strand at 189.391 kb on - strand at 189.427 kb on + strand at 189.427 kb on + strand at 189.428 kb on - strand at 189.428 kb on - strand at 189.551 kb on - strand, within ABZR86_RS18805 at 189.735 kb on - strand, within ABZR86_RS18805 at 189.838 kb on - strand, within ABZR86_RS18805 at 189.936 kb on + strand at 189.936 kb on + strand at 189.936 kb on + strand at 189.936 kb on + strand at 189.937 kb on - strand at 189.937 kb on - strand at 189.937 kb on - strand at 190.036 kb on + strand, within ABZR86_RS18810 at 190.037 kb on - strand, within ABZR86_RS18810 at 190.037 kb on - strand, within ABZR86_RS18810 at 190.037 kb on - strand, within ABZR86_RS18810 at 190.087 kb on + strand, within ABZR86_RS18810 at 190.087 kb on + strand, within ABZR86_RS18810 at 190.087 kb on + strand, within ABZR86_RS18810 at 190.087 kb on + strand, within ABZR86_RS18810 at 190.088 kb on - strand, within ABZR86_RS18810 at 190.088 kb on - strand, within ABZR86_RS18810 at 190.088 kb on - strand, within ABZR86_RS18810 at 190.088 kb on - strand, within ABZR86_RS18810 at 190.088 kb on - strand, within ABZR86_RS18810 at 190.219 kb on + strand, within ABZR86_RS18810 at 190.229 kb on + strand, within ABZR86_RS18810 at 190.256 kb on - strand, within ABZR86_RS18810 at 190.279 kb on + strand, within ABZR86_RS18810 at 190.279 kb on + strand, within ABZR86_RS18810 at 190.279 kb on + strand, within ABZR86_RS18810 at 190.280 kb on - strand, within ABZR86_RS18810 at 190.280 kb on - strand, within ABZR86_RS18810 at 190.280 kb on - strand, within ABZR86_RS18810 at 190.444 kb on + strand, within ABZR86_RS18810 at 190.445 kb on - strand, within ABZR86_RS18810 at 190.445 kb on - strand, within ABZR86_RS18810 at 190.543 kb on + strand, within ABZR86_RS18810 at 190.594 kb on + strand, within ABZR86_RS18810 at 190.594 kb on + strand, within ABZR86_RS18810 at 190.595 kb on - strand, within ABZR86_RS18810 at 190.595 kb on - strand, within ABZR86_RS18810 at 190.673 kb on - strand, within ABZR86_RS18810 at 190.684 kb on + strand, within ABZR86_RS18810 at 190.684 kb on + strand, within ABZR86_RS18810 at 190.723 kb on - strand, within ABZR86_RS18810 at 190.738 kb on + strand, within ABZR86_RS18810 at 190.738 kb on + strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.765 kb on + strand at 190.765 kb on + strand at 190.765 kb on + strand at 190.765 kb on + strand at 190.766 kb on - strand at 190.766 kb on - strand at 190.768 kb on + strand at 190.768 kb on + strand at 190.769 kb on - strand at 190.775 kb on - strand at 190.934 kb on + strand at 191.034 kb on + strand at 191.076 kb on + strand at 191.085 kb on - strand at 191.374 kb on + strand, within ABZR86_RS18815 at 191.374 kb on + strand, within ABZR86_RS18815 at 191.374 kb on + strand, within ABZR86_RS18815 at 191.375 kb on - strand, within ABZR86_RS18815 at 191.375 kb on - strand, within ABZR86_RS18815 at 191.375 kb on - strand, within ABZR86_RS18815 at 191.494 kb on + strand, within ABZR86_RS18815 at 191.495 kb on - strand, within ABZR86_RS18815
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 189,046 - ABZR86_RS18800 0.59 +0.8 189,046 - ABZR86_RS18800 0.59 -0.4 189,046 - ABZR86_RS18800 0.59 +0.6 189,046 - ABZR86_RS18800 0.59 -1.1 189,046 - ABZR86_RS18800 0.59 +1.1 189,099 + ABZR86_RS18800 0.64 -0.7 189,099 + ABZR86_RS18800 0.64 -0.5 189,162 - ABZR86_RS18800 0.70 +1.0 189,162 - ABZR86_RS18800 0.70 +0.7 189,189 + ABZR86_RS18800 0.73 -0.0 189,189 + ABZR86_RS18800 0.73 -0.0 189,190 - ABZR86_RS18800 0.73 +0.8 189,190 - ABZR86_RS18800 0.73 -0.8 189,190 - ABZR86_RS18800 0.73 +0.5 189,390 + -0.5 189,390 + -0.2 189,390 + +0.9 189,391 - -1.3 189,391 - +0.6 189,391 - -0.6 189,427 + +0.3 189,427 + -0.3 189,428 - -0.0 189,428 - -0.4 189,551 - ABZR86_RS18805 0.21 -0.6 189,735 - ABZR86_RS18805 0.62 -0.6 189,838 - ABZR86_RS18805 0.85 +1.1 189,936 + +0.3 189,936 + +1.0 189,936 + -0.0 189,936 + +1.3 189,937 - -0.2 189,937 - +0.4 189,937 - +0.4 190,036 + ABZR86_RS18810 0.12 -0.3 190,037 - ABZR86_RS18810 0.13 +0.3 190,037 - ABZR86_RS18810 0.13 +0.3 190,037 - ABZR86_RS18810 0.13 +0.1 190,087 + ABZR86_RS18810 0.18 -0.2 190,087 + ABZR86_RS18810 0.18 +0.5 190,087 + ABZR86_RS18810 0.18 -0.7 190,087 + ABZR86_RS18810 0.18 +0.7 190,088 - ABZR86_RS18810 0.18 -0.4 190,088 - ABZR86_RS18810 0.18 +0.7 190,088 - ABZR86_RS18810 0.18 +0.2 190,088 - ABZR86_RS18810 0.18 -0.2 190,088 - ABZR86_RS18810 0.18 -0.4 190,219 + ABZR86_RS18810 0.32 +0.3 190,229 + ABZR86_RS18810 0.33 +0.1 190,256 - ABZR86_RS18810 0.36 +0.4 190,279 + ABZR86_RS18810 0.39 +1.8 190,279 + ABZR86_RS18810 0.39 +0.1 190,279 + ABZR86_RS18810 0.39 +1.0 190,280 - ABZR86_RS18810 0.39 -0.7 190,280 - ABZR86_RS18810 0.39 +0.2 190,280 - ABZR86_RS18810 0.39 +0.1 190,444 + ABZR86_RS18810 0.57 -0.3 190,445 - ABZR86_RS18810 0.57 +0.1 190,445 - ABZR86_RS18810 0.57 +2.3 190,543 + ABZR86_RS18810 0.68 -0.6 190,594 + ABZR86_RS18810 0.73 -0.2 190,594 + ABZR86_RS18810 0.73 +0.3 190,595 - ABZR86_RS18810 0.73 +0.3 190,595 - ABZR86_RS18810 0.73 +0.0 190,673 - ABZR86_RS18810 0.82 +0.1 190,684 + ABZR86_RS18810 0.83 +0.2 190,684 + ABZR86_RS18810 0.83 +0.8 190,723 - ABZR86_RS18810 0.87 -0.5 190,738 + ABZR86_RS18810 0.89 -0.2 190,738 + ABZR86_RS18810 0.89 +0.5 190,739 - ABZR86_RS18810 0.89 -0.5 190,739 - ABZR86_RS18810 0.89 +1.4 190,739 - ABZR86_RS18810 0.89 +0.5 190,739 - ABZR86_RS18810 0.89 +0.2 190,739 - ABZR86_RS18810 0.89 +0.4 190,765 + +1.1 190,765 + -0.1 190,765 + +0.2 190,765 + +0.5 190,766 - +0.2 190,766 - +0.6 190,768 + +1.4 190,768 + +0.8 190,769 - +0.1 190,775 - -0.6 190,934 + +1.3 191,034 + -0.2 191,076 + +1.6 191,085 - +0.4 191,374 + ABZR86_RS18815 0.18 -1.1 191,374 + ABZR86_RS18815 0.18 +0.5 191,374 + ABZR86_RS18815 0.18 -0.9 191,375 - ABZR86_RS18815 0.18 +0.6 191,375 - ABZR86_RS18815 0.18 +0.0 191,375 - ABZR86_RS18815 0.18 -0.3 191,494 + ABZR86_RS18815 0.31 -1.1 191,495 - ABZR86_RS18815 0.31 -0.3
Or see this region's nucleotide sequence