Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS16875

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
3,807,373	+		ABZR86_RS16865	0.57	+0.6
3,807,373	+		ABZR86_RS16865	0.57	-1.3
3,807,373	+		ABZR86_RS16865	0.57	-0.1
3,807,374	-		ABZR86_RS16865	0.58	+0.0
3,807,374	-		ABZR86_RS16865	0.58	-0.7
3,807,374	-		ABZR86_RS16865	0.58	-0.4
3,807,382	+		ABZR86_RS16865	0.60	-0.3
3,807,382	+		ABZR86_RS16865	0.60	-0.3
3,807,382	+		ABZR86_RS16865	0.60	-0.1
3,807,382	+		ABZR86_RS16865	0.60	+0.1
3,807,383	-		ABZR86_RS16865	0.60	-0.0
3,807,383	-		ABZR86_RS16865	0.60	+0.0
3,807,433	+		ABZR86_RS16865	0.75	-0.1
3,808,126	-				-0.1
3,808,126	-				-0.2
3,808,126	-				-0.2
3,808,149	-				-0.9
3,808,277	+		ABZR86_RS16875	0.14	+0.2
3,808,281	-		ABZR86_RS16875	0.14	-0.6
3,808,281	-		ABZR86_RS16875	0.14	+1.0
3,808,291	+		ABZR86_RS16875	0.15	-0.8
3,808,292	-		ABZR86_RS16875	0.15	+0.0
3,808,292	-		ABZR86_RS16875	0.15	-0.6
3,808,292	-		ABZR86_RS16875	0.15	+0.2
3,808,347	-		ABZR86_RS16875	0.23	-0.3
3,808,347	-		ABZR86_RS16875	0.23	-1.0
3,808,469	+		ABZR86_RS16875	0.39	-1.2
3,808,469	+		ABZR86_RS16875	0.39	+0.1
3,808,470	-		ABZR86_RS16875	0.39	-0.2
3,808,556	+		ABZR86_RS16875	0.50	+0.2
3,808,556	+		ABZR86_RS16875	0.50	-0.4
3,808,556	+		ABZR86_RS16875	0.50	-0.5
3,808,556	+		ABZR86_RS16875	0.50	-0.5
3,808,557	-		ABZR86_RS16875	0.50	+0.2
3,808,557	-		ABZR86_RS16875	0.50	+0.6
3,808,557	-		ABZR86_RS16875	0.50	-0.5
3,808,557	-		ABZR86_RS16875	0.50	+0.2
3,808,629	+		ABZR86_RS16875	0.60	+0.7
3,808,630	-		ABZR86_RS16875	0.60	+0.2
3,808,630	-		ABZR86_RS16875	0.60	-0.3
3,808,652	+		ABZR86_RS16875	0.63	-0.2
3,808,652	+		ABZR86_RS16875	0.63	+0.1
3,808,653	-		ABZR86_RS16875	0.63	-0.2
3,808,653	-		ABZR86_RS16875	0.63	+0.2
3,808,787	+		ABZR86_RS16875	0.80	-1.3
3,808,787	+		ABZR86_RS16875	0.80	+0.3
3,808,787	+		ABZR86_RS16875	0.80	+0.1
3,808,788	-		ABZR86_RS16875	0.81	+0.0
3,808,788	-		ABZR86_RS16875	0.81	-0.1
3,808,788	-		ABZR86_RS16875	0.81	+0.4
3,808,788	-		ABZR86_RS16875	0.81	+0.1
3,808,790	+		ABZR86_RS16875	0.81	+0.6
3,808,790	+		ABZR86_RS16875	0.81	+0.6
3,808,790	+		ABZR86_RS16875	0.81	+0.6
3,808,791	-		ABZR86_RS16875	0.81	-0.8
3,808,791	-		ABZR86_RS16875	0.81	-2.0
3,808,791	-		ABZR86_RS16875	0.81	+0.6
3,808,808	+		ABZR86_RS16875	0.83	+0.3
3,808,808	+		ABZR86_RS16875	0.83	-0.1
3,808,808	+		ABZR86_RS16875	0.83	+0.1
3,808,808	+		ABZR86_RS16875	0.83	-0.3
3,808,808	+		ABZR86_RS16875	0.83	-1.5
3,808,808	+		ABZR86_RS16875	0.83	-0.5
3,808,809	-		ABZR86_RS16875	0.83	-1.3
3,808,809	-		ABZR86_RS16875	0.83	-1.2
3,808,809	-		ABZR86_RS16875	0.83	+0.3
3,808,809	-		ABZR86_RS16875	0.83	-1.3
3,808,809	-		ABZR86_RS16875	0.83	-0.0
3,808,809	-		ABZR86_RS16875	0.83	+0.1
3,808,809	-		ABZR86_RS16875	0.83	-0.8
3,808,809	-		ABZR86_RS16875	0.83	+1.3
3,808,841	+		ABZR86_RS16875	0.88	+0.2
3,809,055	+				-0.4
3,809,055	+				+0.6
3,809,055	+				+0.6
3,809,056	-				-0.9
3,809,056	-				-0.2
3,809,056	-				-0.5
3,809,056	-				+0.9
3,809,056	-				-0.5
3,809,056	-				+0.1
3,809,085	+				-0.3
3,809,085	+				-0.9
3,809,085	+				-0.9
3,809,085	+				-0.1
3,809,085	+				-0.4
3,809,085	+				+0.6
3,809,086	-				-0.5
3,809,178	+		ABZR86_RS16880	0.10	-0.0
3,809,178	+		ABZR86_RS16880	0.10	+0.1
3,809,179	-		ABZR86_RS16880	0.10	-0.2
3,809,184	+		ABZR86_RS16880	0.11	-0.3
3,809,185	-		ABZR86_RS16880	0.11	-0.5
3,809,185	-		ABZR86_RS16880	0.11	+0.5
3,809,185	-		ABZR86_RS16880	0.11	-1.7
3,809,185	-		ABZR86_RS16880	0.11	-0.6
3,809,205	+		ABZR86_RS16880	0.14	+0.6
3,809,205	+		ABZR86_RS16880	0.14	+0.0
3,809,206	-		ABZR86_RS16880	0.14	+0.3
3,809,206	-		ABZR86_RS16880	0.14	-0.8
3,809,206	-		ABZR86_RS16880	0.14	+0.6
3,809,206	-		ABZR86_RS16880	0.14	-0.9
3,809,211	+		ABZR86_RS16880	0.14	-0.2
3,809,211	+		ABZR86_RS16880	0.14	-0.8
3,809,211	+		ABZR86_RS16880	0.14	-0.3
3,809,211	+		ABZR86_RS16880	0.14	+0.6
3,809,211	+		ABZR86_RS16880	0.14	-0.2
3,809,211	+		ABZR86_RS16880	0.14	-1.5
3,809,212	-		ABZR86_RS16880	0.14	-1.5
3,809,212	-		ABZR86_RS16880	0.14	+0.3
3,809,366	+		ABZR86_RS16880	0.33	+0.3
3,809,366	+		ABZR86_RS16880	0.33	-0.4
3,809,366	+		ABZR86_RS16880	0.33	-1.9
3,809,400	+		ABZR86_RS16880	0.38	+0.5
3,809,400	+		ABZR86_RS16880	0.38	-0.7
3,809,400	+		ABZR86_RS16880	0.38	-0.1
3,809,400	+		ABZR86_RS16880	0.38	+0.4
3,809,401	-		ABZR86_RS16880	0.38	-0.3
3,809,401	-		ABZR86_RS16880	0.38	+0.7
3,809,401	-		ABZR86_RS16880	0.38	-0.8
3,809,401	-		ABZR86_RS16880	0.38	+1.0
3,809,401	-		ABZR86_RS16880	0.38	+1.6
3,809,412	+		ABZR86_RS16880	0.39	-1.5
3,809,596	-		ABZR86_RS16880	0.62	+0.7
3,809,596	-		ABZR86_RS16880	0.62	-0.0
3,809,596	-		ABZR86_RS16880	0.62	+0.3
3,809,847	+				+0.9
3,809,847	+				+0.4
3,809,847	+				+0.3
3,809,847	+				-0.1
3,809,848	-				+0.2
3,809,848	-				+0.1
3,809,848	-				-0.8
3,809,848	-				+0.1
3,809,848	-				-0.6
3,809,850	-				+0.2
3,809,908	-				-0.4
3,809,908	-				-0.7
3,809,908	-				-0.0
3,809,908	-				+0.2
3,809,913	+				-0.1
3,809,913	+				-1.1
3,809,914	-				-1.4
3,809,916	+				+0.6
3,809,916	+				-0.2
3,809,916	+				-2.5
3,809,916	+				-0.6
3,809,916	+				-1.9
3,809,917	-				+1.0
3,809,917	-				-0.6
3,809,917	-				-0.6