Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02790 and ABZR86_RS02795 are separated by 4 nucleotides ABZR86_RS02795 and ABZR86_RS02800 overlap by 4 nucleotides ABZR86_RS02800 and ABZR86_RS02805 are separated by 92 nucleotides ABZR86_RS02805 and ABZR86_RS02810 are separated by 156 nucleotides ABZR86_RS02810 and ABZR86_RS02815 are separated by 108 nucleotides
ABZR86_RS02790: ABZR86_RS02790 - ATP-binding cassette domain-containing protein, at 562,857 to 564,755
_RS02790
ABZR86_RS02795: ABZR86_RS02795 - phosphoglycerate mutase, at 564,760 to 565,674
_RS02795
ABZR86_RS02800: ABZR86_RS02800 - single-stranded-DNA-specific exonuclease RecJ, at 565,671 to 567,389
_RS02800
ABZR86_RS02805: ABZR86_RS02805 - STAS/SEC14 domain-containing protein, at 567,482 to 567,844
_RS02805
ABZR86_RS02810: ABZR86_RS02810 - hypothetical protein, at 568,001 to 568,129
_RS02810
ABZR86_RS02815: ABZR86_RS02815 - asparagine synthase B, at 568,238 to 569,917
_RS02815
Position (kb) 565
566
567
568 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 564.735 kb on + strand at 564.735 kb on + strand at 564.735 kb on + strand at 564.902 kb on - strand, within ABZR86_RS02795 at 565.761 kb on + strand at 565.761 kb on + strand at 565.761 kb on + strand at 565.762 kb on - strand at 565.762 kb on - strand at 565.762 kb on - strand at 565.762 kb on - strand at 565.762 kb on - strand at 565.762 kb on - strand at 565.762 kb on - strand at 565.762 kb on - strand at 565.762 kb on - strand at 565.911 kb on + strand, within ABZR86_RS02800 at 565.911 kb on + strand, within ABZR86_RS02800 at 565.987 kb on - strand, within ABZR86_RS02800 at 566.016 kb on + strand, within ABZR86_RS02800 at 566.259 kb on + strand, within ABZR86_RS02800 at 566.259 kb on + strand, within ABZR86_RS02800 at 566.259 kb on + strand, within ABZR86_RS02800 at 566.259 kb on + strand, within ABZR86_RS02800 at 566.259 kb on + strand, within ABZR86_RS02800 at 566.260 kb on - strand, within ABZR86_RS02800 at 566.260 kb on - strand, within ABZR86_RS02800 at 566.260 kb on - strand, within ABZR86_RS02800 at 566.260 kb on - strand, within ABZR86_RS02800 at 566.388 kb on + strand, within ABZR86_RS02800 at 566.388 kb on + strand, within ABZR86_RS02800 at 566.388 kb on + strand, within ABZR86_RS02800 at 566.388 kb on + strand, within ABZR86_RS02800 at 566.389 kb on - strand, within ABZR86_RS02800 at 566.389 kb on - strand, within ABZR86_RS02800 at 566.389 kb on - strand, within ABZR86_RS02800 at 566.885 kb on + strand, within ABZR86_RS02800 at 567.063 kb on + strand, within ABZR86_RS02800 at 567.063 kb on + strand, within ABZR86_RS02800 at 567.063 kb on + strand, within ABZR86_RS02800 at 567.063 kb on + strand, within ABZR86_RS02800 at 567.064 kb on - strand, within ABZR86_RS02800 at 567.064 kb on - strand, within ABZR86_RS02800 at 567.066 kb on - strand, within ABZR86_RS02800 at 567.276 kb on + strand at 567.277 kb on - strand at 567.277 kb on - strand at 567.416 kb on + strand at 567.416 kb on + strand at 567.416 kb on + strand at 567.417 kb on - strand at 567.417 kb on - strand at 567.417 kb on - strand at 567.449 kb on - strand at 567.558 kb on - strand, within ABZR86_RS02805 at 567.797 kb on + strand, within ABZR86_RS02805 at 567.798 kb on - strand, within ABZR86_RS02805 at 567.845 kb on + strand at 567.845 kb on + strand at 567.845 kb on + strand at 567.845 kb on + strand at 567.845 kb on + strand at 567.845 kb on + strand at 567.845 kb on + strand at 567.845 kb on + strand at 567.846 kb on - strand at 567.846 kb on - strand at 567.846 kb on - strand at 567.846 kb on - strand at 567.846 kb on - strand at 567.846 kb on - strand at 567.846 kb on - strand at 567.846 kb on - strand at 567.846 kb on - strand at 567.846 kb on - strand at 567.846 kb on - strand at 567.846 kb on - strand at 567.846 kb on - strand at 567.849 kb on + strand at 567.849 kb on + strand at 567.849 kb on + strand at 567.849 kb on + strand at 567.850 kb on - strand at 567.850 kb on - strand at 567.850 kb on - strand at 567.850 kb on - strand at 567.850 kb on - strand at 567.850 kb on - strand at 567.850 kb on - strand at 567.850 kb on - strand at 567.850 kb on - strand at 567.935 kb on + strand at 567.935 kb on + strand at 567.935 kb on + strand at 567.935 kb on + strand at 567.935 kb on + strand at 567.935 kb on + strand at 567.935 kb on + strand at 567.935 kb on + strand at 567.936 kb on - strand at 567.936 kb on - strand at 567.991 kb on - strand at 568.044 kb on - strand, within ABZR86_RS02810 at 568.081 kb on + strand, within ABZR86_RS02810 at 568.081 kb on + strand, within ABZR86_RS02810 at 568.082 kb on - strand, within ABZR86_RS02810 at 568.094 kb on - strand, within ABZR86_RS02810 at 568.094 kb on - strand, within ABZR86_RS02810 at 568.094 kb on - strand, within ABZR86_RS02810 at 568.127 kb on + strand at 568.127 kb on + strand at 568.215 kb on + strand at 568.215 kb on + strand at 568.215 kb on + strand at 568.215 kb on + strand at 568.215 kb on + strand at 568.215 kb on + strand at 568.215 kb on + strand at 568.215 kb on + strand at 568.215 kb on + strand at 568.216 kb on - strand at 568.216 kb on - strand at 568.216 kb on - strand at 568.216 kb on - strand at 568.216 kb on - strand at 568.216 kb on - strand at 568.216 kb on - strand at 568.216 kb on - strand at 568.216 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 564,735 + +0.3 564,735 + -1.1 564,735 + -0.3 564,902 - ABZR86_RS02795 0.16 -0.0 565,761 + -0.3 565,761 + -0.1 565,761 + +0.8 565,762 - -0.2 565,762 - +0.1 565,762 - +0.7 565,762 - -0.3 565,762 - -0.1 565,762 - +0.0 565,762 - -0.3 565,762 - -1.8 565,762 - +0.5 565,911 + ABZR86_RS02800 0.14 -0.0 565,911 + ABZR86_RS02800 0.14 +0.1 565,987 - ABZR86_RS02800 0.18 -0.1 566,016 + ABZR86_RS02800 0.20 -0.1 566,259 + ABZR86_RS02800 0.34 +0.3 566,259 + ABZR86_RS02800 0.34 -0.0 566,259 + ABZR86_RS02800 0.34 -1.5 566,259 + ABZR86_RS02800 0.34 +0.6 566,259 + ABZR86_RS02800 0.34 -0.2 566,260 - ABZR86_RS02800 0.34 -2.5 566,260 - ABZR86_RS02800 0.34 -0.2 566,260 - ABZR86_RS02800 0.34 -0.0 566,260 - ABZR86_RS02800 0.34 -0.5 566,388 + ABZR86_RS02800 0.42 -2.5 566,388 + ABZR86_RS02800 0.42 +0.5 566,388 + ABZR86_RS02800 0.42 -3.0 566,388 + ABZR86_RS02800 0.42 +0.1 566,389 - ABZR86_RS02800 0.42 -0.5 566,389 - ABZR86_RS02800 0.42 -0.5 566,389 - ABZR86_RS02800 0.42 +0.4 566,885 + ABZR86_RS02800 0.71 -0.7 567,063 + ABZR86_RS02800 0.81 -0.4 567,063 + ABZR86_RS02800 0.81 -1.1 567,063 + ABZR86_RS02800 0.81 +0.2 567,063 + ABZR86_RS02800 0.81 +0.1 567,064 - ABZR86_RS02800 0.81 +0.0 567,064 - ABZR86_RS02800 0.81 -0.2 567,066 - ABZR86_RS02800 0.81 +0.2 567,276 + +1.2 567,277 - -0.1 567,277 - -0.3 567,416 + +0.4 567,416 + +0.1 567,416 + +0.2 567,417 - -0.3 567,417 - -0.5 567,417 - -0.4 567,449 - -0.3 567,558 - ABZR86_RS02805 0.21 +0.4 567,797 + ABZR86_RS02805 0.87 -0.9 567,798 - ABZR86_RS02805 0.87 +0.0 567,845 + -1.1 567,845 + -0.7 567,845 + +0.7 567,845 + +0.8 567,845 + -1.2 567,845 + +0.5 567,845 + -0.7 567,845 + +0.0 567,846 - -0.3 567,846 - -0.0 567,846 - +0.3 567,846 - +0.1 567,846 - -0.1 567,846 - -0.1 567,846 - -1.1 567,846 - +0.2 567,846 - +1.4 567,846 - -0.4 567,846 - +0.3 567,846 - -1.1 567,846 - +0.5 567,849 + +1.1 567,849 + -1.0 567,849 + -0.5 567,849 + -0.5 567,850 - -0.2 567,850 - +0.0 567,850 - -0.1 567,850 - -0.5 567,850 - +0.4 567,850 - -0.2 567,850 - -1.3 567,850 - -0.3 567,850 - -1.3 567,935 + -0.7 567,935 + -0.4 567,935 + +0.1 567,935 + -0.1 567,935 + -0.2 567,935 + -1.5 567,935 + -1.1 567,935 + +0.1 567,936 - +0.6 567,936 - +0.0 567,991 - -0.6 568,044 - ABZR86_RS02810 0.33 +0.3 568,081 + ABZR86_RS02810 0.62 +0.3 568,081 + ABZR86_RS02810 0.62 +0.9 568,082 - ABZR86_RS02810 0.63 -0.7 568,094 - ABZR86_RS02810 0.72 +0.4 568,094 - ABZR86_RS02810 0.72 +0.2 568,094 - ABZR86_RS02810 0.72 +0.5 568,127 + -0.5 568,127 + -0.5 568,215 + +0.3 568,215 + -0.8 568,215 + -0.7 568,215 + -0.0 568,215 + +0.6 568,215 + -1.1 568,215 + +0.2 568,215 + -2.0 568,215 + +0.5 568,216 - -0.5 568,216 - -0.6 568,216 - +0.5 568,216 - -0.4 568,216 - -0.4 568,216 - -0.1 568,216 - +1.1 568,216 - +0.6 568,216 - +0.7
Or see this region's nucleotide sequence