Strain Fitness in Shewanella loihica PV-4 around Shew_3178

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,782,272	-		Shew_3177	0.33	-0.1
3,782,272	-		Shew_3177	0.33	-0.3
3,782,577	+				-1.6
3,783,186	+				+0.0
3,783,449	-		Shew_3178	0.14	-2.0
3,783,672	+		Shew_3178	0.31	-2.0
3,783,720	-		Shew_3178	0.35	-1.8
3,784,573	+				+0.4
3,784,610	-				+0.5
3,784,650	-				-0.9
3,784,652	+				+0.0
3,784,660	+				-0.1
3,784,835	-		Shew_3179	0.12	-0.3
3,784,900	-		Shew_3179	0.20	+0.1
3,785,057	+		Shew_3179	0.40	-0.2
3,785,173	-		Shew_3179	0.55	-0.2
3,785,262	+		Shew_3179	0.67	-0.1
3,785,586	+				+1.3