Strain Fitness in Shewanella loihica PV-4 around Shew_2809

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,328,382	-		Shew_2808	0.70	+1.9
3,328,598	-		Shew_2808	0.79	+0.2
3,328,823	-		Shew_2808	0.89	-0.1
3,328,830	+		Shew_2808	0.89	-0.2
3,328,844	+		Shew_2808	0.89	+0.0
3,328,866	+				-0.4
3,329,057	-				+0.1
3,329,059	+				-0.1
3,329,064	+				+0.2
3,329,072	-				+0.2
3,329,259	-		Shew_2809	0.17	-1.4
3,329,551	-		Shew_2809	0.48	+0.9
3,329,758	-		Shew_2809	0.70	+0.4
3,329,770	-		Shew_2809	0.72	+0.1
3,329,923	-		Shew_2809	0.88	+0.1
3,330,277	-				-0.5
3,330,505	+		Shew_2810	0.21	-0.2
3,330,736	-		Shew_2810	0.45	+0.6
3,330,778	+		Shew_2810	0.49	-0.3
3,330,890	-		Shew_2810	0.61	+0.1
3,331,031	+		Shew_2810	0.75	+0.8