Strain Fitness in Shewanella loihica PV-4 around Shew_2360
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,759,728 | + | Shew_2359 | 0.11 | +0.5 | |
2,760,280 | + | -0.5 | |||
2,760,582 | + | Shew_2360 | 0.13 | -0.6 | |
2,760,606 | - | Shew_2360 | 0.14 | -0.4 | |
2,760,651 | + | Shew_2360 | 0.18 | -0.4 | |
2,760,685 | + | Shew_2360 | 0.20 | -0.4 | |
2,760,995 | - | Shew_2360 | 0.43 | -0.2 | |
2,761,155 | + | Shew_2360 | 0.55 | +2.6 | |
2,761,181 | + | Shew_2360 | 0.57 | -0.4 | |
2,761,461 | - | Shew_2360 | 0.78 | -0.2 | |
2,761,701 | + | +0.3 | |||
2,761,701 | + | -0.0 | |||
2,762,211 | - | Shew_2361 | 0.44 | -0.2 | |
2,762,366 | + | Shew_2361 | 0.59 | +0.1 | |
2,762,407 | + | Shew_2361 | 0.63 | -0.3 | |
2,762,433 | + | Shew_2361 | 0.66 | -0.2 |
Or see this region's nucleotide sequence