Strain Fitness in Shewanella loihica PV-4 around Shew_1737
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,987,312 | - | +0.2 | |||
1,987,653 | + | Shew_1736 | 0.30 | +0.1 | |
1,987,984 | - | Shew_1737 | 0.16 | -1.2 | |
1,988,424 | + | Shew_1737 | 0.84 | +0.3 | |
1,988,424 | + | Shew_1737 | 0.84 | -0.5 | |
1,988,432 | - | Shew_1737 | 0.85 | -0.7 | |
1,988,432 | - | Shew_1737 | 0.85 | -0.6 | |
1,988,463 | + | -0.3 | |||
1,988,747 | - | Shew_1738 | 0.16 | +0.0 | |
1,988,771 | + | Shew_1738 | 0.18 | +0.6 | |
1,988,802 | + | Shew_1738 | 0.21 | -0.2 | |
1,988,810 | - | Shew_1738 | 0.21 | +0.7 | |
1,989,226 | + | Shew_1738 | 0.58 | -0.3 |
Or see this region's nucleotide sequence