Strain Fitness in Shewanella loihica PV-4 around Shew_0206
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 218,822 | + | Shew_0205 | 0.59 | +0.3 | |
| 218,822 | + | Shew_0205 | 0.59 | +0.4 | |
| 218,822 | + | Shew_0205 | 0.59 | +0.3 | |
| 218,822 | + | Shew_0205 | 0.59 | +0.2 | |
| 218,830 | - | Shew_0205 | 0.60 | +0.2 | |
| 218,944 | + | Shew_0205 | 0.69 | +1.1 | |
| 219,103 | + | Shew_0205 | 0.82 | +0.8 | |
| 219,152 | + | Shew_0205 | 0.86 | +0.3 | |
| 219,152 | + | Shew_0205 | 0.86 | +0.5 | |
| 219,402 | - | +0.5 | |||
| 219,812 | + | Shew_0206 | 0.29 | +0.8 | |
| 219,957 | + | Shew_0206 | 0.40 | +0.5 | |
| 220,015 | + | Shew_0206 | 0.44 | +0.2 | |
| 220,357 | - | Shew_0206 | 0.69 | +0.4 | |
| 220,423 | + | Shew_0206 | 0.74 | +0.6 |
Or see this region's nucleotide sequence