Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
Pf6N2E2_89 - hypothetical protein, at 133,849 to 134,004
_89
Position (kb)
133
134
135 Strain fitness (log2 ratio)
-1
0
1 at 132.912 kb on + strand at 132.921 kb on - strand at 132.921 kb on - strand at 132.921 kb on - strand at 132.999 kb on + strand at 132.999 kb on + strand at 133.037 kb on + strand at 133.037 kb on + strand at 133.038 kb on - strand at 133.096 kb on + strand at 133.096 kb on + strand at 133.146 kb on + strand at 133.146 kb on + strand at 133.146 kb on + strand at 133.146 kb on + strand at 133.146 kb on + strand at 133.146 kb on + strand at 133.146 kb on + strand at 133.146 kb on + strand at 133.146 kb on + strand at 133.146 kb on + strand at 133.146 kb on + strand at 133.147 kb on - strand at 133.147 kb on - strand at 133.147 kb on - strand at 133.147 kb on - strand at 133.147 kb on - strand at 133.147 kb on - strand at 133.147 kb on - strand at 133.198 kb on + strand at 133.285 kb on + strand at 133.303 kb on + strand at 133.304 kb on - strand at 133.307 kb on + strand at 133.372 kb on + strand at 133.415 kb on + strand at 133.452 kb on - strand at 133.459 kb on + strand at 133.460 kb on - strand at 133.491 kb on - strand at 133.558 kb on + strand at 133.558 kb on + strand at 133.603 kb on - strand at 133.660 kb on - strand at 133.672 kb on - strand at 133.678 kb on - strand at 133.720 kb on - strand at 133.842 kb on + strand at 133.842 kb on + strand at 133.843 kb on - strand at 133.850 kb on + strand at 133.850 kb on + strand at 133.851 kb on - strand at 133.851 kb on - strand at 133.851 kb on - strand at 133.853 kb on + strand at 133.853 kb on + strand at 133.853 kb on + strand at 133.853 kb on + strand at 133.854 kb on - strand at 133.854 kb on - strand at 133.854 kb on - strand at 133.854 kb on - strand at 133.911 kb on + strand, within Pf6N2E2_89 at 133.948 kb on + strand, within Pf6N2E2_89 at 133.949 kb on - strand, within Pf6N2E2_89 at 134.009 kb on + strand at 134.023 kb on + strand at 134.023 kb on + strand at 134.023 kb on + strand at 134.024 kb on - strand at 134.129 kb on + strand at 134.156 kb on + strand at 134.273 kb on - strand at 134.292 kb on + strand at 134.292 kb on + strand at 134.293 kb on - strand at 134.353 kb on - strand at 134.439 kb on - strand at 134.480 kb on + strand at 134.481 kb on - strand at 134.481 kb on - strand at 134.482 kb on + strand at 134.482 kb on + strand at 134.583 kb on + strand at 134.583 kb on + strand at 134.583 kb on + strand at 134.584 kb on - strand at 134.587 kb on + strand at 134.587 kb on + strand at 134.588 kb on - strand at 134.588 kb on - strand at 134.620 kb on - strand at 134.679 kb on + strand at 134.679 kb on + strand at 134.680 kb on - strand at 134.680 kb on - strand at 134.695 kb on - strand at 134.727 kb on + strand at 134.775 kb on + strand at 134.775 kb on + strand at 134.775 kb on + strand at 134.776 kb on - strand at 134.776 kb on - strand at 134.776 kb on - strand at 134.908 kb on + strand at 134.908 kb on + strand at 134.957 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 132,912 + +0.4 132,921 - -0.4 132,921 - +0.8 132,921 - +0.3 132,999 + +0.1 132,999 + -0.4 133,037 + -0.3 133,037 + +0.3 133,038 - +1.0 133,096 + +0.5 133,096 + +0.4 133,146 + +0.9 133,146 + +0.6 133,146 + -0.3 133,146 + +0.0 133,146 + +0.8 133,146 + +0.2 133,146 + +0.8 133,146 + +0.4 133,146 + -0.7 133,146 + -0.4 133,146 + +0.3 133,147 - -0.5 133,147 - +1.5 133,147 - +0.3 133,147 - -0.2 133,147 - +0.2 133,147 - +0.0 133,147 - +1.0 133,198 + -0.3 133,285 + -0.1 133,303 + -0.1 133,304 - +0.2 133,307 + +1.2 133,372 + +0.1 133,415 + +0.3 133,452 - -0.7 133,459 + -0.4 133,460 - +1.4 133,491 - +0.0 133,558 + -0.0 133,558 + -0.4 133,603 - +0.8 133,660 - +0.1 133,672 - +0.2 133,678 - +0.3 133,720 - -0.2 133,842 + +0.4 133,842 + -0.8 133,843 - +0.5 133,850 + +0.5 133,850 + +0.5 133,851 - +0.3 133,851 - -0.0 133,851 - +0.6 133,853 + +0.7 133,853 + -0.7 133,853 + +0.0 133,853 + +0.2 133,854 - +1.1 133,854 - +0.1 133,854 - -0.0 133,854 - -0.3 133,911 + Pf6N2E2_89 0.40 +0.7 133,948 + Pf6N2E2_89 0.63 -0.6 133,949 - Pf6N2E2_89 0.64 -0.9 134,009 + -0.2 134,023 + +0.6 134,023 + -0.6 134,023 + -0.3 134,024 - -0.2 134,129 + +0.9 134,156 + +0.2 134,273 - +0.1 134,292 + +0.1 134,292 + -0.2 134,293 - +0.2 134,353 - -0.2 134,439 - +0.2 134,480 + +0.9 134,481 - +0.1 134,481 - +0.8 134,482 + -0.3 134,482 + -0.6 134,583 + +1.2 134,583 + -0.9 134,583 + +0.7 134,584 - +0.6 134,587 + -0.8 134,587 + -0.3 134,588 - -0.5 134,588 - +0.5 134,620 - +0.0 134,679 + +0.3 134,679 + -0.3 134,680 - -0.6 134,680 - +0.6 134,695 - -0.8 134,727 + +0.0 134,775 + +0.4 134,775 + +0.2 134,775 + +0.1 134,776 - +0.4 134,776 - -0.7 134,776 - +0.1 134,908 + +0.3 134,908 + +0.2 134,957 - +0.9
Or see this region's nucleotide sequence