Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3751 and Ga0059261_3752 are separated by 190 nucleotides Ga0059261_3752 and Ga0059261_3753 are separated by 154 nucleotides Ga0059261_3753 and Ga0059261_3754 are separated by 147 nucleotides
Ga0059261_3751: Ga0059261_3751 - Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases, at 3,852,716 to 3,854,272
_3751
Ga0059261_3752: Ga0059261_3752 - Uncharacterized protein conserved in bacteria, at 3,854,463 to 3,854,906
_3752
Ga0059261_3753: Ga0059261_3753 - Diaminopimelate decarboxylase, at 3,855,061 to 3,856,269
_3753
Ga0059261_3754: Ga0059261_3754 - Threonine dehydratase, at 3,856,417 to 3,857,385
_3754
Position (kb)
3855
3856
3857 Strain fitness (log2 ratio)
-1
0
1
2 at 3854.183 kb on + strand at 3854.282 kb on + strand at 3854.282 kb on + strand at 3854.282 kb on + strand at 3854.282 kb on + strand at 3854.282 kb on + strand at 3854.282 kb on + strand at 3854.282 kb on + strand at 3854.282 kb on + strand at 3854.282 kb on + strand at 3854.283 kb on - strand at 3854.283 kb on - strand at 3854.283 kb on - strand at 3854.283 kb on - strand at 3854.283 kb on - strand at 3854.283 kb on - strand at 3854.283 kb on - strand at 3854.283 kb on - strand at 3854.283 kb on - strand at 3854.283 kb on - strand at 3854.283 kb on - strand at 3854.306 kb on + strand at 3854.306 kb on + strand at 3854.319 kb on + strand at 3854.411 kb on - strand at 3854.411 kb on - strand at 3854.411 kb on - strand at 3854.411 kb on - strand at 3854.411 kb on - strand at 3854.806 kb on + strand, within Ga0059261_3752 at 3854.806 kb on + strand, within Ga0059261_3752 at 3854.806 kb on + strand, within Ga0059261_3752 at 3854.806 kb on + strand, within Ga0059261_3752 at 3854.806 kb on + strand, within Ga0059261_3752 at 3854.952 kb on + strand at 3854.952 kb on + strand at 3854.952 kb on + strand at 3854.953 kb on - strand at 3854.953 kb on - strand at 3854.954 kb on + strand at 3854.954 kb on + strand at 3854.955 kb on - strand at 3854.955 kb on - strand at 3854.955 kb on - strand at 3854.955 kb on - strand at 3854.984 kb on - strand at 3856.300 kb on - strand at 3856.300 kb on - strand at 3856.300 kb on - strand at 3856.356 kb on - strand at 3856.356 kb on - strand at 3856.356 kb on - strand at 3856.377 kb on - strand at 3856.377 kb on - strand at 3856.377 kb on - strand at 3856.377 kb on - strand at 3856.377 kb on - strand at 3856.398 kb on + strand at 3856.398 kb on + strand at 3856.399 kb on - strand at 3856.777 kb on + strand, within Ga0059261_3754 at 3856.778 kb on - strand, within Ga0059261_3754
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 3,854,183 + -0.1 3,854,282 + +0.3 3,854,282 + +1.0 3,854,282 + +1.8 3,854,282 + -0.6 3,854,282 + +1.5 3,854,282 + -0.3 3,854,282 + +0.3 3,854,282 + -1.6 3,854,282 + -0.7 3,854,283 - +0.2 3,854,283 - +1.1 3,854,283 - +0.7 3,854,283 - -0.5 3,854,283 - -0.4 3,854,283 - +0.3 3,854,283 - +0.3 3,854,283 - -0.2 3,854,283 - -0.3 3,854,283 - -0.0 3,854,283 - -0.0 3,854,306 + -0.5 3,854,306 + -0.2 3,854,319 + +0.6 3,854,411 - +0.3 3,854,411 - -0.3 3,854,411 - -0.9 3,854,411 - +0.1 3,854,411 - +0.3 3,854,806 + Ga0059261_3752 0.77 -0.4 3,854,806 + Ga0059261_3752 0.77 +0.0 3,854,806 + Ga0059261_3752 0.77 -0.7 3,854,806 + Ga0059261_3752 0.77 -0.5 3,854,806 + Ga0059261_3752 0.77 -0.7 3,854,952 + -0.4 3,854,952 + -0.2 3,854,952 + -0.0 3,854,953 - -0.7 3,854,953 - -0.1 3,854,954 + -0.1 3,854,954 + +0.1 3,854,955 - +0.8 3,854,955 - +1.4 3,854,955 - +0.2 3,854,955 - -0.2 3,854,984 - -1.1 3,856,300 - -0.1 3,856,300 - +1.4 3,856,300 - +0.5 3,856,356 - -0.4 3,856,356 - +0.5 3,856,356 - +1.6 3,856,377 - -1.7 3,856,377 - -0.2 3,856,377 - +1.1 3,856,377 - +0.2 3,856,377 - -0.2 3,856,398 + +0.2 3,856,398 + +0.2 3,856,399 - +1.1 3,856,777 + Ga0059261_3754 0.37 -0.1 3,856,778 - Ga0059261_3754 0.37 -0.8
Or see this region's nucleotide sequence