Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21945

Experiment: Spectinomycin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.1 mg/ml
4,808,942	+				-2.4
4,808,943	-				-0.3
4,809,083	-		AO353_21935	0.19	-0.3
4,809,100	+		AO353_21935	0.22	-1.0
4,809,271	+		AO353_21935	0.56	+0.0
4,809,272	-		AO353_21935	0.56	+0.3
4,809,272	-		AO353_21935	0.56	-0.0
4,809,479	+				-0.7
4,809,479	+				-0.6
4,809,479	+				-0.3
4,809,479	+				-1.6
4,809,480	-				-0.9
4,809,494	+				+0.1
4,809,494	+				+0.3
4,809,494	+				+0.3
4,809,494	+				-0.2
4,809,494	+				-2.3
4,809,494	+				+1.0
4,809,494	+				-0.3
4,809,494	+				+0.2
4,809,494	+				+0.5
4,809,494	+				-0.5
4,809,494	+				-0.9
4,809,494	+				-0.0
4,809,494	+				+0.9
4,809,494	+				+2.6
4,809,494	+				+0.6
4,809,495	-				-0.7
4,809,495	-				+0.2
4,809,495	-				-0.5
4,809,495	-				-1.7
4,809,495	-				+0.1
4,809,495	-				+0.3
4,809,495	-				-0.0
4,809,495	-				-2.0
4,809,495	-				+0.6
4,809,495	-				-0.2
4,809,495	-				+0.1
4,809,626	+				+0.7
4,809,627	-				+1.7
4,809,627	-		AO353_21940	0.36	+0.4
4,809,763	+		AO353_21940	0.67	+0.4
4,809,763	+		AO353_21940	0.67	-0.3
4,809,763	+		AO353_21940	0.67	-0.4
4,809,764	-		AO353_21940	0.67	-0.3
4,809,764	-		AO353_21940	0.67	-1.3
4,809,764	-		AO353_21940	0.67	-0.2
4,809,807	+		AO353_21940	0.77	+0.3
4,810,084	-		AO353_21945	0.35	-0.6
4,810,116	+		AO353_21945	0.41	-2.5
4,810,117	-		AO353_21945	0.42	-0.0
4,810,335	+		AO353_21945	0.84	-0.7
4,810,347	-		AO353_21945	0.86	-0.8
4,810,379	+				+0.4
4,810,380	-				+1.6
4,810,495	-		AO353_21950	0.18	+0.1
4,810,516	+		AO353_21950	0.22	+0.7
4,810,568	+		AO353_21950	0.34	+1.3
4,810,568	+		AO353_21950	0.34	-0.2
4,810,568	+		AO353_21950	0.34	+1.3
4,810,569	-		AO353_21950	0.34	-0.6
4,810,569	-		AO353_21950	0.34	-0.4
4,810,569	-		AO353_21950	0.34	-0.5
4,810,569	-		AO353_21950	0.34	-1.0
4,810,586	+		AO353_21950	0.37	+0.3
4,810,586	+		AO353_21950	0.37	+0.8
4,810,586	+		AO353_21950	0.37	+1.1
4,810,586	+		AO353_21950	0.37	-0.7
4,810,586	+		AO353_21950	0.37	-0.6
4,810,586	+		AO353_21950	0.37	-0.3
4,810,586	+		AO353_21950	0.37	-0.6
4,810,586	+				+0.3
4,810,587	-		AO353_21950	0.38	-1.7
4,810,587	-		AO353_21950	0.38	-1.7
4,810,798	-		AO353_21950	0.84	-1.5
4,810,798	-		AO353_21950	0.84	+1.6
4,810,798	-		AO353_21950	0.84	+0.1
4,810,798	-		AO353_21950	0.84	-0.1
4,810,800	-		AO353_21950	0.84	-1.7
4,810,800	-		AO353_21950	0.84	-0.2
4,810,800	-		AO353_21950	0.84	+1.3
4,810,878	+				-0.4
4,810,959	+				-2.2
4,811,234	+		AO353_21955	0.31	-0.3
4,811,235	-		AO353_21955	0.31	-1.5
4,811,310	+		AO353_21955	0.37	+2.3