Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19435

Experiment: Spectinomycin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.1 mg/ml
4,256,729	+		AO353_19425	0.78	-0.3
4,256,729	+		AO353_19425	0.78	-0.8
4,256,729	+		AO353_19425	0.78	+0.8
4,256,729	+		AO353_19425	0.78	+0.3
4,256,730	-		AO353_19425	0.78	+0.1
4,256,730	-		AO353_19425	0.78	-1.0
4,256,738	+		AO353_19425	0.79	+0.9
4,256,738	+		AO353_19425	0.79	+0.5
4,256,738	+		AO353_19425	0.79	-0.9
4,256,738	+		AO353_19425	0.79	+0.1
4,256,739	-		AO353_19425	0.79	+0.1
4,256,739	-		AO353_19425	0.79	-0.3
4,256,739	-		AO353_19425	0.79	+0.8
4,256,739	-		AO353_19425	0.79	-0.9
4,256,739	-		AO353_19425	0.79	+0.8
4,256,739	-				+1.1
4,256,754	+		AO353_19425	0.82	+0.5
4,256,754	+		AO353_19425	0.82	-1.2
4,256,754	+		AO353_19425	0.82	+0.9
4,256,754	+		AO353_19425	0.82	-0.1
4,256,755	-		AO353_19425	0.82	+0.6
4,256,755	-		AO353_19425	0.82	-1.2
4,256,755	-				-0.8
4,256,755	-		AO353_19425	0.82	+0.4
4,256,755	-		AO353_19425	0.82	-0.8
4,256,802	+				-0.6
4,256,802	+				-0.1
4,256,802	+				+0.4
4,256,802	+				+1.5
4,256,802	+				+2.8
4,256,802	+				+0.5
4,256,803	-				+0.7
4,256,803	-				+0.2
4,256,803	-				+0.1
4,256,811	+				+1.2
4,256,811	+				-0.4
4,256,812	-				-0.0
4,256,812	-				-0.8
4,256,812	-				+0.2
4,256,846	+				-0.2
4,256,882	-				-0.8
4,256,882	-				+0.5
4,256,882	-				+0.1
4,256,884	+				-0.4
4,256,884	+				+0.4
4,256,885	-				+0.0
4,256,885	-				-0.3
4,256,885	-				-0.7
4,256,885	-				+1.1
4,256,899	-				-0.2
4,256,967	+				+0.9
4,256,967	+				+0.0
4,256,968	-				+0.5
4,256,968	-				-0.4
4,256,973	+		AO353_19430	0.10	-1.4
4,256,973	+		AO353_19430	0.10	-0.5
4,256,973	+		AO353_19430	0.10	-0.4
4,256,973	+		AO353_19430	0.10	+0.6
4,256,973	+		AO353_19430	0.10	-1.3
4,256,974	-		AO353_19430	0.10	-0.8
4,256,974	-		AO353_19430	0.10	-0.8
4,256,974	-		AO353_19430	0.10	+1.2
4,256,974	-		AO353_19430	0.10	+0.5
4,256,974	-		AO353_19430	0.10	+1.8
4,256,974	-		AO353_19430	0.10	-0.2
4,256,974	-		AO353_19430	0.10	+1.2
4,256,974	-		AO353_19430	0.10	+1.5
4,256,974	-		AO353_19430	0.10	-0.7
4,256,974	-		AO353_19430	0.10	-2.4
4,257,027	+		AO353_19430	0.18	-1.0
4,257,027	+		AO353_19430	0.18	-0.3
4,257,028	-		AO353_19430	0.18	-1.1
4,257,218	+		AO353_19430	0.43	-0.8
4,257,218	+		AO353_19430	0.43	+0.3
4,257,218	+		AO353_19430	0.43	+0.0
4,257,219	-		AO353_19430	0.43	-0.6
4,257,219	-		AO353_19430	0.43	+0.2
4,257,219	-		AO353_19430	0.43	-0.2
4,257,219	-		AO353_19430	0.43	-1.1
4,257,223	+		AO353_19430	0.44	-0.8
4,257,223	+		AO353_19430	0.44	+0.5
4,257,223	+		AO353_19430	0.44	+0.1
4,257,223	+		AO353_19430	0.44	-1.3
4,257,223	+		AO353_19430	0.44	+0.7
4,257,223	+		AO353_19430	0.44	-1.3
4,257,224	-		AO353_19430	0.44	+1.1
4,257,224	-		AO353_19430	0.44	-0.7
4,257,224	-		AO353_19430	0.44	+0.5
4,257,224	-		AO353_19430	0.44	-0.7
4,257,224	-		AO353_19430	0.44	+1.9
4,257,224	-		AO353_19430	0.44	-0.8
4,257,224	-		AO353_19430	0.44	-0.4
4,257,224	-		AO353_19430	0.44	+0.6
4,257,247	+		AO353_19430	0.47	-0.5
4,257,312	+		AO353_19430	0.56	-0.6
4,257,312	+		AO353_19430	0.56	-0.2
4,257,313	-		AO353_19430	0.56	+0.1
4,257,313	-		AO353_19430	0.56	+0.1
4,257,313	-		AO353_19430	0.56	-0.8
4,257,568	+				-0.8
4,257,568	+				-0.3
4,257,569	-				+0.5
4,257,569	-				-0.8
4,257,569	-				+0.6
4,257,620	-				-0.4
4,257,620	-				-2.0
4,257,625	+				-0.4
4,257,625	+				-0.8
4,257,626	-				-0.4
4,257,626	-				-1.4
4,257,637	+				-0.1
4,257,637	+				+0.2
4,257,637	+				-0.5
4,257,637	+				+0.3
4,257,637	+				-0.4
4,257,638	-				-0.8
4,257,638	-				+0.9
4,257,638	-				-0.3
4,257,638	-				-0.1
4,257,638	-				-2.0
4,257,638	-				-0.4
4,257,686	-				+0.5
4,257,735	+				-1.0
4,257,736	-				-0.7
4,257,870	+		AO353_19435	0.25	+0.1
4,257,871	-		AO353_19435	0.25	-1.2
4,257,954	-		AO353_19435	0.39	-0.5
4,257,954	-		AO353_19435	0.39	-0.1
4,257,999	+		AO353_19435	0.47	-1.1
4,258,087	+		AO353_19435	0.63	-0.6
4,258,240	+		AO353_19435	0.90	+1.1
4,258,241	-		AO353_19435	0.90	-0.5
4,258,241	-		AO353_19435	0.90	+0.5
4,258,255	-				-0.4
4,258,296	+				-0.4
4,258,296	+				+0.3
4,258,296	+				-0.5
4,258,296	+				-0.2
4,258,297	-				-0.1
4,258,297	-				+1.0
4,258,297	-				-1.0
4,258,297	-				-0.7
4,258,297	-				-0.7
4,258,312	+				-0.5
4,258,312	+				+0.0
4,258,312	+				+0.9
4,258,343	+		AO353_19440	0.11	-0.2
4,258,344	-		AO353_19440	0.12	+0.8
4,258,344	-		AO353_19440	0.12	-0.1
4,258,420	+		AO353_19440	0.39	+1.3
4,258,421	-		AO353_19440	0.39	-2.4
4,258,421	-		AO353_19440	0.39	-0.3
4,258,421	-		AO353_19440	0.39	-0.2
4,258,421	-		AO353_19440	0.39	-0.3
4,258,456	+		AO353_19440	0.51	+0.2
4,258,456	+		AO353_19440	0.51	+0.0
4,258,456	+		AO353_19440	0.51	-0.1
4,258,456	+		AO353_19440	0.51	-0.3
4,258,456	+		AO353_19440	0.51	+1.0
4,258,456	+		AO353_19440	0.51	-0.1
4,258,456	+		AO353_19440	0.51	-0.6
4,258,456	+		AO353_19440	0.51	-1.6
4,258,456	+		AO353_19440	0.51	-0.5
4,258,457	-		AO353_19440	0.52	+0.8
4,258,457	-		AO353_19440	0.52	+0.9
4,258,457	-		AO353_19440	0.52	-1.3
4,258,493	+		AO353_19440	0.65	-1.5
4,258,494	-		AO353_19440	0.65	+0.0
4,258,494	-		AO353_19440	0.65	+0.5
4,258,494	-		AO353_19440	0.65	+0.9
4,258,563	+		AO353_19440	0.89	+0.5
4,258,563	+		AO353_19440	0.89	+0.0
4,258,564	-				-1.2
4,258,564	-				-1.3
4,258,564	-				-0.0
4,258,575	+				+0.3
4,258,602	+				-0.1
4,258,602	+				+0.6
4,258,603	-				+0.3
4,258,603	-				+0.2
4,258,603	-				-0.4
4,258,603	-				+1.5
4,258,603	-				+0.9
4,258,605	+				-0.7
4,258,605	+				-0.2
4,258,605	+				-0.7
4,258,605	+				-1.3
4,258,654	+				-0.7
4,258,654	+				-0.2
4,258,703	+				-1.3
4,258,703	+				-0.4
4,258,704	-				-0.8
4,258,704	-				+0.1
4,258,731	+				+0.5
4,258,731	+				-0.1
4,258,731	+				+0.1
4,258,731	+				-2.0
4,258,732	-				+0.4
4,258,732	-				+1.7
4,258,735	+				-0.2
4,258,736	-				-0.5
4,258,736	-				+0.8
4,258,748	+				+1.2
4,258,748	+				-0.2
4,258,759	-				-0.5
4,258,766	+				+0.6
4,258,766	+				-0.7
4,258,766	+				+0.1
4,258,767	-				-0.1
4,258,767	-				-0.4
4,258,767	-				+1.0
4,258,773	-				+0.7
4,258,814	+				+0.8
4,258,814	+				-1.0
4,258,814	+				-0.5
4,258,815	-				+0.5
4,258,815	-				-0.8
4,258,866	+		AO353_19445	0.12	-0.9
4,258,866	+		AO353_19445	0.12	+1.2
4,258,866	+		AO353_19445	0.12	+0.6
4,258,866	+		AO353_19445	0.12	-1.3
4,258,866	+		AO353_19445	0.12	+0.1
4,258,866	+		AO353_19445	0.12	-1.5
4,258,866	+		AO353_19445	0.12	-0.1
4,258,866	+		AO353_19445	0.12	-0.2
4,258,866	+		AO353_19445	0.12	-0.4
4,258,866	+		AO353_19445	0.12	+1.5
4,258,866	+		AO353_19445	0.12	+0.5
4,258,867	-		AO353_19445	0.12	+0.6
4,258,867	-		AO353_19445	0.12	+0.2
4,258,867	-		AO353_19445	0.12	+0.5
4,258,867	-		AO353_19445	0.12	+1.3
4,258,867	-		AO353_19445	0.12	+0.4
4,258,867	-		AO353_19445	0.12	-2.5
4,258,975	+		AO353_19445	0.24	-1.3
4,258,975	+		AO353_19445	0.24	+1.0
4,258,975	+		AO353_19445	0.24	-0.8
4,258,975	+		AO353_19445	0.24	+1.0
4,258,975	+		AO353_19445	0.24	-0.7
4,258,975	+		AO353_19445	0.24	-0.7
4,258,975	+		AO353_19445	0.24	-0.5
4,258,975	+		AO353_19445	0.24	-0.8
4,258,976	-		AO353_19445	0.24	-0.2
4,258,976	-		AO353_19445	0.24	+0.8
4,258,976	-		AO353_19445	0.24	-0.1
4,258,976	-		AO353_19445	0.24	+0.6
4,258,976	-		AO353_19445	0.24	-0.8
4,258,977	+		AO353_19445	0.24	-0.5
4,258,977	+		AO353_19445	0.24	-1.0
4,258,977	+		AO353_19445	0.24	-1.7
4,258,977	+		AO353_19445	0.24	+0.6
4,258,977	+		AO353_19445	0.24	-0.2
4,258,978	-		AO353_19445	0.25	+0.2
4,258,978	-		AO353_19445	0.25	-0.6
4,258,978	-		AO353_19445	0.25	-0.1
4,258,978	-		AO353_19445	0.25	-1.1
4,258,978	-		AO353_19445	0.25	+0.8
4,259,011	+				-0.1
4,259,125	+		AO353_19445	0.41	+1.5
4,259,125	+		AO353_19445	0.41	+1.3
4,259,125	+		AO353_19445	0.41	-0.1
4,259,157	+		AO353_19445	0.45	+1.1
4,259,157	+		AO353_19445	0.45	+0.3
4,259,157	+		AO353_19445	0.45	-0.7
4,259,158	-		AO353_19445	0.45	+2.3
4,259,171	+		AO353_19445	0.46	-1.0
4,259,171	+		AO353_19445	0.46	-0.1
4,259,171	+		AO353_19445	0.46	-0.8
4,259,171	+		AO353_19445	0.46	-2.4
4,259,171	+		AO353_19445	0.46	+0.1
4,259,172	-		AO353_19445	0.46	-0.5
4,259,172	-		AO353_19445	0.46	-0.1
4,259,172	-		AO353_19445	0.46	+0.5
4,259,172	-		AO353_19445	0.46	+1.2
4,259,191	-		AO353_19445	0.49	-0.5
4,259,201	+		AO353_19445	0.50	-0.4
4,259,233	+		AO353_19445	0.53	-0.7
4,259,233	+		AO353_19445	0.53	+0.6
4,259,233	+		AO353_19445	0.53	+0.0
4,259,234	-		AO353_19445	0.53	-0.6
4,259,234	-		AO353_19445	0.53	-0.4
4,259,234	-		AO353_19445	0.53	-0.5
4,259,234	-		AO353_19445	0.53	+0.0
4,259,237	+		AO353_19445	0.54	-0.8
4,259,237	+		AO353_19445	0.54	-0.1
4,259,237	+		AO353_19445	0.54	+1.5
4,259,237	+		AO353_19445	0.54	-0.7
4,259,237	+		AO353_19445	0.54	-0.5
4,259,237	+		AO353_19445	0.54	-1.9
4,259,237	+		AO353_19445	0.54	-0.3
4,259,238	-		AO353_19445	0.54	+0.3
4,259,238	-		AO353_19445	0.54	-0.2
4,259,238	-		AO353_19445	0.54	-1.1
4,259,238	-		AO353_19445	0.54	+1.1
4,259,238	-		AO353_19445	0.54	-1.1
4,259,238	-		AO353_19445	0.54	+0.0
4,259,238	-		AO353_19445	0.54	+0.5
4,259,238	-		AO353_19445	0.54	-0.2
4,259,238	-		AO353_19445	0.54	-0.1
4,259,238	-		AO353_19445	0.54	-0.5
4,259,238	-		AO353_19445	0.54	+0.4
4,259,239	+		AO353_19445	0.54	-0.8
4,259,239	+		AO353_19445	0.54	-2.3
4,259,239	+		AO353_19445	0.54	+0.0
4,259,239	+		AO353_19445	0.54	-0.5
4,259,239	+		AO353_19445	0.54	+0.3
4,259,239	+		AO353_19445	0.54	-1.5
4,259,239	+		AO353_19445	0.54	-1.0
4,259,239	+		AO353_19445	0.54	-0.8
4,259,239	+		AO353_19445	0.54	-1.1
4,259,239	+		AO353_19445	0.54	+0.2
4,259,239	+		AO353_19445	0.54	+0.5
4,259,239	+		AO353_19445	0.54	-1.1
4,259,239	+		AO353_19445	0.54	-0.1
4,259,239	+		AO353_19445	0.54	+0.3
4,259,239	+		AO353_19445	0.54	+0.2
4,259,239	+		AO353_19445	0.54	+0.8
4,259,239	+		AO353_19445	0.54	-0.5
4,259,239	+		AO353_19445	0.54	-1.0
4,259,239	+		AO353_19445	0.54	+0.2
4,259,239	+		AO353_19445	0.54	-1.3
4,259,239	+		AO353_19445	0.54	-0.6
4,259,239	+		AO353_19445	0.54	+0.5
4,259,239	+		AO353_19445	0.54	-0.2
4,259,239	+		AO353_19445	0.54	-0.7
4,259,239	+		AO353_19445	0.54	+0.3
4,259,239	+		AO353_19445	0.54	-0.5
4,259,239	+		AO353_19445	0.54	-0.9
4,259,239	+		AO353_19445	0.54	-0.2
4,259,239	+		AO353_19445	0.54	-0.1
4,259,239	+		AO353_19445	0.54	+0.1
4,259,239	+		AO353_19445	0.54	+1.1
4,259,239	+		AO353_19445	0.54	-2.5
4,259,240	-		AO353_19445	0.54	+1.2
4,259,240	-		AO353_19445	0.54	-0.0
4,259,240	-		AO353_19445	0.54	-0.1
4,259,240	-		AO353_19445	0.54	-0.7
4,259,240	-		AO353_19445	0.54	-0.2
4,259,240	-		AO353_19445	0.54	-0.6
4,259,240	-		AO353_19445	0.54	-0.5
4,259,240	-		AO353_19445	0.54	-0.1
4,259,240	-		AO353_19445	0.54	-0.3
4,259,240	-		AO353_19445	0.54	+0.6
4,259,240	-		AO353_19445	0.54	-0.4
4,259,240	-		AO353_19445	0.54	+0.5
4,259,240	-		AO353_19445	0.54	-0.9
4,259,240	-		AO353_19445	0.54	-0.9
4,259,240	-		AO353_19445	0.54	-0.1
4,259,240	-		AO353_19445	0.54	-0.9
4,259,240	-		AO353_19445	0.54	+0.8
4,259,240	-		AO353_19445	0.54	-0.2
4,259,240	-		AO353_19445	0.54	-0.2
4,259,240	-		AO353_19445	0.54	-0.1
4,259,240	-		AO353_19445	0.54	+0.3
4,259,240	-		AO353_19445	0.54	+0.3
4,259,240	-		AO353_19445	0.54	-1.6
4,259,240	-		AO353_19445	0.54	+1.1
4,259,240	-		AO353_19445	0.54	+0.3
4,259,240	-		AO353_19445	0.54	-2.3
4,259,240	-		AO353_19445	0.54	-0.3
4,259,240	-		AO353_19445	0.54	-0.1
4,259,243	+		AO353_19445	0.54	+0.6
4,259,243	+		AO353_19445	0.54	-2.2
4,259,243	+		AO353_19445	0.54	-1.2
4,259,244	-		AO353_19445	0.55	+0.5
4,259,244	-		AO353_19445	0.55	+1.0
4,259,244	-		AO353_19445	0.55	-1.7
4,259,244	-		AO353_19445	0.55	-0.1
4,259,244	-		AO353_19445	0.55	+0.5
4,259,244	-		AO353_19445	0.55	-0.4
4,259,244	-		AO353_19445	0.55	+0.4
4,259,244	-		AO353_19445	0.55	-1.7
4,259,244	-		AO353_19445	0.55	-0.5