Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08170

Experiment: Spectinomycin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.1 mg/ml
1,800,163	-				+0.5
1,800,188	+				+0.6
1,800,188	+				+0.5
1,800,188	+				-0.1
1,800,188	+				-0.4
1,800,188	+				-0.1
1,800,188	+				+1.1
1,800,188	+				-0.9
1,800,188	+				-0.8
1,800,188	+				+0.5
1,800,188	+				+0.1
1,800,188	+				+2.1
1,800,189	-				-0.7
1,800,189	-				-1.5
1,800,189	-				+0.1
1,800,189	-				+0.3
1,800,189	-				-0.2
1,800,189	-				+0.0
1,800,189	-				-0.9
1,800,189	-				+0.3
1,800,189	-				-1.5
1,800,189	-				-1.2
1,800,189	-				-1.4
1,800,196	+				+0.5
1,800,196	+				+1.1
1,800,196	+				-0.6
1,800,196	+				-0.4
1,800,196	+				+0.5
1,800,196	+				-0.4
1,800,196	+				-1.2
1,800,196	+				-0.7
1,800,196	+				-0.1
1,800,196	+				+0.5
1,800,196	+				+0.8
1,800,196	+				+0.7
1,800,197	-				-1.5
1,800,197	-				-1.4
1,800,197	-				-1.9
1,800,197	-				-1.7
1,800,197	-				-1.4
1,800,197	-				-1.1
1,800,197	-				-1.2
1,800,197	-				-1.8
1,800,197	-				-1.1
1,800,199	-				-0.5
1,800,199	-				-0.5
1,800,199	-				+1.1
1,800,606	+		AO353_08165	0.48	+0.5
1,800,741	+		AO353_08165	0.65	-0.5
1,800,741	+		AO353_08165	0.65	+0.8
1,800,741	+		AO353_08165	0.65	+0.8
1,800,741	+		AO353_08165	0.65	-1.4
1,800,741	+		AO353_08165	0.65	-0.1
1,800,741	+		AO353_08165	0.65	+0.1
1,800,742	-		AO353_08165	0.65	-0.5
1,800,883	+		AO353_08165	0.82	+1.1
1,800,883	+		AO353_08165	0.82	+0.1
1,800,883	+		AO353_08165	0.82	+1.8
1,800,884	-		AO353_08165	0.82	-0.5
1,801,037	+				+0.6
1,801,037	+				-0.5
1,801,037	+				-0.1
1,801,037	+				+0.4
1,801,037	+				-1.2
1,801,037	+				-0.9
1,801,037	+				-0.4
1,801,037	+				-1.5
1,801,037	+				-1.1
1,801,037	+				-1.5
1,801,037	+				+0.7
1,801,037	+				+1.1
1,801,037	+				-0.3
1,801,037	+				-1.2
1,801,038	-				-0.5
1,801,038	-				-1.1
1,801,038	-				-3.1
1,801,038	-				-0.9
1,801,051	+				+0.1
1,801,052	-				-2.0
1,801,107	+				-0.5
1,801,108	-				-0.2
1,801,133	+		AO353_08170	0.14	-0.7
1,801,134	-		AO353_08170	0.14	-0.7
1,801,161	+		AO353_08170	0.18	-1.2
1,801,162	-		AO353_08170	0.19	-1.6
1,801,162	-		AO353_08170	0.19	-1.4
1,801,265	-		AO353_08170	0.36	-1.6
1,801,265	-		AO353_08170	0.36	-1.1
1,801,295	-		AO353_08170	0.41	-1.4
1,801,386	-		AO353_08170	0.57	-2.1
1,801,396	-		AO353_08170	0.58	-1.2
1,801,396	-		AO353_08170	0.58	+0.3
1,801,396	-		AO353_08170	0.58	-0.5
1,801,475	+		AO353_08170	0.72	-1.6
1,801,476	-		AO353_08170	0.72	-0.1
1,801,505	+		AO353_08170	0.77	-1.2
1,801,553	+		AO353_08170	0.85	-1.3
1,801,599	+				-1.6
1,801,599	+				-1.1
1,801,600	-				-1.4
1,801,600	-				+0.1
1,801,600	-				+1.4
1,801,646	+				+1.2
1,801,646	+				-0.8
1,801,646	+				-0.7
1,801,646	+				-0.0
1,801,646	+				-1.5
1,801,646	+				-0.4
1,801,646	+				-0.5
1,801,646	+				+0.5
1,801,646	+				-0.9
1,801,647	-				-0.7
1,801,647	-				-1.8
1,801,787	+		AO353_08175	0.49	-1.4
1,801,788	-		AO353_08175	0.50	+0.3
1,801,988	+				+0.2
1,801,988	+				+0.9
1,801,989	-				-0.2
1,801,989	-				+0.2
1,801,989	-				+0.1
1,801,989	-				-0.4
1,801,989	-				-0.9
1,801,989	-				+0.5
1,801,989	-				+1.1
1,802,018	+				-0.4
1,802,018	+				+0.9
1,802,018	+				-0.8
1,802,018	+				+0.1
1,802,019	-				-0.0
1,802,019	-				+1.4
1,802,109	+				-1.1
1,802,109	+				+0.8
1,802,109	+				-1.1
1,802,110	-				-1.4
1,802,110	-				+1.1
1,802,110	-				-0.6
1,802,115	+				-0.5
1,802,115	+				+1.1
1,802,115	+				+0.1
1,802,115	+				+1.2
1,802,115	+				+1.3
1,802,116	-				-1.0
1,802,116	-				+0.3
1,802,116	-				+0.1
1,802,116	-				-0.0
1,802,246	+				-0.1
1,802,246	+				-1.8
1,802,246	+				-1.5
1,802,246	+				-0.9
1,802,246	+				+0.1
1,802,246	+				+0.3
1,802,246	+				+0.2
1,802,246	+				-1.2
1,802,246	+				+1.5
1,802,247	-				+0.5
1,802,247	-				-1.0
1,802,247	-				+0.1
1,802,247	-				-0.9
1,802,247	-				+0.2
1,802,247	-				+0.4
1,802,247	-				-0.0
1,802,258	+		AO353_08180	0.10	+0.4
1,802,258	+		AO353_08180	0.10	+1.1
1,802,259	-		AO353_08180	0.10	+0.1
1,802,259	-		AO353_08180	0.10	-1.1
1,802,259	-		AO353_08180	0.10	-0.5
1,802,259	-		AO353_08180	0.10	+0.8
1,802,259	-		AO353_08180	0.10	-0.9
1,802,267	+		AO353_08180	0.11	-1.2
1,802,267	+		AO353_08180	0.11	+0.9
1,802,267	+		AO353_08180	0.11	+1.3
1,802,268	-		AO353_08180	0.11	-0.1
1,802,268	-		AO353_08180	0.11	-1.2
1,802,268	-		AO353_08180	0.11	+0.3
1,802,268	-		AO353_08180	0.11	+0.1
1,802,268	-		AO353_08180	0.11	+0.1
1,802,268	-		AO353_08180	0.11	+0.1
1,802,268	-		AO353_08180	0.11	-0.6
1,802,353	+		AO353_08180	0.18	-0.1
1,802,366	-		AO353_08180	0.19	-0.1
1,802,366	-		AO353_08180	0.19	-0.2
1,802,366	-		AO353_08180	0.19	+1.5
1,802,634	+		AO353_08180	0.43	+0.4
1,802,634	+		AO353_08180	0.43	-0.2
1,802,634	+		AO353_08180	0.43	+1.6
1,802,635	-		AO353_08180	0.43	-0.5