Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_00540

Experiment: Spectinomycin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.1 mg/ml
112,194	+		AO353_00535	0.60	+0.2
112,194	+		AO353_00535	0.60	+0.3
112,194	+		AO353_00535	0.60	-1.4
112,194	+		AO353_00535	0.60	-0.1
112,194	+		AO353_00535	0.60	+0.3
112,194	+		AO353_00535	0.60	-1.1
112,195	-		AO353_00535	0.60	+1.0
112,268	+		AO353_00535	0.64	-0.7
112,268	+		AO353_00535	0.64	+0.0
112,268	+		AO353_00535	0.64	+1.5
112,268	+		AO353_00535	0.64	-0.5
112,268	+		AO353_00535	0.64	-1.5
112,268	+		AO353_00535	0.64	-1.0
112,269	-		AO353_00535	0.64	-0.2
112,269	-		AO353_00535	0.64	-0.5
112,269	-		AO353_00535	0.64	-0.3
112,269	-		AO353_00535	0.64	+0.5
112,310	+		AO353_00535	0.66	-0.5
112,310	+		AO353_00535	0.66	+1.0
112,310	+		AO353_00535	0.66	-0.1
112,310	+		AO353_00535	0.66	+0.5
112,310	+		AO353_00535	0.66	-0.4
112,310	+		AO353_00535	0.66	+0.3
112,310	+		AO353_00535	0.66	-0.3
112,310	+		AO353_00535	0.66	-0.2
112,310	+		AO353_00535	0.66	-0.4
112,311	-		AO353_00535	0.66	+0.3
112,311	-		AO353_00535	0.66	-0.1
112,311	-		AO353_00535	0.66	-0.1
112,311	-		AO353_00535	0.66	-0.1
112,311	-		AO353_00535	0.66	-1.3
112,311	-		AO353_00535	0.66	-0.1
112,311	-		AO353_00535	0.66	+1.7
112,311	-		AO353_00535	0.66	-0.3
112,311	-		AO353_00535	0.66	-0.9
112,311	-		AO353_00535	0.66	-0.3
112,311	-		AO353_00535	0.66	+1.2
112,311	-		AO353_00535	0.66	-0.6
112,311	-		AO353_00535	0.66	+0.1
112,311	-		AO353_00535	0.66	-1.9
112,311	-		AO353_00535	0.66	-0.1
112,311	-		AO353_00535	0.66	-0.6
112,311	-		AO353_00535	0.66	+0.5
112,444	-		AO353_00535	0.74	-0.5
112,444	-		AO353_00535	0.74	-0.5
112,580	+		AO353_00535	0.81	+1.5
112,580	+		AO353_00535	0.81	-0.3
112,581	-		AO353_00535	0.81	+1.1
112,581	-		AO353_00535	0.81	-1.5
112,581	-		AO353_00535	0.81	-0.5
112,598	+		AO353_00535	0.82	-1.3
112,599	-		AO353_00535	0.82	+0.8
112,599	-		AO353_00535	0.82	+0.1
112,806	+				-2.1
112,807	-				+0.8
112,807	-				+0.0
112,807	-				-1.1
112,807	-				+0.1
112,965	+				+0.3
112,965	+				+0.7
112,965	+				+0.2
112,966	-				-0.9
112,992	+				-0.1
113,012	+				-0.1
113,013	-				-1.3
113,016	+				+0.2
113,016	+				-1.2
113,016	+				+0.7
113,016	+				-0.8
113,016	+				-0.1
113,016	+				-0.3
113,016	+				-1.3
113,017	-				+0.1
113,017	-				-0.7
113,017	-				+0.7
113,017	-				+0.7
113,017	-				-0.2
113,017	-				-1.0
113,017	-				-0.1
113,031	+				-1.0
113,031	+				+0.3
113,032	-				-0.1
113,032	-				-0.2
113,032	-				-1.9
113,038	+				+0.5
113,038	+				-0.9
113,038	+				+0.7
113,038	+				-0.8
113,038	+				+0.3
113,038	+				-0.8
113,039	-				-1.0
113,039	-				-0.2
113,039	-				+0.0
113,039	-				-1.1
113,039	-				+0.8
113,039	-				-0.4
113,039	-				-0.1
113,039	-				-1.3
113,039	-				+0.2
113,039	-				+0.0
113,053	+				-0.9
113,054	-				+1.9
113,054	-				+0.7
113,054	-				+0.7
113,078	+				+0.5
113,078	+				-0.2
113,095	+				-1.2
113,095	+				+0.5
113,116	-				-0.3
113,150	+				-0.1
113,150	+				-0.9
113,155	+				+0.1
113,155	+				+1.0
113,155	+				+0.6
113,155	+				-0.4
113,156	-				+1.0
113,156	-				+0.5
113,156	-				+1.5
113,156	-				+0.8
113,285	+		AO353_00540	0.56	+0.5
113,286	-		AO353_00540	0.56	-1.9
113,301	+		AO353_00540	0.64	-1.2
113,301	+		AO353_00540	0.64	-1.7
113,301	+		AO353_00540	0.64	-0.1
113,301	+		AO353_00540	0.64	+0.8
113,302	-		AO353_00540	0.65	+0.6
113,302	-		AO353_00540	0.65	-1.7
113,302	-		AO353_00540	0.65	-1.1
113,365	+				-0.8
113,365	+				+0.0
113,366	-				+0.0
113,366	-				+0.5
113,366	-				+0.5
113,366	-				+0.9
113,369	+				-0.2
113,369	+				-0.5
113,369	+				+0.1
113,369	+				+0.5
113,369	+				-0.1
113,370	-				+0.7
113,370	-				-0.6
113,370	-				+1.0
113,375	+				-0.1
113,375	+				-0.1
113,375	+				+0.8
113,375	+				-0.1
113,375	+				-0.1
113,375	+				+0.5
113,375	+				+0.3
113,375	+				+0.9
113,375	+				-1.2
113,375	+				-1.7
113,376	-				+0.5
113,376	-				-0.8
113,376	-				+0.3
113,376	-				-1.0
113,376	-				-0.0
113,376	-				-0.9
113,376	-				-0.5
113,411	+				-0.3
113,411	+				-0.3
113,412	-				-0.9
113,412	-				+0.9
113,418	+				-0.5
113,418	+				-0.3
113,419	-				+0.1
113,419	-				-1.1
113,444	+				-0.0
113,444	+				-0.0
113,445	-				+0.4
113,463	+				-0.9
113,464	-				-0.9
113,464	-				+0.7
113,464	-				-0.3
113,464	-				+0.3
113,836	+		AO353_00545	0.29	-1.5