Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS20195 and ABZR86_RS20200 are separated by 9 nucleotides ABZR86_RS20200 and ABZR86_RS20205 overlap by 4 nucleotides ABZR86_RS20205 and ABZR86_RS20210 are separated by 293 nucleotides ABZR86_RS20210 and ABZR86_RS20215 are separated by 7 nucleotides
ABZR86_RS20195: ABZR86_RS20195 - flagellar hook-length control protein FliK, at 533,267 to 534,307
_RS20195
ABZR86_RS20200: ABZR86_RS20200 - type II toxin-antitoxin system HicB family antitoxin, at 534,317 to 534,658
_RS20200
ABZR86_RS20205: ABZR86_RS20205 - type II toxin-antitoxin system HicA family toxin, at 534,655 to 534,849
_RS20205
ABZR86_RS20210: ABZR86_RS20210 - flagellar basal body-associated protein FliL, at 535,143 to 535,658
_RS20210
ABZR86_RS20215: ABZR86_RS20215 - flagellar motor switch protein FliM, at 535,666 to 536,682
_RS20215
Position (kb) 535
536 Strain fitness (log2 ratio) -2
-1
0
1 at 534.261 kb on + strand at 534.295 kb on + strand at 534.296 kb on - strand at 534.459 kb on + strand, within ABZR86_RS20200 at 534.549 kb on + strand, within ABZR86_RS20200 at 535.074 kb on + strand at 535.237 kb on + strand, within ABZR86_RS20210 at 535.269 kb on + strand, within ABZR86_RS20210 at 535.270 kb on - strand, within ABZR86_RS20210 at 535.270 kb on - strand, within ABZR86_RS20210 at 535.270 kb on - strand, within ABZR86_RS20210 at 535.407 kb on + strand, within ABZR86_RS20210 at 535.408 kb on - strand, within ABZR86_RS20210 at 535.408 kb on - strand, within ABZR86_RS20210 at 535.408 kb on - strand, within ABZR86_RS20210 at 535.408 kb on - strand, within ABZR86_RS20210 at 535.521 kb on + strand, within ABZR86_RS20210 at 535.521 kb on + strand, within ABZR86_RS20210 at 535.522 kb on - strand, within ABZR86_RS20210 at 535.632 kb on + strand at 535.633 kb on - strand at 535.855 kb on + strand, within ABZR86_RS20215 at 536.285 kb on + strand, within ABZR86_RS20215 at 536.323 kb on + strand, within ABZR86_RS20215 at 536.323 kb on + strand, within ABZR86_RS20215
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 534,261 + +1.6 534,295 + +0.1 534,296 - +0.0 534,459 + ABZR86_RS20200 0.42 -0.8 534,549 + ABZR86_RS20200 0.68 -0.2 535,074 + -0.2 535,237 + ABZR86_RS20210 0.18 -1.0 535,269 + ABZR86_RS20210 0.24 -0.6 535,270 - ABZR86_RS20210 0.25 -0.5 535,270 - ABZR86_RS20210 0.25 +0.7 535,270 - ABZR86_RS20210 0.25 +0.2 535,407 + ABZR86_RS20210 0.51 +0.2 535,408 - ABZR86_RS20210 0.51 -2.2 535,408 - ABZR86_RS20210 0.51 +0.2 535,408 - ABZR86_RS20210 0.51 -1.0 535,408 - ABZR86_RS20210 0.51 -0.2 535,521 + ABZR86_RS20210 0.73 +0.2 535,521 + ABZR86_RS20210 0.73 +0.3 535,522 - ABZR86_RS20210 0.73 +0.1 535,632 + -0.5 535,633 - -0.6 535,855 + ABZR86_RS20215 0.19 +0.1 536,285 + ABZR86_RS20215 0.61 +0.2 536,323 + ABZR86_RS20215 0.65 +0.3 536,323 + ABZR86_RS20215 0.65 +0.1
Or see this region's nucleotide sequence