Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18675 and ABZR86_RS18680 are separated by 170 nucleotides ABZR86_RS18680 and ABZR86_RS18685 are separated by 63 nucleotides
ABZR86_RS18675: ABZR86_RS18675 - phosphoglycerate kinase, at 160,172 to 161,335
_RS18675
ABZR86_RS18680: ABZR86_RS18680 - maleylacetoacetate isomerase, at 161,506 to 162,171
_RS18680
ABZR86_RS18685: ABZR86_RS18685 - PilT/PilU family type 4a pilus ATPase, at 162,235 to 163,350
_RS18685
Position (kb) 161
162
163 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 160.650 kb on + strand, within ABZR86_RS18675 at 160.881 kb on + strand, within ABZR86_RS18675 at 160.881 kb on + strand, within ABZR86_RS18675 at 160.882 kb on - strand, within ABZR86_RS18675 at 160.965 kb on + strand, within ABZR86_RS18675 at 160.966 kb on - strand, within ABZR86_RS18675 at 161.068 kb on - strand, within ABZR86_RS18675 at 161.068 kb on - strand, within ABZR86_RS18675 at 161.379 kb on + strand at 161.379 kb on + strand at 161.379 kb on + strand at 161.380 kb on - strand at 161.380 kb on - strand at 161.380 kb on - strand at 161.412 kb on - strand at 161.412 kb on - strand at 161.470 kb on + strand at 161.471 kb on - strand at 161.471 kb on - strand at 161.471 kb on - strand at 161.528 kb on - strand at 161.555 kb on - strand at 161.555 kb on - strand at 161.561 kb on + strand at 161.594 kb on - strand, within ABZR86_RS18680 at 161.651 kb on - strand, within ABZR86_RS18680 at 161.734 kb on + strand, within ABZR86_RS18680 at 161.734 kb on + strand, within ABZR86_RS18680 at 161.734 kb on + strand, within ABZR86_RS18680 at 161.735 kb on - strand, within ABZR86_RS18680 at 161.735 kb on - strand, within ABZR86_RS18680 at 161.735 kb on - strand, within ABZR86_RS18680 at 161.863 kb on + strand, within ABZR86_RS18680 at 161.864 kb on - strand, within ABZR86_RS18680 at 161.864 kb on - strand, within ABZR86_RS18680 at 162.037 kb on + strand, within ABZR86_RS18680 at 162.236 kb on + strand at 162.237 kb on - strand at 162.237 kb on - strand at 162.237 kb on - strand at 162.237 kb on - strand at 162.251 kb on + strand at 162.380 kb on + strand, within ABZR86_RS18685 at 162.380 kb on + strand, within ABZR86_RS18685 at 162.381 kb on - strand, within ABZR86_RS18685 at 162.381 kb on - strand, within ABZR86_RS18685 at 162.381 kb on - strand, within ABZR86_RS18685 at 162.381 kb on - strand, within ABZR86_RS18685 at 162.381 kb on - strand, within ABZR86_RS18685 at 162.390 kb on - strand, within ABZR86_RS18685 at 162.390 kb on - strand, within ABZR86_RS18685 at 162.390 kb on - strand, within ABZR86_RS18685 at 162.797 kb on + strand, within ABZR86_RS18685 at 162.797 kb on + strand, within ABZR86_RS18685 at 162.797 kb on + strand, within ABZR86_RS18685 at 162.798 kb on - strand, within ABZR86_RS18685 at 162.798 kb on - strand, within ABZR86_RS18685 at 162.798 kb on - strand, within ABZR86_RS18685 at 162.798 kb on - strand, within ABZR86_RS18685 at 162.798 kb on - strand, within ABZR86_RS18685 at 162.798 kb on - strand, within ABZR86_RS18685 at 162.860 kb on + strand, within ABZR86_RS18685 at 162.860 kb on + strand, within ABZR86_RS18685 at 162.861 kb on - strand, within ABZR86_RS18685 at 162.861 kb on - strand, within ABZR86_RS18685 at 162.861 kb on - strand, within ABZR86_RS18685
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 160,650 + ABZR86_RS18675 0.41 -0.4 160,881 + ABZR86_RS18675 0.61 -0.6 160,881 + ABZR86_RS18675 0.61 -2.0 160,882 - ABZR86_RS18675 0.61 -1.1 160,965 + ABZR86_RS18675 0.68 -1.1 160,966 - ABZR86_RS18675 0.68 -0.6 161,068 - ABZR86_RS18675 0.77 -3.0 161,068 - ABZR86_RS18675 0.77 -3.2 161,379 + -0.5 161,379 + -0.5 161,379 + +0.5 161,380 - -0.1 161,380 - +1.7 161,380 - -0.7 161,412 - +0.1 161,412 - -0.1 161,470 + +0.2 161,471 - +0.2 161,471 - -1.6 161,471 - +0.2 161,528 - +1.0 161,555 - +0.5 161,555 - -0.4 161,561 + +0.5 161,594 - ABZR86_RS18680 0.13 +0.6 161,651 - ABZR86_RS18680 0.22 -0.8 161,734 + ABZR86_RS18680 0.34 +0.5 161,734 + ABZR86_RS18680 0.34 -0.5 161,734 + ABZR86_RS18680 0.34 +1.5 161,735 - ABZR86_RS18680 0.34 -0.5 161,735 - ABZR86_RS18680 0.34 +1.0 161,735 - ABZR86_RS18680 0.34 +1.6 161,863 + ABZR86_RS18680 0.54 +0.7 161,864 - ABZR86_RS18680 0.54 -0.3 161,864 - ABZR86_RS18680 0.54 +0.3 162,037 + ABZR86_RS18680 0.80 +0.6 162,236 + +0.7 162,237 - +0.4 162,237 - +0.1 162,237 - -0.6 162,237 - +0.5 162,251 + +0.4 162,380 + ABZR86_RS18685 0.13 -1.4 162,380 + ABZR86_RS18685 0.13 +0.3 162,381 - ABZR86_RS18685 0.13 +0.2 162,381 - ABZR86_RS18685 0.13 -0.9 162,381 - ABZR86_RS18685 0.13 +0.1 162,381 - ABZR86_RS18685 0.13 +0.0 162,381 - ABZR86_RS18685 0.13 -0.1 162,390 - ABZR86_RS18685 0.14 +0.0 162,390 - ABZR86_RS18685 0.14 +0.3 162,390 - ABZR86_RS18685 0.14 +0.1 162,797 + ABZR86_RS18685 0.50 +0.2 162,797 + ABZR86_RS18685 0.50 -0.7 162,797 + ABZR86_RS18685 0.50 +0.3 162,798 - ABZR86_RS18685 0.50 -0.0 162,798 - ABZR86_RS18685 0.50 -0.4 162,798 - ABZR86_RS18685 0.50 -0.3 162,798 - ABZR86_RS18685 0.50 +0.2 162,798 - ABZR86_RS18685 0.50 -0.4 162,798 - ABZR86_RS18685 0.50 +1.2 162,860 + ABZR86_RS18685 0.56 -0.4 162,860 + ABZR86_RS18685 0.56 -0.1 162,861 - ABZR86_RS18685 0.56 +0.8 162,861 - ABZR86_RS18685 0.56 -0.2 162,861 - ABZR86_RS18685 0.56 -1.4
Or see this region's nucleotide sequence