Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS16570 and ABZR86_RS16575 are separated by 5 nucleotides ABZR86_RS16575 and ABZR86_RS16580 are separated by 58 nucleotides ABZR86_RS16580 and ABZR86_RS16585 are separated by 18 nucleotides ABZR86_RS16585 and ABZR86_RS16590 are separated by 307 nucleotides
ABZR86_RS16570: ABZR86_RS16570 - glutathione S-transferase family protein, at 3,741,483 to 3,742,169
_RS16570
ABZR86_RS16575: ABZR86_RS16575 - hypothetical protein, at 3,742,175 to 3,742,717
_RS16575
ABZR86_RS16580: ABZR86_RS16580 - Pr6Pr family membrane protein, at 3,742,776 to 3,743,435
_RS16580
ABZR86_RS16585: ABZR86_RS16585 - TMEM175 family protein, at 3,743,454 to 3,744,095
_RS16585
ABZR86_RS16590: ABZR86_RS16590 - RHS repeat-associated core domain-containing protein, at 3,744,403 to 3,745,272
_RS16590
Position (kb)
3742
3743
3744 Strain fitness (log2 ratio)
-2
-1
0
1 at 3741.966 kb on + strand, within ABZR86_RS16570 at 3741.982 kb on - strand, within ABZR86_RS16570 at 3741.996 kb on + strand, within ABZR86_RS16570 at 3741.996 kb on + strand, within ABZR86_RS16570 at 3741.997 kb on - strand, within ABZR86_RS16570 at 3741.997 kb on - strand, within ABZR86_RS16570 at 3741.997 kb on - strand, within ABZR86_RS16570 at 3742.071 kb on + strand, within ABZR86_RS16570 at 3742.071 kb on + strand, within ABZR86_RS16570 at 3742.177 kb on - strand at 3742.288 kb on - strand, within ABZR86_RS16575 at 3742.352 kb on - strand, within ABZR86_RS16575 at 3742.711 kb on + strand at 3742.712 kb on - strand at 3742.936 kb on + strand, within ABZR86_RS16580 at 3742.937 kb on - strand, within ABZR86_RS16580 at 3742.969 kb on + strand, within ABZR86_RS16580 at 3742.978 kb on + strand, within ABZR86_RS16580 at 3742.979 kb on - strand, within ABZR86_RS16580 at 3743.054 kb on - strand, within ABZR86_RS16580 at 3743.273 kb on + strand, within ABZR86_RS16580 at 3743.274 kb on - strand, within ABZR86_RS16580 at 3743.290 kb on + strand, within ABZR86_RS16580 at 3743.312 kb on + strand, within ABZR86_RS16580 at 3743.313 kb on - strand, within ABZR86_RS16580 at 3743.509 kb on + strand at 3743.510 kb on - strand at 3743.510 kb on - strand at 3743.666 kb on - strand, within ABZR86_RS16585 at 3743.735 kb on - strand, within ABZR86_RS16585 at 3743.735 kb on - strand, within ABZR86_RS16585 at 3743.849 kb on - strand, within ABZR86_RS16585 at 3743.849 kb on - strand, within ABZR86_RS16585 at 3743.962 kb on + strand, within ABZR86_RS16585 at 3743.962 kb on + strand, within ABZR86_RS16585 at 3743.963 kb on - strand, within ABZR86_RS16585 at 3743.963 kb on - strand, within ABZR86_RS16585 at 3744.139 kb on + strand at 3744.217 kb on - strand at 3744.251 kb on + strand at 3744.251 kb on + strand at 3744.345 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 3,741,966 + ABZR86_RS16570 0.70 -1.0 3,741,982 - ABZR86_RS16570 0.73 +1.2 3,741,996 + ABZR86_RS16570 0.75 -2.0 3,741,996 + ABZR86_RS16570 0.75 +0.1 3,741,997 - ABZR86_RS16570 0.75 +0.2 3,741,997 - ABZR86_RS16570 0.75 +0.5 3,741,997 - ABZR86_RS16570 0.75 -1.8 3,742,071 + ABZR86_RS16570 0.86 +0.3 3,742,071 + ABZR86_RS16570 0.86 +0.6 3,742,177 - -0.0 3,742,288 - ABZR86_RS16575 0.21 -0.3 3,742,352 - ABZR86_RS16575 0.33 +0.6 3,742,711 + +0.1 3,742,712 - +0.8 3,742,936 + ABZR86_RS16580 0.24 -0.4 3,742,937 - ABZR86_RS16580 0.24 +0.7 3,742,969 + ABZR86_RS16580 0.29 +0.4 3,742,978 + ABZR86_RS16580 0.31 +0.2 3,742,979 - ABZR86_RS16580 0.31 -0.1 3,743,054 - ABZR86_RS16580 0.42 +0.6 3,743,273 + ABZR86_RS16580 0.75 +0.4 3,743,274 - ABZR86_RS16580 0.75 +0.3 3,743,290 + ABZR86_RS16580 0.78 +0.2 3,743,312 + ABZR86_RS16580 0.81 -0.6 3,743,313 - ABZR86_RS16580 0.81 +0.2 3,743,509 + -2.0 3,743,510 - +0.5 3,743,510 - +0.6 3,743,666 - ABZR86_RS16585 0.33 +0.2 3,743,735 - ABZR86_RS16585 0.44 -0.6 3,743,735 - ABZR86_RS16585 0.44 -0.2 3,743,849 - ABZR86_RS16585 0.62 +0.3 3,743,849 - ABZR86_RS16585 0.62 -0.3 3,743,962 + ABZR86_RS16585 0.79 +0.8 3,743,962 + ABZR86_RS16585 0.79 -0.3 3,743,963 - ABZR86_RS16585 0.79 -1.6 3,743,963 - ABZR86_RS16585 0.79 +0.5 3,744,139 + +0.2 3,744,217 - -0.1 3,744,251 + -0.1 3,744,251 + -0.8 3,744,345 + +0.0
Or see this region's nucleotide sequence