Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS15775

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS15770 and ABZR86_RS15775 are separated by 67 nucleotidesABZR86_RS15775 and ABZR86_RS15780 overlap by 4 nucleotides ABZR86_RS15770: ABZR86_RS15770 - aminopeptidase N, at 3,550,757 to 3,553,408 _RS15770 ABZR86_RS15775: ABZR86_RS15775 - aldose 1-epimerase, at 3,553,476 to 3,554,516 _RS15775 ABZR86_RS15780: ABZR86_RS15780 - pyridoxal-phosphate dependent enzyme, at 3,554,513 to 3,555,460 _RS15780 Position (kb) 3553 3554 3555Strain fitness (log2 ratio) -3 -2 -1 0 1at 3552.483 kb on + strand, within ABZR86_RS15770at 3552.483 kb on + strand, within ABZR86_RS15770at 3552.484 kb on - strand, within ABZR86_RS15770at 3552.484 kb on - strand, within ABZR86_RS15770at 3552.484 kb on - strand, within ABZR86_RS15770at 3552.555 kb on + strand, within ABZR86_RS15770at 3552.555 kb on + strand, within ABZR86_RS15770at 3552.556 kb on - strand, within ABZR86_RS15770at 3552.556 kb on - strand, within ABZR86_RS15770at 3552.602 kb on - strand, within ABZR86_RS15770at 3552.645 kb on + strand, within ABZR86_RS15770at 3552.646 kb on - strand, within ABZR86_RS15770at 3552.646 kb on - strand, within ABZR86_RS15770at 3552.646 kb on - strand, within ABZR86_RS15770at 3552.646 kb on - strand, within ABZR86_RS15770at 3552.646 kb on - strand, within ABZR86_RS15770at 3552.657 kb on + strand, within ABZR86_RS15770at 3552.658 kb on - strand, within ABZR86_RS15770at 3552.777 kb on + strand, within ABZR86_RS15770at 3552.778 kb on - strand, within ABZR86_RS15770at 3552.825 kb on + strand, within ABZR86_RS15770at 3552.826 kb on - strand, within ABZR86_RS15770at 3552.826 kb on - strand, within ABZR86_RS15770at 3552.958 kb on - strand, within ABZR86_RS15770at 3552.997 kb on + strand, within ABZR86_RS15770at 3552.997 kb on + strand, within ABZR86_RS15770at 3552.997 kb on + strand, within ABZR86_RS15770at 3553.062 kb on + strand, within ABZR86_RS15770at 3553.062 kb on + strand, within ABZR86_RS15770at 3553.062 kb on + strand, within ABZR86_RS15770at 3553.063 kb on - strand, within ABZR86_RS15770at 3553.063 kb on - strand, within ABZR86_RS15770at 3553.063 kb on - strand, within ABZR86_RS15770at 3553.063 kb on - strand, within ABZR86_RS15770at 3553.063 kb on - strand, within ABZR86_RS15770at 3553.359 kb on + strandat 3553.443 kb on + strandat 3553.521 kb on + strandat 3553.522 kb on - strandat 3553.761 kb on + strand, within ABZR86_RS15775at 3553.762 kb on - strand, within ABZR86_RS15775at 3553.938 kb on + strand, within ABZR86_RS15775at 3553.968 kb on + strand, within ABZR86_RS15775at 3553.968 kb on + strand, within ABZR86_RS15775at 3553.968 kb on + strand, within ABZR86_RS15775at 3553.969 kb on - strand, within ABZR86_RS15775at 3554.058 kb on + strand, within ABZR86_RS15775at 3554.058 kb on + strand, within ABZR86_RS15775at 3554.058 kb on + strand, within ABZR86_RS15775at 3554.059 kb on - strand, within ABZR86_RS15775at 3554.059 kb on - strand, within ABZR86_RS15775at 3554.059 kb on - strand, within ABZR86_RS15775at 3554.059 kb on - strand, within ABZR86_RS15775at 3554.059 kb on - strand, within ABZR86_RS15775at 3554.139 kb on + strand, within ABZR86_RS15775at 3554.139 kb on + strand, within ABZR86_RS15775at 3554.139 kb on + strand, within ABZR86_RS15775at 3554.139 kb on + strand, within ABZR86_RS15775at 3554.140 kb on - strand, within ABZR86_RS15775at 3554.140 kb on - strand, within ABZR86_RS15775at 3554.244 kb on + strand, within ABZR86_RS15775at 3554.244 kb on + strand, within ABZR86_RS15775at 3554.244 kb on + strand, within ABZR86_RS15775at 3554.244 kb on + strand, within ABZR86_RS15775at 3554.244 kb on + strand, within ABZR86_RS15775at 3554.245 kb on - strand, within ABZR86_RS15775at 3554.245 kb on - strand, within ABZR86_RS15775at 3554.283 kb on - strand, within ABZR86_RS15775at 3554.355 kb on - strand, within ABZR86_RS15775at 3554.570 kb on + strandat 3554.571 kb on - strandat 3554.957 kb on + strand, within ABZR86_RS15780at 3555.116 kb on + strand, within ABZR86_RS15780at 3555.116 kb on + strand, within ABZR86_RS15780at 3555.117 kb on - strand, within ABZR86_RS15780at 3555.117 kb on - strand, within ABZR86_RS15780at 3555.117 kb on - strand, within ABZR86_RS15780at 3555.117 kb on - strand, within ABZR86_RS15780at 3555.459 kb on - strandat 3555.463 kb on + strandat 3555.463 kb on + strandat 3555.463 kb on + strandat 3555.463 kb on + strandat 3555.464 kb on - strandat 3555.464 kb on - strandat 3555.464 kb on - strandat 3555.464 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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3,552,483 + ABZR86_RS15770 0.65 -0.1
3,552,483 + ABZR86_RS15770 0.65 +0.9
3,552,484 - ABZR86_RS15770 0.65 +0.5
3,552,484 - ABZR86_RS15770 0.65 -0.0
3,552,484 - ABZR86_RS15770 0.65 +0.1
3,552,555 + ABZR86_RS15770 0.68 -0.0
3,552,555 + ABZR86_RS15770 0.68 +0.2
3,552,556 - ABZR86_RS15770 0.68 -1.1
3,552,556 - ABZR86_RS15770 0.68 -0.3
3,552,602 - ABZR86_RS15770 0.70 +0.8
3,552,645 + ABZR86_RS15770 0.71 +0.7
3,552,646 - ABZR86_RS15770 0.71 +0.2
3,552,646 - ABZR86_RS15770 0.71 +0.0
3,552,646 - ABZR86_RS15770 0.71 -0.7
3,552,646 - ABZR86_RS15770 0.71 +0.8
3,552,646 - ABZR86_RS15770 0.71 -0.5
3,552,657 + ABZR86_RS15770 0.72 +0.5
3,552,658 - ABZR86_RS15770 0.72 -0.1
3,552,777 + ABZR86_RS15770 0.76 -0.3
3,552,778 - ABZR86_RS15770 0.76 +0.4
3,552,825 + ABZR86_RS15770 0.78 -0.4
3,552,826 - ABZR86_RS15770 0.78 -0.2
3,552,826 - ABZR86_RS15770 0.78 -0.5
3,552,958 - ABZR86_RS15770 0.83 +0.2
3,552,997 + ABZR86_RS15770 0.84 -0.5
3,552,997 + ABZR86_RS15770 0.84 -0.2
3,552,997 + ABZR86_RS15770 0.84 +0.1
3,553,062 + ABZR86_RS15770 0.87 -1.1
3,553,062 + ABZR86_RS15770 0.87 +0.1
3,553,062 + ABZR86_RS15770 0.87 -0.3
3,553,063 - ABZR86_RS15770 0.87 -0.3
3,553,063 - ABZR86_RS15770 0.87 -0.2
3,553,063 - ABZR86_RS15770 0.87 -1.1
3,553,063 - ABZR86_RS15770 0.87 -0.0
3,553,063 - ABZR86_RS15770 0.87 +0.9
3,553,359 + -0.4
3,553,443 + -0.0
3,553,521 + +1.0
3,553,522 - -1.1
3,553,761 + ABZR86_RS15775 0.27 -3.1
3,553,762 - ABZR86_RS15775 0.27 -1.0
3,553,938 + ABZR86_RS15775 0.44 +0.3
3,553,968 + ABZR86_RS15775 0.47 +0.2
3,553,968 + ABZR86_RS15775 0.47 +0.7
3,553,968 + ABZR86_RS15775 0.47 -0.4
3,553,969 - ABZR86_RS15775 0.47 +1.6
3,554,058 + ABZR86_RS15775 0.56 -0.4
3,554,058 + ABZR86_RS15775 0.56 -0.6
3,554,058 + ABZR86_RS15775 0.56 +0.5
3,554,059 - ABZR86_RS15775 0.56 -1.0
3,554,059 - ABZR86_RS15775 0.56 -0.1
3,554,059 - ABZR86_RS15775 0.56 -0.5
3,554,059 - ABZR86_RS15775 0.56 -0.7
3,554,059 - ABZR86_RS15775 0.56 +0.1
3,554,139 + ABZR86_RS15775 0.64 -0.3
3,554,139 + ABZR86_RS15775 0.64 +0.4
3,554,139 + ABZR86_RS15775 0.64 +1.0
3,554,139 + ABZR86_RS15775 0.64 -0.5
3,554,140 - ABZR86_RS15775 0.64 -0.1
3,554,140 - ABZR86_RS15775 0.64 -0.1
3,554,244 + ABZR86_RS15775 0.74 -0.1
3,554,244 + ABZR86_RS15775 0.74 -0.6
3,554,244 + ABZR86_RS15775 0.74 -0.7
3,554,244 + ABZR86_RS15775 0.74 +0.4
3,554,244 + ABZR86_RS15775 0.74 -0.7
3,554,245 - ABZR86_RS15775 0.74 -2.1
3,554,245 - ABZR86_RS15775 0.74 -0.7
3,554,283 - ABZR86_RS15775 0.78 -1.7
3,554,355 - ABZR86_RS15775 0.84 +0.2
3,554,570 + -1.2
3,554,571 - +0.3
3,554,957 + ABZR86_RS15780 0.47 -0.3
3,555,116 + ABZR86_RS15780 0.64 +1.0
3,555,116 + ABZR86_RS15780 0.64 -0.2
3,555,117 - ABZR86_RS15780 0.64 -0.0
3,555,117 - ABZR86_RS15780 0.64 -0.9
3,555,117 - ABZR86_RS15780 0.64 +0.6
3,555,117 - ABZR86_RS15780 0.64 +0.1
3,555,459 - -0.2
3,555,463 + -0.1
3,555,463 + +0.4
3,555,463 + +0.4
3,555,463 + -0.1
3,555,464 - +0.6
3,555,464 - -0.9
3,555,464 - -0.2
3,555,464 - +0.2

Or see this region's nucleotide sequence