Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS03530

Experiment: L-Arginine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntABZR86_RS03525 and ABZR86_RS03530 overlap by 4 nucleotidesABZR86_RS03530 and ABZR86_RS03535 are separated by 301 nucleotides ABZR86_RS03525: ABZR86_RS03525 - xanthine dehydrogenase family protein molybdopterin-binding subunit, at 752,977 to 755,247 _RS03525 ABZR86_RS03530: ABZR86_RS03530 - cytochrome c, at 755,244 to 756,569 _RS03530 ABZR86_RS03535: ABZR86_RS03535 - GTP 3',8-cyclase MoaA, at 756,871 to 757,854 _RS03535 Position (kb) 755 756 757Strain fitness (log2 ratio) -2 -1 0 1at 754.321 kb on + strand, within ABZR86_RS03525at 754.321 kb on + strand, within ABZR86_RS03525at 754.321 kb on + strand, within ABZR86_RS03525at 754.321 kb on + strand, within ABZR86_RS03525at 754.324 kb on + strand, within ABZR86_RS03525at 754.324 kb on + strand, within ABZR86_RS03525at 754.324 kb on + strand, within ABZR86_RS03525at 754.324 kb on + strand, within ABZR86_RS03525at 754.324 kb on + strand, within ABZR86_RS03525at 754.324 kb on + strand, within ABZR86_RS03525at 754.324 kb on + strand, within ABZR86_RS03525at 754.324 kb on + strand, within ABZR86_RS03525at 754.325 kb on - strand, within ABZR86_RS03525at 754.325 kb on - strand, within ABZR86_RS03525at 754.491 kb on + strand, within ABZR86_RS03525at 754.492 kb on - strand, within ABZR86_RS03525at 754.577 kb on + strand, within ABZR86_RS03525at 754.577 kb on + strand, within ABZR86_RS03525at 754.577 kb on + strand, within ABZR86_RS03525at 754.577 kb on + strand, within ABZR86_RS03525at 754.577 kb on + strand, within ABZR86_RS03525at 754.578 kb on - strand, within ABZR86_RS03525at 754.578 kb on - strand, within ABZR86_RS03525at 754.578 kb on - strand, within ABZR86_RS03525at 754.639 kb on + strand, within ABZR86_RS03525at 754.639 kb on + strand, within ABZR86_RS03525at 754.639 kb on + strand, within ABZR86_RS03525at 754.639 kb on + strand, within ABZR86_RS03525at 754.640 kb on - strand, within ABZR86_RS03525at 754.777 kb on + strand, within ABZR86_RS03525at 754.777 kb on + strand, within ABZR86_RS03525at 754.778 kb on - strand, within ABZR86_RS03525at 754.878 kb on + strand, within ABZR86_RS03525at 754.933 kb on + strand, within ABZR86_RS03525at 755.143 kb on + strandat 755.314 kb on - strandat 755.314 kb on - strandat 755.415 kb on + strand, within ABZR86_RS03530at 755.415 kb on + strand, within ABZR86_RS03530at 755.472 kb on + strand, within ABZR86_RS03530at 755.472 kb on + strand, within ABZR86_RS03530at 755.472 kb on + strand, within ABZR86_RS03530at 755.472 kb on + strand, within ABZR86_RS03530at 755.472 kb on + strand, within ABZR86_RS03530at 755.472 kb on + strand, within ABZR86_RS03530at 755.473 kb on - strand, within ABZR86_RS03530at 755.473 kb on - strand, within ABZR86_RS03530at 755.473 kb on - strand, within ABZR86_RS03530at 755.473 kb on - strand, within ABZR86_RS03530at 755.475 kb on - strand, within ABZR86_RS03530at 755.514 kb on + strand, within ABZR86_RS03530at 755.514 kb on + strand, within ABZR86_RS03530at 755.515 kb on - strand, within ABZR86_RS03530at 755.515 kb on - strand, within ABZR86_RS03530at 755.515 kb on - strand, within ABZR86_RS03530at 755.515 kb on - strand, within ABZR86_RS03530at 755.515 kb on - strand, within ABZR86_RS03530at 755.515 kb on - strand, within ABZR86_RS03530at 755.515 kb on - strand, within ABZR86_RS03530at 755.525 kb on + strand, within ABZR86_RS03530at 755.526 kb on - strand, within ABZR86_RS03530at 755.622 kb on + strand, within ABZR86_RS03530at 755.622 kb on + strand, within ABZR86_RS03530at 755.623 kb on - strand, within ABZR86_RS03530at 755.623 kb on - strand, within ABZR86_RS03530at 755.638 kb on - strand, within ABZR86_RS03530at 755.646 kb on + strand, within ABZR86_RS03530at 755.647 kb on - strand, within ABZR86_RS03530at 755.647 kb on - strand, within ABZR86_RS03530at 755.647 kb on - strand, within ABZR86_RS03530at 755.648 kb on + strand, within ABZR86_RS03530at 755.648 kb on + strand, within ABZR86_RS03530at 755.688 kb on + strand, within ABZR86_RS03530at 755.688 kb on + strand, within ABZR86_RS03530at 755.688 kb on + strand, within ABZR86_RS03530at 755.689 kb on - strand, within ABZR86_RS03530at 755.689 kb on - strand, within ABZR86_RS03530at 755.689 kb on - strand, within ABZR86_RS03530at 755.689 kb on - strand, within ABZR86_RS03530at 755.850 kb on + strand, within ABZR86_RS03530at 755.851 kb on - strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.907 kb on + strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.908 kb on - strand, within ABZR86_RS03530at 755.944 kb on + strand, within ABZR86_RS03530at 755.944 kb on + strand, within ABZR86_RS03530at 755.945 kb on - strand, within ABZR86_RS03530at 755.964 kb on + strand, within ABZR86_RS03530at 755.964 kb on + strand, within ABZR86_RS03530at 755.964 kb on + strand, within ABZR86_RS03530at 755.964 kb on + strand, within ABZR86_RS03530at 755.964 kb on + strand, within ABZR86_RS03530at 755.965 kb on - strand, within ABZR86_RS03530at 755.965 kb on - strand, within ABZR86_RS03530at 755.965 kb on - strand, within ABZR86_RS03530at 755.966 kb on + strand, within ABZR86_RS03530at 755.966 kb on + strand, within ABZR86_RS03530at 755.966 kb on + strand, within ABZR86_RS03530at 755.967 kb on - strand, within ABZR86_RS03530at 755.967 kb on - strand, within ABZR86_RS03530at 755.967 kb on - strand, within ABZR86_RS03530at 755.988 kb on + strand, within ABZR86_RS03530at 755.988 kb on + strand, within ABZR86_RS03530at 755.988 kb on + strand, within ABZR86_RS03530at 755.988 kb on + strand, within ABZR86_RS03530at 755.988 kb on + strand, within ABZR86_RS03530at 755.988 kb on + strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 755.989 kb on - strand, within ABZR86_RS03530at 756.027 kb on + strand, within ABZR86_RS03530at 756.027 kb on + strand, within ABZR86_RS03530at 756.028 kb on - strand, within ABZR86_RS03530at 756.028 kb on - strand, within ABZR86_RS03530at 756.093 kb on + strand, within ABZR86_RS03530at 756.093 kb on + strand, within ABZR86_RS03530at 756.093 kb on + strand, within ABZR86_RS03530at 756.093 kb on + strand, within ABZR86_RS03530at 756.094 kb on - strand, within ABZR86_RS03530at 756.094 kb on - strand, within ABZR86_RS03530at 756.094 kb on - strand, within ABZR86_RS03530at 756.105 kb on + strand, within ABZR86_RS03530at 756.105 kb on + strand, within ABZR86_RS03530at 756.105 kb on + strand, within ABZR86_RS03530at 756.106 kb on - strand, within ABZR86_RS03530at 756.106 kb on - strand, within ABZR86_RS03530at 756.106 kb on - strand, within ABZR86_RS03530at 756.141 kb on + strand, within ABZR86_RS03530at 756.141 kb on + strand, within ABZR86_RS03530at 756.141 kb on + strand, within ABZR86_RS03530at 756.142 kb on - strand, within ABZR86_RS03530at 756.142 kb on - strand, within ABZR86_RS03530at 756.142 kb on - strand, within ABZR86_RS03530at 756.462 kb on + strandat 756.462 kb on + strandat 756.462 kb on + strandat 756.463 kb on - strandat 756.463 kb on - strandat 756.463 kb on - strandat 756.463 kb on - strandat 756.463 kb on - strandat 756.463 kb on - strandat 756.463 kb on - strandat 756.465 kb on - strandat 756.567 kb on + strandat 756.567 kb on + strandat 756.567 kb on + strandat 756.568 kb on - strandat 756.568 kb on - strandat 756.568 kb on - strandat 756.568 kb on - strandat 756.568 kb on - strandat 756.723 kb on + strandat 756.723 kb on + strandat 756.724 kb on - strandat 756.724 kb on - strandat 756.724 kb on - strandat 756.772 kb on + strandat 756.772 kb on + strandat 756.772 kb on + strandat 756.789 kb on - strandat 756.893 kb on - strandat 756.893 kb on - strandat 756.910 kb on + strandat 756.910 kb on + strandat 756.955 kb on + strandat 756.955 kb on + strandat 756.955 kb on + strandat 756.955 kb on + strandat 756.955 kb on + strandat 756.956 kb on - strandat 756.956 kb on - strandat 756.956 kb on - strandat 756.956 kb on - strandat 757.402 kb on + strand, within ABZR86_RS03535at 757.403 kb on - strand, within ABZR86_RS03535

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
remove
754,321 + ABZR86_RS03525 0.59 +0.1
754,321 + ABZR86_RS03525 0.59 -0.1
754,321 + ABZR86_RS03525 0.59 +0.6
754,321 + ABZR86_RS03525 0.59 -0.2
754,324 + ABZR86_RS03525 0.59 -0.2
754,324 + ABZR86_RS03525 0.59 +0.2
754,324 + ABZR86_RS03525 0.59 -0.2
754,324 + ABZR86_RS03525 0.59 -0.4
754,324 + ABZR86_RS03525 0.59 -1.1
754,324 + ABZR86_RS03525 0.59 +0.7
754,324 + ABZR86_RS03525 0.59 +0.8
754,324 + ABZR86_RS03525 0.59 -1.1
754,325 - ABZR86_RS03525 0.59 -0.4
754,325 - ABZR86_RS03525 0.59 -0.4
754,491 + ABZR86_RS03525 0.67 +1.2
754,492 - ABZR86_RS03525 0.67 +0.4
754,577 + ABZR86_RS03525 0.70 -0.5
754,577 + ABZR86_RS03525 0.70 -1.4
754,577 + ABZR86_RS03525 0.70 +0.5
754,577 + ABZR86_RS03525 0.70 -0.6
754,577 + ABZR86_RS03525 0.70 +0.1
754,578 - ABZR86_RS03525 0.70 +0.3
754,578 - ABZR86_RS03525 0.70 -0.2
754,578 - ABZR86_RS03525 0.70 -0.2
754,639 + ABZR86_RS03525 0.73 +0.1
754,639 + ABZR86_RS03525 0.73 +0.4
754,639 + ABZR86_RS03525 0.73 -0.9
754,639 + ABZR86_RS03525 0.73 +0.1
754,640 - ABZR86_RS03525 0.73 +0.4
754,777 + ABZR86_RS03525 0.79 -0.2
754,777 + ABZR86_RS03525 0.79 +0.3
754,778 - ABZR86_RS03525 0.79 -1.3
754,878 + ABZR86_RS03525 0.84 -0.1
754,933 + ABZR86_RS03525 0.86 +0.1
755,143 + +0.1
755,314 - -0.3
755,314 - +0.2
755,415 + ABZR86_RS03530 0.13 -1.1
755,415 + ABZR86_RS03530 0.13 +0.5
755,472 + ABZR86_RS03530 0.17 -0.8
755,472 + ABZR86_RS03530 0.17 +0.2
755,472 + ABZR86_RS03530 0.17 -0.3
755,472 + ABZR86_RS03530 0.17 -0.5
755,472 + ABZR86_RS03530 0.17 -1.1
755,472 + ABZR86_RS03530 0.17 +0.4
755,473 - ABZR86_RS03530 0.17 -0.7
755,473 - ABZR86_RS03530 0.17 +0.4
755,473 - ABZR86_RS03530 0.17 -0.5
755,473 - ABZR86_RS03530 0.17 +0.1
755,475 - ABZR86_RS03530 0.17 +0.2
755,514 + ABZR86_RS03530 0.20 +0.4
755,514 + ABZR86_RS03530 0.20 +0.4
755,515 - ABZR86_RS03530 0.20 -0.1
755,515 - ABZR86_RS03530 0.20 -0.5
755,515 - ABZR86_RS03530 0.20 +0.2
755,515 - ABZR86_RS03530 0.20 -1.0
755,515 - ABZR86_RS03530 0.20 -0.3
755,515 - ABZR86_RS03530 0.20 -0.2
755,515 - ABZR86_RS03530 0.20 +0.1
755,525 + ABZR86_RS03530 0.21 +0.0
755,526 - ABZR86_RS03530 0.21 +0.0
755,622 + ABZR86_RS03530 0.29 +0.4
755,622 + ABZR86_RS03530 0.29 -0.2
755,623 - ABZR86_RS03530 0.29 -1.0
755,623 - ABZR86_RS03530 0.29 +0.2
755,638 - ABZR86_RS03530 0.30 +0.1
755,646 + ABZR86_RS03530 0.30 +0.2
755,647 - ABZR86_RS03530 0.30 +0.0
755,647 - ABZR86_RS03530 0.30 -0.8
755,647 - ABZR86_RS03530 0.30 +0.4
755,648 + ABZR86_RS03530 0.30 -0.2
755,648 + ABZR86_RS03530 0.30 -1.7
755,688 + ABZR86_RS03530 0.33 +0.5
755,688 + ABZR86_RS03530 0.33 +0.2
755,688 + ABZR86_RS03530 0.33 -0.2
755,689 - ABZR86_RS03530 0.34 +0.3
755,689 - ABZR86_RS03530 0.34 +0.9
755,689 - ABZR86_RS03530 0.34 -0.2
755,689 - ABZR86_RS03530 0.34 +0.1
755,850 + ABZR86_RS03530 0.46 +0.1
755,851 - ABZR86_RS03530 0.46 +0.0
755,907 + ABZR86_RS03530 0.50 +0.1
755,907 + ABZR86_RS03530 0.50 -0.8
755,907 + ABZR86_RS03530 0.50 +0.4
755,907 + ABZR86_RS03530 0.50 -0.6
755,907 + ABZR86_RS03530 0.50 -1.3
755,907 + ABZR86_RS03530 0.50 +0.2
755,907 + ABZR86_RS03530 0.50 -0.2
755,908 - ABZR86_RS03530 0.50 +0.6
755,908 - ABZR86_RS03530 0.50 +0.1
755,908 - ABZR86_RS03530 0.50 -0.5
755,908 - ABZR86_RS03530 0.50 +0.6
755,908 - ABZR86_RS03530 0.50 -0.1
755,908 - ABZR86_RS03530 0.50 -0.2
755,908 - ABZR86_RS03530 0.50 +0.0
755,908 - ABZR86_RS03530 0.50 -0.2
755,944 + ABZR86_RS03530 0.53 +0.4
755,944 + ABZR86_RS03530 0.53 -0.5
755,945 - ABZR86_RS03530 0.53 -0.1
755,964 + ABZR86_RS03530 0.54 +0.1
755,964 + ABZR86_RS03530 0.54 -0.2
755,964 + ABZR86_RS03530 0.54 -0.0
755,964 + ABZR86_RS03530 0.54 -0.1
755,964 + ABZR86_RS03530 0.54 +0.2
755,965 - ABZR86_RS03530 0.54 +0.4
755,965 - ABZR86_RS03530 0.54 -1.6
755,965 - ABZR86_RS03530 0.54 +1.6
755,966 + ABZR86_RS03530 0.54 -1.5
755,966 + ABZR86_RS03530 0.54 +0.4
755,966 + ABZR86_RS03530 0.54 +0.2
755,967 - ABZR86_RS03530 0.55 -0.1
755,967 - ABZR86_RS03530 0.55 +0.1
755,967 - ABZR86_RS03530 0.55 +0.3
755,988 + ABZR86_RS03530 0.56 -0.6
755,988 + ABZR86_RS03530 0.56 -0.6
755,988 + ABZR86_RS03530 0.56 -0.4
755,988 + ABZR86_RS03530 0.56 -0.5
755,988 + ABZR86_RS03530 0.56 +0.8
755,988 + ABZR86_RS03530 0.56 +0.4
755,989 - ABZR86_RS03530 0.56 +0.3
755,989 - ABZR86_RS03530 0.56 +0.5
755,989 - ABZR86_RS03530 0.56 -0.1
755,989 - ABZR86_RS03530 0.56 +0.2
755,989 - ABZR86_RS03530 0.56 -1.4
755,989 - ABZR86_RS03530 0.56 -0.1
755,989 - ABZR86_RS03530 0.56 -1.9
755,989 - ABZR86_RS03530 0.56 +0.8
755,989 - ABZR86_RS03530 0.56 +1.1
756,027 + ABZR86_RS03530 0.59 +0.2
756,027 + ABZR86_RS03530 0.59 +0.3
756,028 - ABZR86_RS03530 0.59 +0.1
756,028 - ABZR86_RS03530 0.59 +0.4
756,093 + ABZR86_RS03530 0.64 -1.1
756,093 + ABZR86_RS03530 0.64 -1.2
756,093 + ABZR86_RS03530 0.64 +0.6
756,093 + ABZR86_RS03530 0.64 -0.5
756,094 - ABZR86_RS03530 0.64 +0.2
756,094 - ABZR86_RS03530 0.64 +0.0
756,094 - ABZR86_RS03530 0.64 -0.1
756,105 + ABZR86_RS03530 0.65 +0.8
756,105 + ABZR86_RS03530 0.65 -0.6
756,105 + ABZR86_RS03530 0.65 -0.1
756,106 - ABZR86_RS03530 0.65 -1.4
756,106 - ABZR86_RS03530 0.65 -0.2
756,106 - ABZR86_RS03530 0.65 -0.5
756,141 + ABZR86_RS03530 0.68 +0.0
756,141 + ABZR86_RS03530 0.68 -0.9
756,141 + ABZR86_RS03530 0.68 -0.2
756,142 - ABZR86_RS03530 0.68 -1.3
756,142 - ABZR86_RS03530 0.68 +1.0
756,142 - ABZR86_RS03530 0.68 -1.7
756,462 + -0.8
756,462 + +0.1
756,462 + -0.2
756,463 - -1.1
756,463 - -0.1
756,463 - +0.4
756,463 - -0.3
756,463 - +1.0
756,463 - -1.9
756,463 - -0.2
756,465 - -0.3
756,567 + -0.0
756,567 + +0.5
756,567 + -0.1
756,568 - +0.2
756,568 - +0.6
756,568 - +0.3
756,568 - +0.1
756,568 - -0.3
756,723 + +0.2
756,723 + -0.3
756,724 - -0.5
756,724 - -0.4
756,724 - +0.3
756,772 + -0.3
756,772 + +0.1
756,772 + -0.1
756,789 - -0.8
756,893 - -0.1
756,893 - +0.1
756,910 + +0.3
756,910 + -0.6
756,955 + +0.2
756,955 + -0.3
756,955 + -0.3
756,955 + -0.4
756,955 + +1.0
756,956 - -0.9
756,956 - -0.4
756,956 - -0.7
756,956 - +0.2
757,402 + ABZR86_RS03535 0.54 -0.6
757,403 - ABZR86_RS03535 0.54 -0.6

Or see this region's nucleotide sequence