Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4084

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,905,676	-		Shewana3_4082	0.61	+0.2
4,905,694	+		Shewana3_4082	0.63	-0.4
4,905,778	-		Shewana3_4082	0.71	+0.9
4,905,778	-		Shewana3_4082	0.71	-0.2
4,905,778	-		Shewana3_4082	0.71	+0.1
4,905,852	-		Shewana3_4082	0.79	+0.4
4,905,953	+		Shewana3_4082	0.89	-0.5
4,905,953	+		Shewana3_4082	0.89	-2.2
4,905,961	-				-0.3
4,905,961	-				-0.4
4,905,988	+				-2.7
4,905,996	-				+0.1
4,905,996	-				-0.8
4,905,996	-				-0.4
4,905,996	-				-0.2
4,906,150	+				+0.3
4,906,275	-		Shewana3_4083	0.30	-0.4
4,906,308	-		Shewana3_4083	0.37	+0.1
4,906,355	-		Shewana3_4083	0.47	+0.5
4,906,375	-		Shewana3_4083	0.52	+1.0
4,906,384	+		Shewana3_4083	0.54	+0.3
4,906,391	-		Shewana3_4083	0.55	-0.5
4,906,392	-		Shewana3_4083	0.55	+0.4
4,906,392	-		Shewana3_4083	0.55	-0.5
4,906,392	-		Shewana3_4083	0.55	+0.1
4,906,513	-		Shewana3_4083	0.82	+0.4
4,906,686	+				+0.4
4,906,703	+		Shewana3_4084	0.10	+0.2
4,906,726	-		Shewana3_4084	0.13	+1.1
4,906,726	-		Shewana3_4084	0.13	-0.3
4,906,728	+		Shewana3_4084	0.13	-0.1
4,906,817	+		Shewana3_4084	0.24	+0.6
4,906,878	+		Shewana3_4084	0.32	+0.0
4,906,900	+		Shewana3_4084	0.34	+0.6
4,907,040	-		Shewana3_4084	0.51	-0.1
4,907,148	-		Shewana3_4084	0.65	+0.0
4,907,168	-		Shewana3_4084	0.67	+1.0
4,907,256	-		Shewana3_4084	0.78	+1.5
4,907,348	+		Shewana3_4084	0.89	+0.4
4,907,358	-				-0.2
4,907,567	+				-0.3
4,907,582	-				+1.0
4,907,655	+				-0.3
4,907,793	+		Shewana3_4085	0.17	-3.2
4,907,836	-		Shewana3_4085	0.20	+0.8
4,907,843	-		Shewana3_4085	0.20	+0.2
4,907,845	+		Shewana3_4085	0.20	-1.4
4,907,913	-		Shewana3_4085	0.24	+0.4
4,907,925	-		Shewana3_4085	0.25	+0.8
4,907,925	-		Shewana3_4085	0.25	+1.2
4,907,931	-		Shewana3_4085	0.25	+0.4
4,907,982	-		Shewana3_4085	0.28	+0.2
4,907,992	-		Shewana3_4085	0.29	-0.9
4,907,992	-		Shewana3_4085	0.29	+1.1
4,908,063	+		Shewana3_4085	0.33	+0.6
4,908,204	-		Shewana3_4085	0.41	+0.5
4,908,236	-		Shewana3_4085	0.43	+0.2
4,908,316	-		Shewana3_4085	0.47	+0.3
4,908,352	-		Shewana3_4085	0.50	+0.5
4,908,408	+		Shewana3_4085	0.53	+0.0
4,908,415	-		Shewana3_4085	0.53	+0.7